Salvelinus sp. IW2-2015 (Arctic char): 111979775
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Entry
111979775 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase mib1 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111979775
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111979775
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111979775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
SH3_15
MIB_HERC2
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
zf-C3HC4_2
Sina_RING
Prok-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
111979775
NCBI-ProteinID:
XP_023866240
LinkDB
All DBs
Position
LG19:complement(11660077..11756491)
Genome browser
AA seq
1044 aa
AA seq
DB search
MTTGRNNRVMMEGVGARVIRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDVRIFDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIYTGGRVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSAASPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGEGVAAGAEGGSSQFLVGDLVQICYDIDRIKLLQRGHGEWA
EAMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKVAPAGSAVTNASGERLSQLL
KKLFETQESGDINEELVKAAANGDLAKVEDILKRPDVDVNGQCAGHTAMQAASQNGHVDV
LKLLLKHNVDLEAEDKDGDRAVHHASFGDEGSVIEVLQRGGADLNARNKRRQTPLHIAVN
KGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNA
LHHAALRGNPSAMRVLLAKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGSASL
DIQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLSQLRQLQ
DMQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTIRNKKGQSPLDLC
PDPSLCKALAKCHKEKTSGQVGSRSPSLNSNGETLEECMVCSDMKRDTLFGPCGHIATCS
LCSPRVKKCLICKDQVQSRTKIEECVVCSDKKAAVLFEPCGHMCACENCAGLMKKCVQCR
AVVERRTPFVLCCGGKGMEGDAADDDDDDDDDDDEDLTGSSNSALMAGGSQQDLLQPNNL
ALSWSSGNIPAMQRDKDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFMCGHGTC
QLCGDRMSECPICRKAIERRILLY
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgactactggcaggaataaccgtgtgatgatggaaggagttggtgcgagagtgatccgt
ggacccgattggaaatggggaaaacaggatggyggagagggacatgtcggcaccgtcagg
agtttcgaaagtccggaagaagtggttgttgtctgggataacgggactgcggccaactac
cggtgctctggtgcatacgacgtgaggatatttgacagtgctcccacaggtatcaagcat
gacggtaccatgtgtgacacctgccgtcagcagcctatcatcggtatccgctggaagtgt
gcggagtgcaccaactatgacctctgtaccacctgttaccacggagacaagcaccacctg
cgacaccgcttctacaggatcaccacccctggcagcgagagagtcctgttggagtctcgc
cgcaagtcgaagaagatcacagcccgaggcatctacacaggtggccgggtggtgagggga
gtagactggcagtgggaggatcaggacggaggcaacggcaggagaggaaaggtgacagag
atccaggactggagtgcagccagcccccacagtgcagcctacgtactttgggacaacggg
gccaagaacctctacagagtgggcttcgaggggatgtcggatttgaaatgtgtccaggat
gccaaaggaggctctttctacagagaccactgccctgttctaggcgaacagaatggcaac
aggaacccaggtggtctgcagattggagacctggtcaacatcgacctggacctggagata
gtccagtccctgcagcacggccacggaggctggacagacggcatgttcgagaccctcacc
accaccggtaccgtgtgtggaattgacgaggaccacgacattgtggtgcagtaccccagc
gggaacaggtggacgttcaaccctgcggtgytgaccaaagccaacgtggtgcgtagtggg
gaaggtgttgcggcgggggcagagggcggcagctcccagttcctggtgggagacctggtc
cagatctgctacgacatcgaccgcattaaactgctgcagagaggacacggggagtgggct
gaggcaatgctgcctaccctgggcaaggtgggccgcgtgcagcagatctactcagacagc
gacctgaaggtggaggtgtgcggaacgtcatggacctacaaycctgctgccgtcaccaaa
gtggcccccgctggctccgctgtcaccaatgcatccggggagcgtctgtctcagctgctg
aagaagctgtttgagacccaagagtctggtgacatcaacgaggagctggtcaaagcagca
gccaatggcgatctggccaaggtggaggacatcctcaagagacctgacgtggacgtgaac
gggcagtgtgctggacacacagccatgcaggcggccagtcagaacggacacgtggacgtc
ctcaagctgctgctgaaacacaacgtggacctggaggccgaggacaaggatggagaccgg
gcggtgcaccacgcgtccttcggggacgagggctctgtgatcgaggtgctgcagagaggc
ggggccgacctgaacgccaggaacaagcgcagacagacccccctgcacatcgctgtcaac
aagggccatctgcaggtggtcaagaccctgctggactttggctgccaccccagcctccag
gactcagagggagacacccccctacatgatgccattagtaagaagagggatgacatgctg
tctgtgctgctggaggcgggtgcagatgtcaccatcaccaacaacaacggtttcaacgcc
ctgcaccacgctgccctccgagggaaccccagtgccatgcgtgtgttgctggccaagctg
ccgcggccctggatcgtagatgagaagaaagatgacggttacaccgccctgcacctggcg
gcgctcaacaaccacgtagaggtggccgagctgcttgttcaccagggcagtgccagcctg
gacatccagaatgtaaaccaacagacggccctacacctggctgtggagagacagcacaca
cagatagtcaggctactggtgcgagcggaagccaagctggacgtgcaggacaaggatggg
gacactcctctccacgaggcgctgcgtcaccacacgctgtcccagctccgccagctgcag
gacatgcaggacgtcagcaaggtggagccctgggaaccgtccaaaaacacgctgatcatg
ggcctgggcacccagggagcagagaagaagagtgcagcatccatcgcctgcttcctggcg
gctaacggagcagacctgaccatccgcaacaagaagggccagtcccctctggacctctgc
cccgaccctagcctctgtaaggccctggccaagtgccacaaggagaagaccagtggccag
gtgggctctcgcagcccgtctctgaacagtaacggtgagaccctggaggagtgtatggtg
tgttctgacatgaagagagacaccctgttcggaccgtgcggacacatcgccacctgctct
ctctgctccccccgcgtcaagaagtgtctcatctgcaaggaccaggtccagtccagaacc
aagatcgaggagtgtgtcgtatgttctgacaagaaggctgccgtgctcttcgagccctgc
ggtcacatgtgcgcttgtgaaaactgtgccggcctcatgaaaaagtgcgtacagtgccgg
gctgttgtggaacgccgcacgccctttgtcctttgttgtggagggaaaggtatggagggt
gatgccgctgatgatgatgatgatgatgatgatgatgatgatgaggaccttacaggtagc
tctaactcagctctaatggcaggggggtcgcagcaggatctgctccagcccaacaatctg
gcgctaagttggtccagcggtaatatcccggccatgcagagagacaaagacaacaccaat
gtcaacgctgacgttcagaagctgcagcaacaactgcaggacatcaaggagcagaccatg
tgtccggtgtgcctggaccggctgaagaacatgatcttcatgtgtggccacggcacctgc
cagctgtgtggcgaccgcatgagcgagtgccccatctgccgcaaggccatcgagagacgc
atcctcctctactag
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