Salvelinus sp. IW2-2015 (Arctic char): 111979392
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Entry
111979392 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: amyloid-beta A4 protein-like
KO
K04520
amyloid beta A4 protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111979392
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111979392
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
salp00535
]
111979392
00536 Glycosaminoglycan binding proteins [BR:
salp00536
]
111979392
Peptidases and inhibitors [BR:
salp01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
111979392
Proteoglycans [BR:
salp00535
]
Cell surface proteoglycans
Others
111979392
Glycosaminoglycan binding proteins [BR:
salp00536
]
Heparan sulfate / Heparin
Others
111979392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
HrpE
Bestrophin-like
Motif
Other DBs
NCBI-GeneID:
111979392
NCBI-ProteinID:
XP_023865670
LinkDB
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Position
LG2:37179942..37227977
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AA seq
760 aa
AA seq
DB search
MGERTAFLLLWVATLTLASEVPSDDSVGLLAEPQVAMFCGKFNMHVNVQSGKWESDPFGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVSIQSWCKKGRKKGRKECSSHTHIVVPY
RCLVGEFVSDALLVPDKCKFLHQERMDMCESHLHWHTVAKESCGDRTMNLHDYGMLLPCG
IDRFRGVEFVCCPAETQRESDSVELTESDVWWGGAETEYTDNSMPRQADQGAVTTEEDDE
EDAFDRDEDGDGLEDDNDDDDDEDDDEDDVTDERDSGEGTSNIAMTTTTTTTTESVEEVV
REVCWARAESGPCHAILERWYFVPEKGTCAPFLFGGCGGNRNNFDSEEYCLSVCSNSIPA
YHGPPPDAVDRYLEXPGDDSEHANFQRPRRVWRQARDRMSQVMREWEEAERQAKSLPRAD
KKAVIQHFQEKVEXLEQEAGERQQLVETHMARVEXLLNSRRHMALEXYLGSLPANPPGYI
YTPRQVLGLLKKYVRAEQKDRQHTLKHYEHVRMVDPKKAAQIRPQVMTHLRVIDERMNQS
LGLLFKVPSMANKIQDQVSVLMQRVQSELSQQVSSLQSDGRTDGRVSYGNDALMPDQAYS
SAPLDPGMGLDGLGFIHPESFNQPNTDNHVEPVDARPVPDRGLPTRPVSALKPEEFPEVR
VEKEERQSASYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVISLIMLRKKQYTS
IHHGIIEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagcgaacggcatttctgctgttatgggttgcgaccttgacgctggcatctgag
gtgccttctgatgactcggtgggtctgctggcagagccccaggtagccatgttctgtggg
aaattcaacatgcatgtcaatgttcagagtggcaagtgggagtcggatcccttcggcacc
aagagctgcatcggaaccaaggagggcatcctgcagtactgccaggaggtgtaccctgag
ctccagatcactaacgtggtggaggccaaccagccagtcagcattcagagctggtgcaag
aagggacgcaagaagggacgcaaggagtgtagcagtcacacacacatcgtggtgccctac
cgctgcctggttggggagtttgtgagtgatgccctgctggttcctgataagtgcaagttc
ctgcaccaggagagaatggacatgtgtgagagccacctgcactggcacaccgtggctaaa
gagtcctgcggagaccgcaccatgaatctccatgactacgggatgctgttgccatgcggc
atcgaccgtttccgaggggtggagtttgtgtgttgcccagcggagacacagcgcgagtca
gacagtgtggagctgactgagtctgatgtgtggtggggtggagccgagactgaatatacc
gataacagcatgcctcgccaggcggatcagggggctgtcaccactgaggaggatgacgaa
gaggatgcctttgacagagatgaggacggagatggtcttgaggatgataatgatgatgat
gatgatgaagacgacgatgaggatgacgtgaccgatgaacgggacagtggtgaaggcacc
tccaacatcgccatgacaaccaccaccacgaccaccactgagtcggttgaggaagtcgtc
agagaggtgtgttgggcgcgtgctgagtcgggcccgtgccatgccattctggagcgttgg
tacttcgtgccagagaagggcacctgtgcccccttcctctttggagggtgtgggggcaac
cggaataactttgactcagaggagtactgcctgtctgtctgcagcaacagtattcctgcc
taccacggccctccccctgacgcggtggaccgttacctggagnttcctggagacgacagc
gaacacgccaacttccagaggccaaggagagtctggaggcaagcacgcgacaggatgtcc
caggtgatgagagagtgggaggaagcagagagacaagccaagagtctccctcgcgctgac
aagaaggcagtcatccagcacttccaggagaaggtggagnncctggagcaggaggcagga
gagaggcagcagctggtggagacccacatggcccgggtggagnncctgctcaacagccgc
cgccacatggccctggagnaatacctcggctccctgccggccaacccaccagggtacata
tatacacctcgtcaggtgcttggcctgttgaagaagtatgtccgtgcagaacagaaggac
agacaacacacgctgaaacactacgaacacgtccgcatggtggaccccaaaaaggctgct
cagatccgaccccaggtgatgacccacctgcgtgtgattgacgagaggatgaaccaatcc
ctggggctgctcttcaaagtgcccagcatggccaacaaaatccaagaccaagtttctgtc
ctgatgcagagggttcagtcagagctgtctcagcaagtctcatctctgcagagcgatggg
aggactgatggcagggtgagctatggaaacgatgccctgatgcccgaccaggcttacagc
tctgcccctctggaccctgggatgggcctggatggactgggcttcatccacccagagagc
ttcaatcagcccaacactgacaaccacgttgagcctgttgacgctcgtccagttccagat
agaggtctgcccactcggcctgtgtctgctctgaagcctgaggagttccctgaggtgcgg
gtggagaaggaggagcggcaaagcgccagctatgaagtgcatcatcaaaaactggtgttc
tttgctgaggatgtgggctccaacaagggtgccatcatcggcctgatggtgggcggggtt
gtcatagcgacagtcatcgtcatctctctgattatgctgaggaagaagcagtatacctcc
atccaccacggaatcatcgaggtggatgctgcagtgaccccagaggagcgtcacctgtcc
aagatgcagcagaatggctatgagaaccccacctacaagttcttcgaacagatgcagaac
taa
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