KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111979751
Entry
111979751         CDS       T05762                                 
Name
(RefSeq) tenascin-R-like
  KO
K06252  tenascin
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510  Focal adhesion
salp04512  ECM-receptor interaction
salp04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:salp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    111979751
   04518 Integrin signaling
    111979751
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    111979751
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:salp00536]
    111979751
Glycosaminoglycan binding proteins [BR:salp00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   111979751
SSDB
Motif
Pfam: fn3 EGF_TEN EGF_Teneurin FN3_DSCAM-DSCAML_C Fn3_Dep-1_3rd Fn3_PBP1 Pur_ac_phosph_N EGF_Tenascin Fn3_VIN3 Fn3_Dep-1_2nd EGF_2 Interfer-bind FN3_Tor_3rd Fn3_Dep-1_1st DUF4998 Fn3_ELFN DUF7949 SPE9_EGF_3rd
Other DBs
NCBI-GeneID: 111979751
NCBI-ProteinID: XP_023866210
LinkDB
Position
LG19:complement(22213654..22392596)
AA seq 1116 aa
MGPARGWLLGLVLLLLGTQAALSPSGEEGKLVRTIRVRRQAPSDGPTSQSNNQTIKEQPM
VFNHVYNINVPLESLCSVDLDSAVPPPSQATRGAVSSGGGEGATEFTEQTVDADSQVTFT
HRINIPKQACACPTANIVQQLAIRIEMLEREVLLLRAQCSSGNCGCGESSSMGHLDFIPQ
CSGHGSFKMDLCGCVCEDSWTGKNCSEPRCPDDCSGQGVCMEGECVCDSDFGGDNCSEPR
CPADCSGRGLCMDGECICEENFTGEDCTLGRCLNDCSDQGLCTNGTCQCRPGYVGEDCSL
AYCANNCSQKGICKEGFCVCQDGFAGEDCSAVAPALNLRMRGVTEHTIDLEWEGSVLMTD
YLVTYVATSPGGVQLEIRIPGNTTSCSIPDLEPGIEYNINVYAVLNNVISAPTNTQVSTY
LSNPDGLLFKSITETSVEVQWQPFYYSFDGWEISFIPKDNDGGMTAQLPSTITSFHQTGL
RPGEEYTVNLVALRDQGRSQPVSATVTTLIDGPTQLIVRDVSDSVAFVEWTNPKAKMDQI
VLRYGLVGGDRPKTTFRLQPTLSQYSLQMLRPGSRYEVSISGVRKGNESGTISTEFSTVL
VFLSEIDAPKNLRVLSKFSTTLELEWDNSEAEVEGYQVVYSTLAGDQYEKVIVPLNDGPT
SKTTLTNLLPGTEYGIGISAMLGTNQSSPATMNARTGLDVPMDLTVTASTDNTITLLWGV
VQGPIDHYMVTYTSSSGLTTEVTVPKDVTTTTLNDLEPGTEYTITVAAQRGRQQSTAATI
DGFTGSRPIIALYLSDVTWDSVTVAWSAPAPPADLYILTYSSEDGTDTSKVTLDGSKTRS
SIKGLLPSTEYTISLITIHGEVKSEAVTATLTTGMDPPKEMTVSYATEDSVIISWLRPFA
PFDYYKMSYQSARGTVDSVVIDNDVTNYTLSSLHPATEYEINLNVVRGSQESKSITTSVF
TAMDMPMELTALNITPQGALLRWNPPLSSVDNYVFTLTCNQVTANTFLVEGVKQEHQLSK
LKPSTTYSVALYATKGPLTSGTVIANFETPMDAPLNLTASEVNHRSALISWQPPIADIDN
YMLTYKSVDGNRKELILDAEDTWIRLEGLQRPQNTL
NT seq 3351 nt   +upstreamnt  +downstreamnt
atgggccctgcacgaggctggctgctgggcctggttctactccttctggggacccaggct
gctctatccccatccggtgaggaggggaagctggtccggaccatcagggtcagacgacag
gcaccttcagatggccccaccagccaatctaacaaccagaccatcaaggagcagccaatg
gtcttcaaccatgtgtacaacatcaacgtgcccctagagtctctgtgctcggtggatctg
gattcagcagtgcctccacctagccaggccactagaggggctgtgtccagtgggggtggg
gagggcgccacggagttcacagagcagacagtggacgcagacagccaggtcaccttcacc
caccgcatcaacatccccaaacaggcctgcgcctgtcctacagccaacatcgtgcagcag
ctggccatccgcatcgagatgttggagagagaggtgttgctgctgagagcccagtgcagc
tctggcaactgtggctgtggggagagttcatccatgggtcacctggacttcattccccag
tgcagtggccatggcagcttcaaaatggacctgtgtggctgtgtgtgtgaggacagctgg
acgggcaagaactgctctgagccgcgctgcccagacgactgctccggacagggagtgtgt
atggagggtgagtgtgtgtgtgacagtgacttcggaggggacaactgctcggagccccgc
tgcccggcggactgctccggtcgagggctgtgcatggatggggagtgtatctgtgaggag
aacttcactggagaggactgtacactgggacgctgcctcaatgactgctctgaccagggg
ctgtgcaccaacggaacctgccagtgtcgcccgggatacgtaggagaagactgctccttg
gcctactgcgccaacaactgcagtcagaagggcatttgtaaagaaggcttctgtgtctgc
caagatggcttcgctggagaagactgctctgcagtggctccggctctgaacttgcgcatg
cggggagtgacggagcataccattgacctggagtgggaggggtcagtgttgatgacggac
tacctggtcacctacgtggccaccagcccaggtggggtccagctggagatcaggatccct
gggaacaccacctcctgcagtatcccagacctggagcctggcatcgagtacaacatcaac
gtctacgctgtgctcaacaacgtcatcagtgcccctaccaacactcaggtgtcaacctat
ctctcaaatccagacggtttactcttcaaatccatcacggagacatccgtggaggtgcag
tggcaacctttctactactcatttgatggctgggaaataagcttcattcccaaggacaat
gatggagggatgacagcccagctacccagcaccatcacttcgttccaccagacaggcctg
aggccaggggaggagtataccgtcaacctggtagctctgagggaccaaggccgcagccag
cctgtatctgccaccgtcaccacattgattgatgggccgacacagctgatagtgcgtgat
gtctcggactcggtggccttcgtggagtggaccaatcccaaggccaagatggaccagata
gtgctgcgttatggcctggtaggaggggacaggcccaagactactttccgtctgcagccc
accctcagccagtactccctgcagatgctgaggccaggctcgcgctatgaggtgtccatc
agtggtgttcgcaagggcaatgagagtggaacaatctccacagaattcagcaccgttctg
gtgttcctctcagagatcgacgcccccaagaacttgcgagtgctgtccaagttctccacc
accctggagctggagtgggacaacagcgaggcggaggtagaggggtaccaggtggtctac
agcaccctagcaggggaccaatacgagaaggtcattgtcccactcaacgatggacccacc
agcaagaccacactcacaaacttgttgccaggtacagagtatggcattggcatatcggct
atgcttggcaccaaccagagttctcctgccacaatgaacgccagaactggtctggatgtc
cccatggacctgactgtgacggcgtccacagacaacaccatcaccctgctgtggggggtg
gtccaggggcctatcgaccactacatggttacctacacctcctcatctggcctgaccacg
gaggtgaccgtccccaaggacgtgaccaccaccacgctcaatgacctggagccaggcaca
gaatacaccatcactgtagctgcccagaggggaaggcagcaaagcactgcagccaccatt
gatggcttcacaggctcccgccccatcatagcactctacttgtctgatgtcacatgggac
tcggtgacggtggcatggagcgcccctgccccacccgcagacctctacatcctcacctat
agctctgaggacggcactgacacgtccaaggttaccctggatggatccaagacccggtcc
tctatcaagggactcctgccctccacagagtacaccatcagccttatcaccatacatgga
gaggtgaagtctgaggctgtcacagccacgctcaccacaggaatggatccacctaaagag
atgactgtgtcatatgccactgaagactccgtcatcatatcatggttgagaccattcgct
cccttcgactactacaagatgtcctatcaatcagcaagagggacagtggacagcgtggta
attgacaatgacgtcactaactacaccctgtccagcctccacccagcaacagagtatgag
atcaacctgaacgttgtgcggggcagccaggagagcaagtccatcaccaccagtgtcttc
acagcgatggacatgccaatggaactaacagccctcaacattaccccacaaggagcttta
ctccggtggaaccctcctctgtccagcgttgacaactacgtgttcaccctcacctgcaac
caggtgacagctaataccttcctggtggaaggtgtgaaacaggagcaccagcttagtaaa
ctcaagcccagcaccacttactctgtagccctctacgccaccaagggacccttgaccagt
ggaaccgtcatcgccaactttgaaacacccatggacgctcctctgaacctgacggctagc
gaggtgaaccaccgcagtgccctcatctcctggcaaccgcccatcgcagacatcgacaac
tacatgctcacatacaagtcagtggatggcaacagaaaggagctgatcctggatgccgag
gacacttggatccgtctggaggggctgcagagaccacagaatacactgtga

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