Salvelinus sp. IW2-2015 (Arctic char): 111979804
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Entry
111979804 CDS
T05762
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04145
Phagosome
salp04814
Motor proteins
salp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111979804
09142 Cell motility
04814 Motor proteins
111979804
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111979804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111979804
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111979804
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
111979804
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
111979804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
Beta-prop_EML
WDR55
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_DCAF4
Nbas_N
Motif
Other DBs
NCBI-GeneID:
111979804
NCBI-ProteinID:
XP_023866283
LinkDB
All DBs
Position
LG19:7869276..7884368
Genome browser
AA seq
641 aa
AA seq
DB search
MLEFYYYTCMADKQDKSELKAELERKKQRLAQIREEKKRKEEEKNKKKDGSDSKREGGGV
GAADDSSDLEKKRREAEALLQSMGIAPDIPNTKSVGSDSGSQDSGDGNSRTLPWDPDTST
LQLHSDSELLGRGFRLGMAKVTQVDFPPKEMVSYSKETQTPADTQTHTQAKPAEEAEEEE
EEEMVDPKPAEDSQEEKADEQKQEEVPPKELTEEEKMHLLNSEEFMTFFDRGSRIVERAL
SERVDVCFDYSGRDLEDKEGEMQAGAKMSLSRVFSDERWSKNRVVTCLDWSPQYPELLVA
SYNNNEDAPHEPDGVALVWNMKYKKTTPEYTFHCQSAVMSAAFARFHPNLIVGGTYSGQI
VLWDNRSNKRTSVQRTPLSASAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWNLDMLSQ
PQDSLELVFKQSKAVAVTSMAFPLGDVNNFVVGSEDGSVYTACRHGSKAGISDVFEGHHG
PVTGLSCHSAVGPVDFSHLFISASFDWTVKLWTTKSTRPLYLFEDSCDYVYDVMWSPTHP
ALFACVDGSGRLDLWNLNNDTEVPSASVVVDGSPALNRVRWAHSGREIATGDSDGQVLVY
DVGEQICVPKADEWTRFVRTLVEINESRDEGDELAAQRLLA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaattctactactacacatgcatggcggataaacaggataagagtgagctgaaa
gcagagctggagaggaagaaacagcgcctggcccagatccgagaggaaaagaagagaaaa
gaggaggagaagaacaagaagaaggatgggtctgactcgaagcgggaagggggtggagtc
ggtgcagcagatgactcttctgacctggagaagaagaggagagaggctgaggctctgctg
caaagcatggggatcgcccctgatatacccaacaccaagtcagtgggcagcgattctgga
agccaggactctggagatggaaactctaggacgttaccctgggatcctgacacctctact
ctgcagctgcactctgactctgaactactggggcgaggttttaggcttggcatggcaaag
gtgacccaggtggatttccctccaaaagagatggtgtcctactccaaggagacacagacc
cccgccgatacacaaacacacacccaggctaaaccagcagaggaggcggaggaggaagaa
gaggaggagatggtcgatcccaagccagcagaggactcccaggaagagaaagctgatgag
cagaagcaggaagaagtccctcccaaggagctgactgaagaggagaagatgcacctgctc
aactctgaggagttcatgaccttcttcgatcgagggagcaggattgtagagcgggctctc
tctgagcgagtggacgtctgcttcgactacagtggccgagacctggaggacaaggagggt
gagatgcaggcgggggctaagatgtctctgagtagggtgttctctgacgaacgttggtcc
aagaacagagtggtcacctgtctggactggtctcctcagtaccctgagctgctggtggcc
tcctacaacaacaatgaagatgctcctcatgagccggacggagtggctctggtctggaat
atgaagtataagaagaccacacccgaatacaccttccactgccagtctgcggtgatgtca
gcggcattcgccaggttccatcctaacctgattgtgggtgggacttactcaggccagatc
gtcctatgggacaacaggagcaacaaaagaacatctgtacagagaactcccctgtctgca
tccgctcacacgcatcctgtgtactgtgtgaacgtggtcgggacccaaaacgctcacaac
ctcatcagcatctctactgacggaaagatgtgttcttggaacctagacatgctgtctcaa
ccacaggacagtctggagctggtgtttaagcagtcgaaggcagtagcagtgacctccatg
gcttttcctctgggtgacgtcaacaactttgtggttgggagtgaagatggatccgtctac
accgcctgccgccacgggagtaaggcaggcatcagtgatgtgtttgagggacaccatggt
ccagtcactggactgagctgtcacagtgccgtgggtcccgtggatttctcccatctcttc
atctctgcttccttcgactggaccgttaagctgtggaccaccaagagtacccgtcctctg
tatttgtttgaggacagctgtgactatgtgtatgatgtcatgtggtctcccactcacccc
gccctcttcgcctgtgtggatggatcaggacggctggacctgtggaacctcaacaacgac
acagaggtgcccagtgccagtgtggttgtggatgggtctcctgctctgaaccgtgtgcgg
tgggctcactcagggagagaaatcgctacaggagactcagacgggcaggtgctggtctac
gacgtaggagagcaaatctgtgtgcccaaggcagatgagtggacccgtttcgtgcgcacg
ctcgtggagatcaacgagagccgagacgaaggagacgagctcgccgcgcaacgcctactc
gcctga
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