Salvelinus sp. IW2-2015 (Arctic char): 111979599
Help
Entry
111979599 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent R-type calcium channel subunit alpha-1E-like
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111979599
04020 Calcium signaling pathway
111979599
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111979599
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111979599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
111979599
NCBI-ProteinID:
XP_023865961
LinkDB
All DBs
Position
LG19:14370754..14417582
Genome browser
AA seq
2072 aa
AA seq
DB search
MKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHHTCLPTADILENETMDTTEVEFACGV
RKCPENYDCIGSWIGPNNGITQFDNILFAVLTVFQCITMEGWTAVLYNTNDALGSMWNWM
YFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQVERELNGYRAWIDR
AEEVMLAEENKSSGRSALDVLKRATSKNAKHRGGPGDAEISTIGAPRMRIRTVRRGPVAY
IRRKERMLRISLRRMVKTDTFYWTVLSLVALNTICVAIVHHNQPQWLSTFLYYAEFVFLG
LFLAEMFLKMYGLGFRLYFHSSFNCFDCGVIVGSIFEVVWGFFRPGMSFGISVLRALRLL
RIFKITKYWASLRNLVVSLMSSMKSIISLLFLIFLFIVVFALLGMQLFGGRFIFEDYTPA
NFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVQYGMWSSIYFIVLTLFGNYTLLNVF
LAIAVDNLANAQELTKDEEEEEEFFNARYARGRDGPMSDDRLCVVLCRRRRRPYLRRKKA
IHRGRMAVPEEEEESDAPGGADQPPNGANAFSNRRDRRRRGGGGGGRGGRSVWEQRANQL
RKRRQMESQEVLFGGSPTEDTTDNPTTAYRAPTRSPDTSPGHLPESPMSGIMPMPEPPMS
IAIQLPEPPDSEPRPLFTLVEERAVHHRPAGGDRRHRVARKFRPGLGGXEEGGVARHRRH
RHREARAEAKSRESPHEEVRESGSRERKILEEREEKEEKEEKTDKEEVAEVEGGVSGQEE
GASIVNLESEEEHLRVCIADIPEPPLCDDFPESLPPPLLDPPPQMEEGEVGETGQCEPLS
QDPPLEPAPEQFTDPPELQAASGVNDSENNPASLNREEGEEPGQVLDSQTSVIIEMSGEQ
PLLEIIPMTALHSNKEMEVYQPERKEKEKEAQEEKEAQEEASPPKPVPPDSMFLFKASNP
IRRICHYMVTMRYFEMTILLVIVASSIALAAEDPVCTNSDRNRVLRYFDYVFTGVFTFEM
IIKMIDLGLLLHDGSYFRDLWNILDFIVVVGALFAFALTXVTILLENKGRDIKTIKSLRV
XRALRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCT
DSSMDTEKECQGYYIDYARDKKEVKKREWKRHEFHYDNVCWALLTLFTVSTGEGWPQVLQ
HSVDVTEEDRGPSRGNRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSL
EKNERACIDFTISAKPLTCYMPQNRQTFQYRLWHFVVSPSFEYTVLVMIALNTVVLMMKY
NSAPAAYDTVLKHLNTAFTVLFSLECILKIMAFGFVNYFRDTWNIFDFITVLGSITEIIV
DLQSINTFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYA
IIGMQVFGNIKLNDENHINQHNNFKTFSGALMLLFRSATGESWQEIMLSCLGGQECEPDS
SMAPMTMSPDHEGGCGTDFAYCYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPH
HLDEFVRVWGEYDRVACGRIHYTAMYEMLTHMSPPLGLGKKCPRGMAYKRLVLMNMPVDE
DMSVHFTSTLMSLIRTALEIKIARGQGMSGEDRVALDTELQKEISVIWPYLPQKTLDVLV
PINKDSDMTVGKIYASMMIMDYFKQNKAKKLRAQLEAQKASLMPFKRLDASTLSEDILYN
AHPLPCMSLSAGSALTRGGLVALSPLSQDLFAMQPMASDQDTSSQHSRTDMASGSIKRSS
STVADQRVNGLWQEEKKSPDRLYRPRHKSYKAAVSRSERKRQLDTEKERGRSKERRHLLS
PDTSRCNSEERSLQPSCSPSRERTHPLDKQGNSSDSPIPTSESSTPSRRPLSQTPTRSHP
HISYSPLVCRTHPPSGDDDDDRGSPETQRRGEASREAGGEGQTGPRGRRHHHQQGSPLRR
YPSEPYLTMQEDEHSPDPSGFMETLTFEAAVATSLGRANTVSSTSSSSFSSARRGSRSGW
QIPNGHFRKRLAQTVSVAGCEPLSDTEEDDRC
NT seq
6219 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccatggtgcccctgctccagatcggtttgctcttgttcttcgccattcttatg
ttcgccatcatcggcctggagttctacagtgggaagctccaccacacctgtctacctact
gctgacatcctggaaaatgagacgatggatacgaccgaggtggagtttgcgtgtggagtc
aggaagtgtccggagaactatgactgcatcgggtcatggatcggccccaacaacggcatc
acccagtttgacaacatcctgttcgctgtgctcactgtcttccagtgcatcaccatggag
ggatggacagctgtactctacaataccaacgatgccttgggctctatgtggaattggatg
tactttatccctctcatcatcattggctcattcttcgtactcaacctggtgttgggagtc
ctctctggggagtttgccaaagagagggagcgggtggagaacaggagagccttcatgaag
ctgagacgtcaacagcaggtggagagagaactcaatggatacagagcctggatagaccga
gcagaggaggtgatgctggctgaggagaacaagagttcagggagatctgctttagatgtg
ctgaagcgggccaccagtaaaaatgctaagcatagaggaggtcctggggatgcagagatc
tccactataggagcacctcgtatgcggatccggacagtgcggcgtggcccggtagcgtat
atacgtcgtaargagcgtatgctgcgtatctccctgcggcgcatggtgaagaccgacacc
ttctactggaccgtcctcagcctggtggctctcaacaccatctgtgtggccatcgtacat
cataaccagccccaatggctctccaccttcttgtactatgcggagtttgttttcctgggg
ctctttttggcagagatgttcttaaagatgtacggcctgggtttccggctctatttccac
tcctccttcaactgcttcgactgcggagtgatagttggcagcatctttgaggtggtgtgg
ggcttcttccggcctggcatgtcctttggcatcagcgtcctgagggcactgagactcctg
aggatctttaagatcaccaagtactgggcatctcttaggaacctggttgtgtctctaatg
agttccatgaagtccatcatcagtctgctcttcctcatcttcctcttcattgtcgtcttc
gccctgctgggcatgcagctctttgggggcaggttcatctttgaagattacactcctgcc
aactttgacacgtttccagctgccatcatgacagtgttccagattctgactggtgaggac
tggaatgaggtgatgtacaatggcatccgctcccaaggaggagtgcagtacggcatgtgg
tcctccatatacttcatagtgctcaccctgtttgggaactatacactactcaatgtcttc
ttggccatcgctgtggataaccttgccaacgcacaggaactcaccaaggacgaagaggag
gaagaggagtttttcaatgcgagatacgccagaggcagagatggcccgatgtctgatgac
aggctttgtgttgtgctctgtaggaggaggaggaggccctatctccgcaggaagaaggcc
attcacaggggccgtatggccgtccccgaagaggaggaggagagcgacgccccgggcgga
gctgaccagccccccaatggggccaacgccttctccaaccgccgtgacagacggaggagg
gggggaggaggaggaggaagaggcggaagatccgtgtgggagcagagggccaaccagtta
cgcaagcggcgccagatggagagccaggaggtgctgttcggaggcagccccaccgaggac
accactgacaaccctaccaccgcctaccgtgcacccacccgttccccagacaccagtccc
ggacacctgcccgagtcgcccatgtccgggatcatgcccatgcctgaacccccgatgtcc
atcgccatccagctgccggaacctccagactctgagcctaggcctctgtttacattggtt
gaggagagagcagtgcaccatcgacccgccggtggggacaggaggcacagggtggcccgg
aagttcagacctggccttgggggggsggaggagggaggggtggctcggcataggaggcac
cgtcatcgtgaggcccgggctgaggccaagagcagagagtccccacatgaggaggtcaga
gaatcaggcagcagagagaggaagatactagaagagagggaggagaaagaagaaaaagag
gagaagacggacaaagaagaggtcgctgaggtggagggaggagtgtcgggccaggaagaa
ggagccagcattgtcaacttagagagtgaagaagagcatctgagagtgtgtattgcagac
atccctgagcctcccctatgtgatgacttccctgagtccctacccccacccctgttggac
cctccaccccagatggaggagggcgaggtgggggaaactgggcagtgtgagcccctgtct
caggaccctccattggagccagccccagaacagttcacagaccccccagagctccaggca
gcatccggggtcaatgattcagagaacaacccagcctccctgaaccgtgaggagggtgag
gagccaggccaagtcctagacagtcagactagtgtgatcatagagatgtctggagaacag
ccactgctggagatcatccctatgacagctttacacagcaacaaagagatggaggtgtac
cagcctgaaaggaaggagaaggagaaggaggcgcaggaggagaaggaggcgcaggaggag
gccagcccgcccaaacctgtacctcctgacagcatgttcctcttcaaggcctccaatccg
atcagaaggatctgtcactatatggtgaccatgcgctactttgagatgaccatcttgctg
gtgatcgtggctagcagcatcgctctggctgctgaagaccctgtgtgcaccaactctgac
agaaacagggttctccgttactttgattacgtctttactggagtcttcacttttgaaatg
atcataaagatgattgacctgggcctgcttctgcacgacggctcctacttccgtgacctg
tggaacattctggacttcatcgtggtggtgggagctctgttcgccttcgctctgacgtga
gtcacaatacttctggaaaacaaaggcagagacatcaagaccatcaagtccctcagggtc
nctagagccctacgacctctgaagaccatcaagagactccccaaactcaaggcagtgttt
gactgtgtggtgacgtccctgaagaacgtcttcaacatcctcatcgtctacaagctcttc
atgttcatcttcgctgtcatcgccgtgcagctcttcaagggaaagttcttctattgcaca
gacagctccatggacacagagaaggagtgccaaggttactacatagactacgctcgagac
aagaaggaagtgaagaagagggagtggaagagacatgagttccactatgacaatgtctgc
tgggctctgctcaccctcttcactgtktccactggagagggctggccgcaggtcctgcag
cattctgtggatgtgacagaggaggacagaggtccaagtcggggcaacaggatggagatg
tccatcttctacgtcgtctacttcgtggtcttccctttcttctttgtcaatattttcgtt
gctctcatcatcatcaccttccaggagcagggggataagatgatggaggagtgcagctta
gagaaaaatgagagggcatgcattgactttaccatcagtgccaagcccctgacctgctac
atgcctcagaacagacagactttccagtacaggctgtggcactttgtggtgtcaccgtca
tttgagtacacagtgctggtcatgattgccctcaacactgtggtgctcatgatgaagtac
aactccgctccagcagcgtatgatacagtattgaagcacctgaacacagccttcaccgtt
ctcttctccctggagtgtatcctcaagatcatggcctttggttttgtgaactattttcga
gacacttggaacatttttgatttcatcaccgtgctcggcagcatcactgagatcattgtg
gacttacagtcaataaacacgttcaatatgagtttcctgaagctgttccgggctgccagg
ctgatcaagctgttgaggcagggctacaccatacgaatcctgctctggaccttcgtacaa
tcctttaaggcccttccttatgtgtgtctgctcatcgcaatgctgttcttcatctatgcc
atcattgggatgcaggtgtttggaaacatcaaactgaacgacgaaaaccacataaaccag
cacaacaacttcaagaccttctccggtgcgctgatgcttctcttcaggagtgcgaccggg
gagtcatggcaggagatcatgctatcgtgtctgggggggcaggagtgtgagccagactcc
tcaatggcacccatgaccatgtcccctgaccacgagggtggctgtggtactgacttcgcc
tactgctactttgtctccttcatcttcttcagctccttcctgatgctgaatctgtttgtg
gctgtgatcatggataactttgagtatctgaccagagactcttccatcctgggacctcat
cacctggatgagtttgtccgtgtctggggagagtacgaccgcgtagcatgtgggcgtata
cactacactgccatgtatgagatgttgacccacatgtctccaccccttggtctggggaag
aaatgccccagaggtatggcctacaagaggctggtgttgatgaacatgccagtggatgag
gacatgtcagtccacttcacctccaccttgatgtctctcatccgcaccgctctggagatc
aagatcgcacgaggtcagggaatgagtggggaggaccgagtagctctggacactgagcta
cagaaggagatcagtgtgatatggccgtacctcccccagaagaccctggatgtactggtg
cccatcaacaaagattccgacatgacagtaggtaagatatatgcctccatgatgatcatg
gactacttcaaacagaacaaagccaagaagctgagagcacagctggaagcacagaaggcc
agcctgatgccgttcaagaggctggatgcctcgactctctctgaagacattctgtacaat
gcccatcccctgccctgcatgtccctcagtgccggctccgccctgaccagaggaggcctg
gtggcattgagtcctctctcccaggacctgttcgccatgcagcccatggcctctgaccag
gacaccagcagtcaacactccaggacggacatggccagtggctccattaagcggtcctcg
tctactgtggctgaccagagggttaatggactgtggcaggaggagaagaagagtcccgat
agactgtacagaccacgccacaagagctacaaggctgccgtctcccggtcagaaagaaag
aggcagttggacacggagaaggagcgcgggaggtccaaagagcgccgccacctcctctcc
ccagacacatcccgctgtaactctgaggagaggagtctgcagccctcatgctcccctagc
cgagagcgcacacaccccctggacaaacagggtaacagctccgacagccccatccccacc
tctgaatctagtacccctagtcgccgccccctgtcccagactccaactcgctcccatcca
cacatctcctactcccctctggtgtgtcgcacacaccctccctccggggacgatgatgac
gacaggggcagcccagagacccagaggcggggggaggcctccagagaggcagggggagag
ggacagaccgggccaaggggtcgtcgccaccaccaccagcagggctcccctctgcgtcgc
tacccgtcggagccctatctcaccatgcaggaggacgagcacagtccggacccctccggg
ttcatggagacactgactttcgaagcggcggtggccactagcctgggacgcgctaacaca
gtcagctccacctccagctctagcttcagctcagcccgacggggctccaggagcggctgg
cagatccccaatggacacttccggaaacgcctggctcagaccgtctctgttgcaggctgt
gagccactcagcgacacagaggaggacgaccgctgctag
DBGET
integrated database retrieval system
