Salvelinus sp. IW2-2015 (Arctic char): 111979528
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Entry
111979528 CDS
T05762
Name
(RefSeq) excitatory amino acid transporter 5
KO
K05618
solute carrier family 1 (glutamate transporter), member 7
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
111979528
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salp02000
]
111979528
Transporters [BR:
salp02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
111979528
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GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
111979528
NCBI-ProteinID:
XP_023865891
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Position
LG19:1068507..1141088
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AA seq
446 aa
AA seq
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MSGLAALDAKCSSRLGIMTVSYYLWTTFVAVVVGILMVTIIHPGGAAQKEDNEDSGKPIM
SSADALLDLIRNMFPANLVQATFQQYRTRSIPIMKAPPPTVATSLMESTTRRVYIYGVQD
DNGTDIQNFSLDXTPPPDIQMRTLPGTSDGMNVLGIVIFSATMGIMLGRMGPNGSALVNF
CQSLNEAVLKIVAIVIWYFPFGIVFLVAGKILEMDDPSAMGKKLGFYAITVVMGLVLHGL
FILPAMYFFITKKSPIVYIRGILQALLISLATSSSSATLPITFKCLLENNHIDRRIIRFV
LPVGATINMDGTALYEAVAAIFIAQVNNYELDFGQIITISITATAASIGAAGIPQAGLVT
MVIVLTSVGLPTDDITLIIAVDWALDRFRTMVNVMGDALATGIMAHICRKDFVKEGEQVR
ETLLLNMHCTVLDTLMLRVHSPRKFS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggctagcagccttggatgccaagtgttccagccgcctgggcatcatgaccgtc
tcctactacctgtggaccacctttgtggcggtggtggtgggcatcctcatggttaccatc
atccacccagggggcgccgcccagaaggaggacaacgaggacagcggcaagccaatcatg
agctccgctgatgccctgcttgatctgattcgaaacatgttcccagccaacttggtccaa
gcaactttccaacagtaccgtaccaggagtatccccatcatgaaggcccccccacccacg
gtggcaacctccctgatggagagcaccacccggagggtctatatctacggtgtccaggac
gacaacggsaccgayatccagaacttctccctggacwtgacacctccgcctgacatccag
atgcgcacactgcccgggaccagcgatggcatgaacgtmctggggatcgtcatcttttcc
gccaccatgggtatcatgctgggaagaatggggcctaatggcagcgccttggtcaacttc
tgtcagagtctgaacgaggctgtcctgaagattgtcgccatagtgatctggtacttccct
ttcggcattgtgttcctggtcgccggtaagatcctggagatggacgacccgtcggccatg
gggaagaagttgggcttctacgctatcaccgtggtgatggggctggtgctgcacggtctc
ttcatcctaccagccatgtacttcttcatcacaaagaagagtcccatcgtctacatcagg
ggcatcctgcaggccctgctcatctccctggcaacctcgtccagctctgccacactgcct
ataaccttcaagtgcctcctggagaacaaccacatcgaccgacgcatcatccgcttcgta
ctccccgtgggcgccaccatcaacatggacgggacggcactctatgaggcagtggcggcc
atcttcatcgcccaggttaacaactacgagttggactttggccagatcatcactatcagt
atcacagccacagctgccagtattggtgcagctggaattccgcaggcaggactggtcacc
atggtgatcgtgctaacctcagtgggcctgcccactgatgacatcacactcatcattgct
gtggattgggcrttagaccgtttcaggaccatggtcaacgtgatgggagacgctttggcc
acagggatcatggctcacatctgtagaaaagattttgtcaaggagggagagcaggtgaga
gaaactctgttactcaatatgcattgcaccgtgctcgacactctcatgctccgagtgcat
tctccgaggaagttctcttga
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