Salvelinus sp. IW2-2015 (Arctic char): 111979468
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Entry
111979468 CDS
T05762
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111979468
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
111979468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
111979468
NCBI-ProteinID:
XP_023865802
LinkDB
All DBs
Position
LG19:27937973..27992170
Genome browser
AA seq
3156 aa
AA seq
DB search
MADPGMLSLFGDDANLFSDGLEGLGDCGFPQGQPNPVGQQEHQDYGSLSSNSLHHPSQAV
PGKPKMGHPYDPFAGYEQQQDNGPAVNSMVTPHSRYHNSPQQPGGGHHVYPRAQGDGHGQ
SFPDGGAAWGPQTGPGQGRPPFQQQQASAQAPSHQQHGPSGPQAPSHQQHDPSGPQDHGH
RMGPYMGRSDYATMQGHPGQTQTPPRINHFPPGMGQEPNHYMGHVGLQQNSSMTGHPAQQ
QQFLHQPGQGPVHTQDRMASHTSHQQHQGLAGRPHQNMGFNMHGQAASPGAVTSSGPYPP
YPQYSNHNQGLAGSAGMSPGMSLSSTSNNNSSASGPMGPAQVQCYPNAGGAPQRYPGPQV
HQQPVHPNQITSQPMHPSQAQATPHKQPHLPTPPHGSYGSPTSMSPMKGMGTTAVTPPPQ
QVRPPSAGLAPEVGLYPGVPLQAPNPMAPQRNTTPLGVQQPQHHPQHLSHPQQHPHMPPS
QQLYPGMSPNQRGPLDQVRPPGPMAHGEPPGPQDQRLLPPQQQAPKSGLQPPPVAFQQQV
HPAQTALPSSQAQTHLAGPHHQSSPPNQPPWAPAGHQSPPTPQKVPHIQYSTSSEMTASD
RTPASGANLQPANRDKKPTEQKPKKKKAKVMVEERVEGKKKPKKKKGGCIEECGEEGKRK
VGDSPWAEVNCLTGALEESLVVKTKKKPKEPKEPKTPKTPKTPKEPKEKAKSTTPKAKKP
RSTKKVESAEGSGSSVKETKRKRDPSVSSDVEKSPPGPSDEDDDDDSVQKRRSSRQVKRK
RYTEELEFRISDDGGDVSPSPKSPFNNSEQQEVETEGPVVEKILSIRMGKKEMESGEKME
VEEFYVKFKSFSYLHCRWADLEELEKDKRIHQKVKRFRAKQALPTFVTEMDDEPFNPDYV
EVDRVLDVSESTDENGEPVKLYLVKWCSLPYEDITWELKADIDQAKIDEYEAVAARQPET
KRVERPPTENWQKSESSRDYINDNALREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQ
SITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVIVYHGSQASRKTIQAYEMN
YRDVQGRVIKGAYKFHAVITTFEMILTDCPELRSVPWRCVVIDEAHRLKNRNCKLLEGLK
MMDMEHKVLLTGTPLQNTVEELFSLLNFLEPERFPSENTFMQEFGDLKTEEQVQKLQAIL
KPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGGPGGGGGAWG
GGGAQVPNLLNTMMELRKCCNHPYLINGAEEKILDDFRENHHAEMPQFHLQAMIQAAGKL
VLIDKLLPKLKAGGHRVLVFSQMVRCLDILEDYLIQKRYPYERIDGRVRGNLRQAAIDRF
SRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIY
RLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAANGVPQLSKKEVEDLLRKGAYGAL
MDEEDEGSKFCEEDIDQILLRRTQTITIESEGKGSTFAKASFVAAGNRTDISLEDPDFWQ
KWAKKAELDMEAINGRNTLVIDTPRVRKQTRHYSSMKEDELAEFSELESDGENEKPLTKP
RRPQDRAHGYPRSECFRVEKNLLVYGWGRWGDILSRGRFKRPLQEQDVETICRALLAYCL
LHYRGDENIKRFIWDLITPSEDGQSRTLTNHSGLSTPVPRGRKGKKGKPAPPAPPQLPRA
EWLASCNPDLLLQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVIGDQADRILEGTDSSEMD
IWIPQPFHAEVPADWWDSKADKSLLIGVFKHGYEKYNSMRADPALCFLERVGMPDAKAIA
AEQRGADMMADGPEGEDEDPEYKPLRMTFKDEMEDFANSPLDDKEETVDVESGESKPGEN
VAGSRGAGRLYWPAASALTARLRRLITAYQRTHKREQLRQEAMARPDGRRRRQPREHLFS
MVTDGGGAYVQEDGAFMTEGSPYMAKGGAFMPETTGLLAEGGAAFKERRQRWTRREESDF
YRVVSTFGVIYDTDRQRFDWTQFRAFARLDKKSDESLEKYYFSFVAMCKRVCRMQVKANT
ELPDPTLIIDPITEERASRTLYRIELLRRIREQVLPNSLLGERLRLCQPSSDLPEWWDCG
RHDYDLLLGASKHGVSRTDYHILNDPALGFLEAHRKFTKGGLAGVPQPPRDGALSTASSS
STEQATATAGAEKSLPVQEDEEGKEMKEEGNDIPCTKPEKPDEGKEEEMEAKKEEKAGSP
KKAKKEEKAGSPKKVKEEEKAGSPKKVKEEEEEDKEEEMEVNGDADGETSKEAKPEKGYK
APTEETKDQDKKLDFQEKPESPKASEEQGTKKEERDEKEGSPAKSPKPVAEKGPDEEKME
EDDKSEKSSQAEAGATSEQKNFDEESNASLSTTARDETRDGFCPEDGEPSAIPALQERTT
SSFWPKDRVMINRMDNICDAVIKGKWPANRRQFFDFPGLLPGYPGPMTSESPMPRQSLAE
LSMAAAVQTSFSGSEDLTLSPQANDDALSISLPKQRRRRRRKVEIEAERAAKRRNLMDMV
AQLRESHAAESQSQAMDLTKGILHQHHKSSAPSPASYSSSMVSPAALKAQMELLQPATPS
RHRANCSLAEADLPTRRRRGRRKNVEGLELLFMRGATEDSERTKASVEGLQMPPRSHRHN
IPSTSACVPSVSAMEDREAGTPSNKDLSDWLRQHPTYTMDMPTAYTPKSEETLLSSQFPK
PKQKRHRCRNPNKIDINTLTGEEKVPVINRRNGRKMGGAMAPPMKDLPRWLLENSDFAVA
PDWTDIVKQSGFLPEAMFDRLLTGPLVREEGVRRRGRRPKSEIAKAAAAQAASSGGLNPL
LINGLFGGMDLTSLQGLQSLQSLQLQLMGFPGMGGADAKHASAMLPLMLPGMAGMGGLPN
MFGLGGLFASNLAAATPAAASNGTNDEGDSDETSKRDAREGGQEQDEEKDDTGEEAESSK
ANGEVVALNVAAAAMAASGMSATSLAFNPFLLSTMAPGLFSPYMFLPPGLGGLTLPGFPP
TALADLQSAMAGAMGVASGAQGQEKEPGQVALDRPAAATADPETADDSDSAESLEKTAES
SALEDEASALAEEADSPEDLEAEEEGEDALEEEKSD
NT seq
9471 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccggggatgttgagcctgttcggggatgatgccaacctgttctcggacggg
ctggagggcctgggggactgtggcttcccccagggccagcccaaccccgtaggacagcag
gagcaccaggactacgggtcgctctcctccaactcactacaccacccctcgcaggccgtc
cccggaaagcccaagatgggtcacccctacgacccctttgcaggctacgagcagcagcag
gacaacggccccgccgtcaacagcatggtgaccccgcactcacgctaccacaacagcccc
caacaacccggaggggggcaccatgtctaccccagagcccaaggcgatgggcacgggcag
tccttccctgacggaggagccgcgtggggcccccagactggccccgggcagggcaggcct
ccattccagcagcaacaggcatccgcccaggccccatcccaccagcagcacggcccctct
gggccccaggccccatcccaccagcagcacgacccctcagggccccaggaccacggccac
cgtatgggcccctacatgggccggtccgactacgccactatgcagggccaccctggccag
acccagacgccacccaggatcaaccacttccctccgggcatgggccaggagcccaaccac
tacatgggccacgtggggctccagcagaactccagcatgacgggccacccggcacagcaa
cagcagtttcttcaccagcccggccagggccctgttcacacccaggaccgcatggcctcc
cacacctctcaccagcagcaccagggcttggccgggaggccacaccagaacatggggttc
aacatgcacggccaggcagcctctcctggtgctgtaaccagctcagggccgtaccccccc
tacccccagtacagcaaccataatcagggattagccggcagtgcagggatgagtcccggc
atgagcctcagcagcaccagtaacaacaacagtagcgccagcgggccaatggggccagca
caagtccagtgttaccccaacgcagggggggccccacagcgctacccgggtcctcaggta
caccagcagcctgtccaccccaaccaaatcaccagccagcccatgcacccctcccaggcc
caggccaccccccataagcagccccacctccccacaccacctcatggatcttacggctct
cccacctccatgtcccccatgaagggcatgggaaccaccgcggtcacacctccgcctcaa
caggtccgaccccctagtgcaggtcttgctcccgaggtagggttgtaccctggagtgcca
ctccaggcccctaaccccatggcccctcagagaaacaccactcccctgggcgtgcagcaa
ccgcaacatcatccccagcacctctcccacccacagcagcacccccacatgcccccgagc
cagcagctctacccgggtatgtcccccaaccagagaggccctctcgaccaggtgagacct
ccaggtcctatggcccacggtgagcctccaggaccacaggaccagcggctgctccctccc
cagcaacaggctcccaaatctgggctgcagcctcctcccgtggccttccagcagcaggtg
cacccagcccagaccgctttgccctcgtcacaggctcagacacatctggccggcccccac
caccagagctccccgcccaaccagccaccttgggcgccggcaggacaccagtcgcctcca
accccccagaaagtgcctcacattcagtattctacgtcatctgagatgacagcttctgac
aggacacccgcttcgggggcaaacctccagccagccaaccgtgacaagaagcccactgag
cagaaaccaaaaaagaagaaagcaaaggtgatggtggaggaaagagtagaggggaaaaag
aaaccaaaaaagaagaaaggaggatgtatagaggaatgtggcgaggaggggaaacgaaag
gtcggggacagtccctgggcggaggttaactgtctgacaggtgccctggaggaatcgctt
gtggtgaagacaaagaagaaaccgaaggagcctaaagagcccaagactccaaaaacaccc
aagactcccaaagagcccaaggagaaggccaagagcactacccccaaggccaagaagccc
agaagcactaagaaggtggagtcagcggagggcagtggcagcagtgtgaaggagactaag
aggaagagggacccctcggtcagctccgatgtggagaagtcacccccaggcccctccgat
gaggacgacgacgacgacagtgtccagaagcgtcgttccagtcgtcaggtgaagaggaag
cgctatacagaggaactggagttcaggatttcagacgatggtggagatgtttccccctct
cccaagtcgcccttcaacaactctgaacagcaggaggtggagacagaggggcctgtcgtg
gagaagatcctgtctatacgcatggggaagaaagagatggaatcgggagagaaaatggaa
gtggaagaattctatgtgaaattcaagagcttctcctacctgcactgtcgctgggcagat
ctggaggagctggagaaggacaaaaggatccaccagaaggtcaagcggttcagggccaag
caggccctccccaccttcgtgacagagatggatgacgagcctttcaacccagactacgtt
gaggtggaccgggtactggacgtgtcagagagcacagatgagaacggagagcctgtaaag
ctgtacctggtgaagtggtgttccctgccctatgaggatataacttgggagctgaaggcc
gacatcgaccaggccaagatcgatgagtacgaggccgtggcggcccgtcagcccgagacc
aaacgcgtggagcgacctcccaccgaaaactggcagaaatccgagagttccagggattat
ataaacgacaacgcactcagggaataccagctggagggagtgaactggttgctcttcaac
tggtacaatacacggaactgcatcctagcagatgaaatgggcctgggcaagaccatccag
tccatcacattcctctatgagatctacctgaaggggatccacgggcccttcctggtcatc
gcccccctctccaccattccaaactgggagcgggagttccgcacgtggaccgagctcaac
gtgatcgtttaccatggcagccaggccagccgcaagaccatacaggcctacgaaatgaac
taccgcgacgtgcagggtcgtgtgataaagggagcgtacaaattccatgcggtcatcacc
acatttgagatgattctgacagactgtccggagctgcgcagcgtcccgtggcgctgtgtg
gtcatcgacgaggctcaccgcctcaagaacaggaactgcaaactgctggagggtctcaag
atgatggacatggagcacaaggtgctgctgaccgggacgcccctgcagaacacggtggag
gagctcttcagtctgctcaacttcctggaaccggaacgcttcccctcggagaacaccttc
atgcaggagtttggagacctcaagactgaggagcaggtccagaagctgcaggccatcctg
aagcccatgatgctgcgacgtctcaaggaggacgtggagaagaacctggcccccaaggag
gagaccatcattgaggtggagctgaccaacatccagaagaagtactaccgggccatcctg
gagaagaacttctccttcctgtctaaaggaggaccgggaggaggaggtggcgcatgggga
ggcggaggtgcacaggtccccaacctgctcaacaccatgatggagctgaggaagtgctgc
aaccacccctacctcatcaatggtgcagaggagaagatcctggacgacttccgtgagaac
caccatgccgagatgccccaattccacctacaggccatgatccaggcagcgggcaagctg
gtgctgatcgacaagctgctgcccaagctgaaggccgggggacacagggtcctcgtcttc
tcccagatggtgcgctgcctggacatcctggaggactacctcatccagaaacggtacccg
tatgagcgtatcgacggccgtgtgaggggtaacctccggcaggctgcgatcgaccgcttc
tctcgtccggactctgaccgctttgtcttcctgctgtgtacccgggctggaggcctgggc
atcaacctgaccgctgccgacacctgcatcatctttgactcggattggaacccccagaat
gacttacaggcgcaagccagatgccacaggattggccagagcaaggcagtgaagatctac
aggctgatcaccaggaactcctatgagagggagatgtttgacaaggccagcctcaagctg
ggcctcgacaaggctgtgctgcagtccatgagtggccgagaaaacgcagccaacggggtt
ccacagctgtctaagaaggaggtggaggacctcctccgtaaaggagcctacggagctctg
atggacgaggaggacgagggctcgaagttctgcgaagaggacattgaccagatcctcctg
agacgaacccagaccatcaccattgagtccgagggcaaggggtccaccttcgccaaggcg
agttttgtggctgctgggaacaggacggacatttccctggaggacccggacttctggcag
aagtgggccaagaaggcagagctcgacatggaagccatcaatggacggaacacccttgtg
attgacactccgagggtgcggaagcagacacgccactacagctcgatgaaggaggacgaa
ttggccgagttctccgagctggaaagtgacggcgagaacgagaagcccttgaccaaaccc
aggcggccccaggaccgagctcacgggtacccccgcagcgagtgcttcagggtggagaag
aacctgctggtttatgggtggggtcgctggggagacatcctgtcccgcgggcgtttcaag
cggcccctgcaggagcaagacgtggagaccatctgccgcgccctgctggcctactgcctg
ctgcactaccgtggcgacgagaacatcaagcgcttcatctgggacctcatcacgccctct
gaggacggacagagccgcacactcaccaaccactccggtctgtctactccagtaccgcgg
ggtcgtaaggggaagaaggggaaaccagccccgcctgcccctccccagcttcccagggca
gagtggctggccagctgtaaccctgacctgctactgcaggaggacagctacaagagacac
ctcaaacaccactgtaacaaagttctactgagggtccgtatgctctactatctgcgacag
gaagtcatcggtgaccaagccgaccggatcctagagggaacagactcaagtgaaatggat
atctggatcccgcagcctttccacgccgaggtgcccgccgattggtgggacagcaaggca
gacaaatcgctgctcatcggtgtcttcaaacacggctatgagaagtataactcgatgcgt
gccgaccctgcgctgtgtttcttggagcgggtgggcatgcccgacgccaaggccatcgct
gcagagcagaggggggcggacatgatggcagatggtccggagggagaggatgaagaccca
gagtacaagcctctccgcatgacctttaaagatgagatggaggacttcgcgaactcaccc
ctggatgacaaagaggagactgtggacgttgagagtggtgaatctaaaccaggtgagaat
gtagcaggcagcagaggggcgggtcgtctgtactggccggcggcctcggccctcaccgct
agactccgccgcctcatcacggcctaccagcgcacgcacaagagggagcagctccgccag
gaagccatggcacggcccgacggacgccgccgccgccagccccgagaacatctcttctcc
atggtcacagacggaggaggggcctacgtgcaggaggacggagcattcatgacagaggga
agtccttatatggccaagggcggcgcttttatgcctgagacgacggggctcctggcggaa
ggaggggccgccttcaaagagaggcgtcagaggtggaccaggcgtgaggaatcagacttc
taccgggttgtgtccacgtttggtgtgatctatgacacggaccgccagcgctttgactgg
acccagttcagggccttcgcccggctggacaagaaaagtgacgagagcctggagaaatac
tacttctccttcgtggccatgtgcaagcgggtgtgtcgcatgcaggtcaaggccaacact
gagctcccagaccctaccctgatcatcgaccccatcacggaggaacgcgcctcacgcacc
ctctaccgcattgagctgctgcgtcgcattcgcgagcaggtgctgcccaactccctgcta
ggtgagcgcctgcgcctctgccagcctagctccgacctgcccgagtggtgggactgcggc
cggcacgactacgacctcctcctgggcgcctccaagcacggcgtgagtcgcactgactac
cacatcctcaacgaccctgcgctgggcttcctggaggcccacaggaagttcaccaagggg
ggattggctggggtgcctcagccgccccgcgatggagctctctctactgcttcttcctct
tccactgagcaggctacagctactgctggtgctgaaaaatccttacctgtccaagaggac
gaagaagggaaggagatgaaagaggaaggtaacgacattccatgtactaaacctgagaaa
ccagacgaaggcaaggaagaagagatggaggcgaagaaggaagagaaggccgggtctccc
aagaaggcgaagaaggaagagaaggccgggtctcccaagaaggtgaaggaggaagagaag
gccgggtctcccaagaaggtgaaggaggaagaggaggaagacaaagaggaggaaatggag
gtcaacggcgacgctgacggagagacttccaaggaggccaaacccgagaaggggtacaaa
gctcccactgaggagaccaaggaccaggacaaaaagctggacttccaggagaaaccagag
tctcctaaagcatcagaagagcagggaaccaagaaagaagagagagatgagaaagaagga
agccctgccaagtctcctaaaccagtggctgagaaagggcccgatgaggagaagatggag
gaagacgacaagtctgagaagtcctctcaagctgaagcgggcgccacctcagagcagaag
aactttgacgaggagagcaacgcctcactgagcaccacggccagagacgagacccgcgac
gggttctgccccgaggacggagagccctctgccatcccggccctccaggagagaacyacc
tcatccttctggcccaaggaccgtgtcatgatcaatcgcatggacaacatctgcgatgcg
gtcatcaagggcaagtggcccgccaaccgacgccagttcttcgacttcccgggcctgttg
cctggataccccggccccatgacgtctgaaagccccatgccgaggcagagcctggccgaa
ctgtcgatggcagcggccgttcagaccagcttcagtggcagcgaggacctcaccctctcg
ccccaggctaatgacgatgctctgagcatatcattgccgaagcagcgtcgtcgcaggcgg
aggaaggtggagatagaggcagagcgtgcggccaagcgcaggaacctgatggatatggtg
gcccagctcagagagtctcacgctgcagagtcccagagccaggccatggatcttaccaag
ggtattctgcaccagcaccacaagtcttcagcgccctccccggcgagctactccagcagc
atggtctcacctgctgccctcaaggcacagatggagcttctgcagccggccacaccttcc
agacacagggccaactgctcattggccgaggctgacctgcccaccaggaggaggcggggc
cgcaggaaaaatgtggaggggctggagctgctgttcatgagaggagccacggaggattca
gagaggaccaaagcttcagtggaggggttgcagatgcccccacgttcccaccgccacaac
attcccagcacctccgcctgtgtcccctctgtcagcgctatggaggacagggaggctggt
accccctctaacaaagacctgagtgactggctcagacagcaccccacatacaccatggac
atgcctactgcgtacacaccaaagagtgaggagacgctcctctcctcccagttccccaaa
cccaagcaaaagagacaccgctgccggaaccccaacaagatcgacatcaacacgctcacc
ggagaagagaaggttcccgtgatcaaccggagaaacggaagaaagatgggtggtgccatg
gcccctcccatgaaggatcttcccagatggctcctggagaactcagattttgccgtcgct
ccagactggactgacattgtcaagcaatcgggcttcctccctgaggccatgttcgaccgt
ctcctgactgggcccttggtgcgtgaggagggtgtccgtcgtcggggaagacgtcccaaa
tcggagatcgccaaggcagcagcggcccaggctgcatcctctgggggccttaaccccctg
ctgataaacggcttgtttggaggcatggacctcaccagcttgcagggcctacagagcctc
cagagtctgcagctgcagctcatgggcttccccggcatggggggggctgacgctaaacac
gcctcggccatgctgcctctcatgctgcctggcatggctggtatgggcggtctgcccaac
atgtttggcctgggaggcctgttcgcaagcaacctggctgcagccacgcctgctgcagcc
tccaacggcaccaacgacgagggcgattcagacgagacatcgaagagagacgccagggag
ggtggacaagagcaggatgaggagaaggacgacactggggaggaggcagagtcgagcaag
gctaatggggaggtcgtggctctgaatgtggctgctgccgctatggccgcctccggcatg
tcagctacctcactggccttcaatcccttcctgctctccaccatggccccggggctcttt
tccccctacatgttcctgccccctggtctgggaggtctcaccctgcctggcttccccccc
actgccctggctgacctgcagagtgccatggctggagccatgggggttgcctctggagct
cagggccaggagaaggagcccggccaggttgccctggaccgccctgctgccgctaccgca
gacccagagactgctgatgacagtgactcagctgagagcctggagaagactgcagagtcg
tctgcgctagaagatgaggcctcagcattggcagaggaagccgactcaccggaagacctg
gaggccgaggaggaaggagaggatgcccttgaggaagagaagagtgactga
DBGET
integrated database retrieval system
