Salvelinus sp. IW2-2015 (Arctic char): 111979608
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Entry
111979608 CDS
T05762
Name
(RefSeq) intraflagellar transport protein 56 isoform X1
KO
K19685
intraflagellar transport protein 56
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111979608
Cilium and associated proteins [BR:
salp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
111979608
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
ANAPC3
TPR_16
TPR_2
TPR_14
TPR_6
TPR_9
SRP_TPR_like
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
111979608
NCBI-ProteinID:
XP_023866008
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Position
LG1:2046647..2054166
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AA seq
640 aa
AA seq
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MCKYCLIPALVNQLPAVMSTIRILFLVTSIQILSRVKPAVGGDSAASVSEKKKKNKAKKS
PRLEEYLNQRDYLGAQTLLEFQRDVGEKEEHADLWIGYCAFHLGDYKRAMEEYRALTLRL
EEPGEVWVYLACTQFFLGLYREAEEAANKAPKCALQNRLLFHLAHKFNDEKKLMGFHQNL
EDVTEDQLSLASIHYMRSHYQEAIDIYKRILLQNRDFLALNVYVALCYYKLDYYDVSQEV
LAVYLQSIPESTIALNLKACNHFRLYNGKAAEAELKNLIDISSCSFEFAKELIRHNLVVF
RGGEGALQVLPPLIDVISEARLNLVIYYLRQDDVQEAYTLIKDLEPTTPQEYILKGVVNA
ALGQEIGSRDHLKIAQQFFQLVGGSASECDTIPGRQCMASCFFLLRQFEDVLIYLNSVKS
YFYTEDTFNFNYAQAKAALGNYKEAEEIFLLIQGEKMKTDYVYLSWLTRCFIMNQKGRLA
WELYLKMGASPDSFSLLQLIANDCYQMGQFYWAAKAFETLEKLDPDSNYWEGKRGACVGI
FQLILAGREPKDVLAHHFCALSNLHCTGHPEGGAAPIEEHTEPPGGVHYQSSEEMGQRQQ
GSSDIIMSYITCLTHIIHLLHVVITLYMWFTCAFFIRLFY
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaaatattgtttgattcccgctttagtaaaccaattgccagctgtcatgtccaca
ataaggattctcttccttgtcacatccatccagatcctgtcccgggtgaagccagcagta
ggtggagattctgcagctagcgtcagtgagaagaagaagaaaaacaaagccaagaagagc
cctcgcctggaggaatacctcaaccagagagactaccttggggcacaaactctgttagag
tttcagcgagatgttggagaaaaagaggagcatgcagacctttggattggctactgtgcc
tttcacttgggtgattacaagagagcaatggaggagtacagggccttgacactccggtta
gaagaaccaggggaggtgtgggtgtatctggcctgcactcagtttttcctggggctctac
agagaggcagaggaggctgcaaacaaggctccaaagtgtgcacttcagaatcgcctgctc
ttccacctggctcataagttcaacgatgagaagaagctgatgggtttccaccagaacctg
gaggatgtgactgaggaccagctgagcctggcctccatccactacatgagatcacactac
caggaggccatcgacatctacaaacgcatcctgctacagaatagagatttcctggctctt
aacgtgtacgtagcgctgtgctactacaagttggactactatgatgtttcccaagaggtg
ttggctgtgtatctgcagagtattcctgaatccaccatcgctctcaacctcaaggcctgc
aaccacttcaggctgtacaacggcaaggcagctgaggctgagttaaagaacctcatagac
atctcctcctgctcctttgagtttgctaaggagcttatccggcataacctggtggtgttt
cgtggtggggagggggcgttgcaggtgctgcccccgttgattgatgtcatctctgaggct
cggttgaacctggtcatctactacctcagacaagatgatgttcaagaggcttacaccctc
ataaaagacttggagccaaccacaccacaggagtacattttgaaaggagtggtgaatgcc
gctttgggtcaagaaattggatcgagggatcacctgaagattgctcaacagttcttccag
ctggtcggaggctcagccagcgaatgcgacacgatacctggaagacagtgtatggcttcc
tgtttcttccttctgaggcagtttgaagacgttctcatctacctcaactcagtcaagagt
tacttctataccgaggatacgttcaatttcaactatgcccaggccaaagctgccttgggc
aactacaaagaagcagaggagatatttctgctgatccagggtgagaagatgaagactgac
tatgtatacctgagctggctgactcgctgcttcatcatgaaccagaaaggccggctagcc
tgggagctgtatctgaagatgggggcttcgccagactccttcagcctcctacaactcatt
gccaatgactgctatcagatgggtcagttctactgggcagccaaagcgttcgaaactctg
gagaaactggatcccgactccaactactgggagggcaagagaggggcttgtgtcggaatc
ttccagctcatactggcaggcagagagccaaaagatgttttggcacatcatttttgtgcc
ttgagtaatttacattgcacgggacaccctgaaggaggtgctgcccctattgaggagcac
acagaacccccaggtggagtacattatcagagctctgaggaaatgggccaaagacaacag
ggttcctctgacataataatgtcatacataacgtgcttaactcacataatacacttacta
catgttgttattacattatatatgtggtttacatgtgcattttttatcagactcttttac
tag
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