Salvelinus sp. IW2-2015 (Arctic char): 111979675
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Entry
111979675 CDS
T05762
Name
(RefSeq) tiggy-winkle hedgehog protein-like
KO
K11988
sonic hedgehog
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
111979675
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111979675
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
salp00536
]
111979675
Peptidases and inhibitors [BR:
salp01002
]
Cysteine peptidases
Family C46: hedgehog family
111979675
Glycosaminoglycan binding proteins [BR:
salp00536
]
Heparan sulfate / Heparin
Morphogens
111979675
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Intein_splicing
VldE
Hom_end_hint
Ribosomal_S6e
Vint
Motif
Other DBs
NCBI-GeneID:
111979675
NCBI-ProteinID:
XP_023866068
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All DBs
Position
LG19:19905476..19908537
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AA seq
415 aa
AA seq
DB search
MDMMLMSIRLALVGFICLSLVSAGFACGPGRGYGKRRHPKKLKPLAYKQFIPNVAEKTLG
ASGKYEGKITRNSERFKDLTPNYNPDIIFKDEENTNADRLMTQRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKNKYGMLSRLAVEAGFDWVNYES
KAHIHCSVKAENSVAAKAGGCFPGSASVLLEDGRSKLVKELELGDKVLAADKEGHIVSSD
FLMFMDRDPVTSREFYVFETEKPNRKLRLTPAHLVFVTNNVTDGDMTAVFASNVKLGQQV
FVVDEALDHLKAVTVERIYVEEYEGSYAPVTSQGTIIVDHVLASCYAVIEDHKWAHWAFA
PVRLGHALMSLTGLVKEREGIPQRDGIDWYSDILYHIGTLLLDRNSFHPLGMSQS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacatgatgctgatgtcgataagacttgcgcttgtgggcttcatctgcctgtcttta
gtatccgctggcttcgcctgtggtccaggtaggggatatggaaaacgaagacatccgaaa
aaactgaagcctttggcttacaagcagttcattcccaacgtggcagagaagacccttggg
gccagtggcaaatacgaagggaagatcacaaggaactctgaaagatttaaagacctgaca
ccaaactacaatcctgacattattttcaaagatgaggaaaacactaatgctgacagactt
atgacacagagatgtaaggacaaactgaactctttggctatttcagtcatgaatcagtgg
ccgggagtgaagctgcgcgtgacagaaggctgggacgaggatggacaccatttcgaggaa
tctttacactatgaaggaagggctgtggatatcaccacctctgacagagataaaaacaag
tatggaatgttatccaggctcgcagtggaggcgggattcgactgggtcaattatgaatcc
aaagcccatattcattgttctgtgaaagcagaaaattcagttgctgccaaagcgggtggc
tgcttcccagggtccgcctcagttcttctcgaggatggtcggagcaagctggtaaaggaa
ctggagttgggcgacaaagtgttagctgcagacaaagaaggacatattgtatctagcgat
ttccttatgttcatggaccgagatccagtaacgagtcgagaattttatgtttttgaaacg
gagaagcccaacagaaagttaagactgacgccggcacaccttgtcttcgtcaccaataac
gttacggatggcgatatgactgcagtgtttgccagtaatgtaaaacttgggcaacaggtg
tttgtcgtggacgaggcactagaccacctaaaggcagtcactgtagaaaggatttacgtg
gaagaatacgagggatcttatgccccagtgacttcacaaggaaccatcatagttgaccat
gttttggcgagctgttacgcggtaatcgaggaccacaaatgggcgcactgggcctttgca
ccagtccggttgggtcacgcgttgatgtctttgacaggtctagtcaaagagcgcgaggga
atccctcagagagatggaatagactggtactcagacattctataccacatagggacattg
ctgctggacagaaactcctttcatcctcttggaatgtcacaaagttga
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