Salvelinus sp. IW2-2015 (Arctic char): 111979921
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Entry
111979921 CDS
T05762
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111979921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111979921
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
111979921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
111979921
NCBI-ProteinID:
XP_023866376
LinkDB
All DBs
Position
LG20:complement(57425592..57492893)
Genome browser
AA seq
2681 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLAHSLNQVSTEHIELKDNLGSDDPEGDVPVLLQTVLSRNPNIFREKNIMQQPMMPQ
YKMSQNSMHGSPASTNYQQTTISHSPSSRFAPPQMGSDARFTPQQNSPVPSPYAPQSPAT
YMQQYPHPPSYSQHQQIQQGSPQRPVQPCLEVQTQPQASPHQNPSTPTLVASPMVPGGMR
NIHDNKVSGQISSNSANHNARHGSNEDYMNIVHRLGNEESDPSMRNASFPLRSPQSVCSP
ASSEGTPKAGLRPSLILHSPHPYASPRDSAPDLLLDSPDCKKKQKKLTKEEKEQLDKAAM
YDIVSSPSKDSTKLTLKLSRVKSTEMDQSGELLPGAEDQDTDLAYNSLQFSRTQQDPAHR
LGPGQGEQSGYQQVPVLQNTKQAGGVISGAVYDDAEMDALAEIERIERETLIERERCSKE
VQDKDKPLKKRKQDSYPQEPGAGGTAGATQPGVGGGNAGSKLAPQEASAASNGASRPALM
VSIDLQQAGRADGQPEVNIGTHTPALRSWPEERLCPGDGPDSTGVLRLNSKTEGDTLQTA
DVRPEVIKQRADTPKKLGPDVRPETPKHKHENRRDSSKHRHDGKPDNSKARPDARMPDKP
RQRHEGRSDSGHREDRSRDSDPSRIRRPETPSKSSRGEHDSKHGRDRDRERGDKDRERKH
RTEAGDPRDRRSPEQRSRPESPRVKQEGRGGVDHSGRQRTDRPGPNLKSPNKEERRSGEE
RRSGDGSRNRQDSKQQPAENKQEFPAYLLGGVKSGGFKNFVIPKVKRDKDGHVLAAEIRK
PGLGSVVEGWKEPRVKLERLGLVEKMKTAAKPVVVLQKLSIDEVQKIIRERKDRSARSSK
SSKSRPSHWISEKESTMPLCERVKMNKRKRSTIKEKPKYAEVNSDDDDDDDDSVTESTRK
RHKKEREKTWEPDERERRGSGRRGSSSRHRERSPEDSYDESPPPSMSDLARKMKKKEKQK
KRKAYEPKLTAEELMDSSTFKRFSASVDNILESLEDIDFNAMDDDEIPQELLLGKHQLSE
LASESAKIKAMGITFRLSSGKLVKVLNILEKNIQDGSKLSTLMNHDADAEDEERLWRDLI
MERVTKSADACLTALNIMTSARMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDP
HGGGLLSSRAKRAKSSTHKQRVIIMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGIT
PFFVESVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDK
DGEPMYIQMVTALVLQLIQCVVHLPNNRDSHDEYDKKVDQDVLITNSYETAMRAAQNFLS
VFLKKCGSKQGEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEM
ALRVASLDYLGTVAARLRKDGVTSKMDQRSIDRILRETQGNDETQQLQKALLDYMDENAE
TDPSLVFARKFYIAQWFRDTLTEMEKAMKSQNQRGDEDSSEGQHHAKDIETTGEIMQRAE
ARKKYLRNIIKTAPSQFSTLRMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVL
GESAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLS
RPQLTEQYYDMLIERILDTGISVRKRVIKILRDICLEQPTFNKITEMCVKMIRRVNDEEG
IKKLVNETFQKLWFTPTPNHDKDAMTRKILNITDVVSACKDTGYDWFEQLLQNLLKTEED
AAYKPARKACVQLVDNLVEHILKYEESLTDIENKGVNSNRLVSCITTLFLFSKIRSQLMV
KHAMTIQPYLTTKCNTQSDFMVICNVAKILELVIPLMEHPSETFLTTIEEDLMKLIIKYG
MTVVQHCVSCLGAVVNRVTRNYKFVWACFNRYYGALTKLKTQHSEDSNNPVLAANKPALL
RSLFTVGALCRHFDFDEEEFKGPTKVVIKEKVMELLLYFTKHEDEEVQTKAIIGLGFQFI
QYPGLMFMQDVMSLYNGILSDRKSSVNLKIQVLKNLQTYLQEEDSRMQEADQQWKKLSKQ
EDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSTVRHFALNVIALTLNQGLIHPVQCVP
YLIAMGTDPEPTMRNKADQQLVEIDKKYSGFIHMKAVAGMKMSYQVQQAIWSAKGTVIRG
YRQDETTSALCAHLFSMVRSNRQHRRAFLISLLNLFDDSSKIEVNMLLYMADNLACFPYQ
IQEEPLFIMHHIDITLSVSGSNLLQSFKESLLKEPRQREKKSKERKYQSEEENSSSSSSS
EEEHNRHSISSNSSDEDNEVVHRPKKPKHRARAPVKSDSDSDLEMEDLDKVMQRLPDNPI
PLLDFANASQGILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYEKAVNRKGHVHFSPH
QTLDFLTSDLANVELTYDIKRRIVKQYLDFKLLMEHLDPDEEDEEGEASASANARNKAIT
SLLGGPSHQDHKNHHQDHKNHHQAPIETDDDESDGDEKTPVSSRRSRKHGDSAEASGHMN
ETLAARDVIALCCPKYKDRPQIARIIQKTNTGYRVQWMAGSYSGVWGEAKKRDGRKTVPW
VDTIKESDIIYKKIALTSAHKLTNRVVQTLRSLYSAKEGTS
NT seq
8046 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgctgggatcgctagccttact
gacttgttaaaccagctgcccctgccatcccctctccccgccaccaccactaagagtctg
ctgttcaatgggaggatcgcggaggaggtcaactgtctgctggcctgccgggatgagaac
ctggtgtcccagctggctcacagcctcaaccaggtttccacagagcacatagagctgaag
gataacctgggcagtgatgacccggagggagacgtgcctgtgctgctgcagacagtgctg
tctaggaaccccaacatcttcagggagaaaaatataatgcagcagccaatgatgccgcag
tacaagatgtcccagaattccatgcatgggagtccggcgtcgacaaactaccagcaaacc
actatctcacacagcccttctagtcgctttgcccctccacagatggggtcggatgccagg
ttcacgccccagcagaacagccctgtgcccagcccctatgctccccaaagccctgctact
tacatgcagcagtaccctcacccacctagctactctcagcaccaacagatccagcaagga
agcccccagaggcctgtgcagccctgcctagaggtgcagacgcagccgcaggcctccccc
caccagaacccctccaccccaaccttagttgccagccccatggttcctggcggcatgcgg
aacatccacgacaacaaggtctccgggcaaatttcaagcaactcagccaatcacaatgcc
agacatggctccaacgaagactacatgaacatagtccacagactagggaatgaggagagt
gatccttccatgagaaatgcctccttcccactccgttcgccccagtctgtttgttcccct
gctagcagcgaagggaccccaaaagcagggttacgacctagcctcatccttcactcccca
cacccttacgcttccccccgtgacagcgctcccgacctcctcctggactctcctgactgc
aagaagaagcagaagaagctaactaaagaggagaaggagcagttggataaagctgctatg
tacgatatcgtcagctctccctctaaagactctaccaagctgaccctcaaactgtcccgg
gtgaagtccactgaaatggaccagtccggagagctcctacctggggcagaggaccaggac
actgacctggcctacaacagcctgcagttctcccggacgcagcaggaccctgcccacagg
ttagggccaggccagggggagcagtcaggctaccaacaggtccctgtgctccagaacact
aagcaggctggaggggtgatcagtggagctgtttacgacgatgctgagatggacgcgctt
gctgagatcgagaggatagaacgggagacgctcatagaaagggagcgctgctccaaagag
gttcaggataaagacaagccactgaagaagcggaagcaggactcgtatcctcaagagcct
ggagctggaggtacagcgggggcaactcaacctggcgtgggagggggcaatgctggcagc
aagctggcaccccaggaggctagtgctgccagtaatggtgcgagccggcctgccctaatg
gtcagcatcgacctgcagcaagcaggtagagctgacgggcagccagaggtaaacataggc
acccacacccctgccctgaggagctggcctgaggaacgcctgtgtcctggggacggcccc
gactccactggagtcctgcggttaaactccaagacagaaggagacacactacagactgca
gacgtacggccagaggtcatcaagcagcgtgccgacacccccaagaagctgggccccgac
gttcgaccggagacccccaaacacaagcacgaaaacagacgagactcttccaaacatcga
cacgatggcaaacctgacaacagcaaggcccgccctgatgccaggatgcctgacaagcca
cgacaacggcacgagggtcgctcagactctggtcacagggaggacaggtcccgggacagt
gacccatcccgcatccgcaggccagagacccccagcaagtccagcaggggggaacatgac
tccaaacatggacgggacagagacagggagcggggggataaggacagggagaggaaacac
aggacagaggcaggggatccacgggaccgacgatctccagagcagcgctccaggccagag
agcccgcgggttaagcaggaaggccgagggggggtggaccacagtgggcgccagaggact
gaccggccaggccccaacctcaaatcccccaataaagaggagaggaggagcggggaggag
aggaggagtggggacggcagcaggaaccgacaggactctaagcagcaacctgctgaaaac
aagcaggagttccctgcttacctgctggggggcgtaaagtctggaggctttaagaacttt
gtgattcccaaagtgaagcgggataaggatgggcatgtgttggcagctgagataaggaag
cctggtctgggttcagtagtggagggctggaaggagccccgggtcaagctggagcgactg
gggctggtagagaagatgaagacagcagccaaaccggttgtggtgctgcagaaactcagt
atcgacgaggtgcagaaaatcatcagggagaggaaagatagaagcgcacgcagctccaag
tcctccaagagcagaccctctcattggatttctgagaaagagtccaccatgccactgtgt
gagagggtgaagatgaacaaacgcaagcgcagcaccatcaaggagaagcccaagtacgcc
gaggtcaactcagatgatgacgatgacgacgacgactctgtgacggagtctacgcggaag
cgtcacaagaaggagcgggaaaagacatgggagcctgatgagcgagagaggagaggctca
gggcgcagggggtccagcagccgccaccgtgaacgcagcccagaggattcatacgatgag
tccccaccgcccagcatgagtgaccttgccagaaagatgaagaagaaggagaaacagaag
aaaagaaaggcatacgagcccaagctgacagcagaagaactgatggactcctccacgttc
aagaggttctcagccagtgtggacaacattctggagagcttggaggacattgacttcaat
gctatggatgacgatgagatcccacaggagcttctgctggggaaacaccagctgagtgaa
ctggccagcgaatctgctaagatcaaggccatgggcatcaccttcaggctttcatctggt
aagttggtgaaggtcctgaacatcctggagaaaaacattcaggacgggtccaaactctcc
acactgatgaaccatgacgcagacgcagaagacgaggagcgactgtggcgtgacctcatc
atggagcgcgtgacaaagtcagctgacgcctgtctgactgccctcaacatcatgacgtcg
gcccgcatgcccaaggcggtgtacatcgaggacgtgattgagagggtgctgcagtacacc
aagtttcacctgcaaaacaccctctaccctcagtatgaccctgtctacagagtggaccct
cacggaggtggcttgctgagctccagggctaagagagctaaaagctccacacacaagcag
agggtgatcatcatgctctacaacaaggtgtgtgacatcgtcagcaacatctctgagctc
ctggagatacagctgttgactgacaccaccatcctgcaggtctcctccatgggcatcact
ccattctttgtggagagtgtcagtgagctacagctgtgtgccatcaaactagtgactgcg
gtgttctctcgctatgaaaaacacaggcaactcatcctggaagagatcttcacctctctg
gccagactacccaccagcaaacgcagcctcaggaacttcaggctgaacagcagtgataag
gatggggagcccatgtacatccagatggtcacagctctggtgcttcagcttatccaatgt
gtggtgcacctcccgaacaacagggacagccacgacgagtatgataagaaggtggaccaa
gatgtcctgatcacaaactcttatgagacggcaatgcgagcagctcagaacttcctgtcc
gtcttcctaaagaagtgtggcagtaagcagggagaggaggactatcgcccactgtttgaa
aattttgtccaggacctgctgtctacggtgaacaaaccagagtggccagctgctgagctt
ctcctcagtctgctgggtcgtctactggtgcatcagtttagcaataagcagacagagatg
gctctgagggtggcatcgctagactacctgggcaccgtcgctgcccgcctgcgcaaagac
ggcgtcaccagcaagatggaccagcgctccatcgaccgcatcctcagagagacacaaggc
aatgatgagacccagcagctgcagaaggccctgttggactacatggatgagaacgcagag
acggatccatctctagtttttgccaggaagttctacatcgcccagtggttcagggacact
ttgacagagatggagaaggccatgaagtctcagaaccagcgaggggacgaggactcttct
gaaggccagcaccacgccaaggacatcgagaccaccggagagatcatgcagagagccgag
gcacgcaagaagtacctccgcaacattatcaagaccgcgccctcgcagttcagcacactg
aggatgaactctgacactgtggactatgatgactcctgcctgattgtcagatatttggcc
tctatgaggccattcgctcagagcttcgatatttatttaacacagatcctgagagtgctg
ggggagagtgccatagctgtcagaactaaagccatgaagtgtttgtctgaggtggtggct
gtagaccccagtattctggccaggttggacatgcagcgcggggtccatggtcgtctgatg
gacaactccaccagtgtacgcgaggctgctgtggagctgctggggcgttttgtgttgagc
agaccccagctcacagagcagtactacgacatgctgatcgagaggatactggatacgggt
atcagtgtgaggaagagggtgattaagatccttagagacatctgtctggagcaacccacc
ttcaacaagatcactgagatgtgtgtcaagatgatccgcagggtcaacgacgaggagggc
atcaagaaacttgtgaacgagaccttccagaaactctggttcacccctacacccaatcac
gataaagacgccatgacccgcaagatcctcaacatcacagacgtggtgtctgcatgcaaa
gatacaggctatgactggtttgagcagctgcttcaaaacctgctgaagaccgaggaagat
gccgcctataagccagccagaaaggcctgcgttcagctggtggacaatctagtggaacac
atcctaaaatatgaagagtctctcactgacattgagaacaagggggtgaattccaaccgt
ctggtgtcctgcatcaccaccctctttctgttcagtaaaatccgatcccagctgatggtc
aaacatgccatgaccatccagccttatctcaccaccaagtgcaacacccagagtgacttc
atggtgatctgtaacgtggccaagatccttgagctggtgattcctctgatggagcacccc
tctgagaccttcctcaccaccatagaggaagacctgatgaagctcatcatcaaatacggc
atgacggttgtacaacactgtgtgagctgtcttggagctgtggtgaacagggtcactcgc
aactacaagtttgtttgggcttgtttcaaccgttactatggtgccctgaccaagctgaag
acccagcactctgaggactccaacaaccctgttctggctgctaacaaaccggccttgctg
cgctcgctgttcactgtgggggcactctgtcgccactttgactttgacgaggaggaattc
aagggccccacaaaggttgtgataaaggaaaaagttatggagcttttgctgtacttcact
aagcatgaagatgaggaagttcagaccaaggccatcattggtctaggcttccagttcatc
cagtacccagggctgatgttcatgcaggatgtgatgagtctgtacaatggcatcctgtca
gacaggaagagctctgtcaacctaaagatccaggtgctgaagaacctgcagacatacctg
caggaggaagactcgcgcatgcaggaggccgaccaacagtggaagaagctgtcgaagcag
gaggacctgaaggagatgggtgacatctcgtcaggtatgagcagctccatcatgcagctg
tacctgaagcaggtgctggaggccttcttccacacacagtccaccgtacgacattttgcc
ctcaacgtcattgccctgacactcaaccagggcctcatccatcctgtacagtgtgtgccc
tacctgattgccatgggaacggacccagagcccaccatgaggaataaggcagaccagcag
ctggtggagattgataagaaatacagcggcttcatccatatgaaggccgtggcggggatg
aagatgtcctaccaggtgcagcaggctatctggtcagctaagggtacggtgatccggggt
taccggcaggacgagaccacctccgccctctgcgcccacctcttctccatggtccgatcc
aaccggcagcaccgccgagccttcctcatctcactgctcaacttgtttgatgacagctcg
aagattgaggtcaatatgctcctgtacatggcagacaacctagcctgtttcccctaccag
atccaggaggagcctctcttcatcatgcaccacattgacatcacactgtctgtgtccggc
agcaacctgctgcagtccttcaaggagtcccttctcaaagagccacggcagcgggagaag
aagtcgaaagagaggaagtaccagtcagaggaggagaactcgtcatcatcatcgtcatcg
gaggaggaacataaccgtcacagcatcagctccaacagtagtgacgaggacaacgaggtg
gtccacaggcccaaaaagcccaaacaccgggcccgggcccctgttaagtcagactctgac
tctgacctggaaatggaggacttggacaaggtgatgcagcgtctgcctgacaaccccatt
cccctgttggactttgccaacgcctcacagggaatactactactattggttctaaagcag
catctcaagaacctctacggcttctcagacagtaaaatccaaaagtactctccgacggaa
tcggccaaggtatatgagaaggcggtgaacaggaagggtcacgtgcacttcagccctcac
cagacactggacttcttgacctctgacctggccaacgtagaactcacctacgacatcaag
aggaggatcgtcaaacagtacctagatttcaagttactgatggagcatttggaccctgat
gaggaggatgaggaaggtgaggcgtcagccagcgctaacgccagaaacaaagccatcact
tcattgctgggagggcccagccaccaggaccacaagaaccaccaccaggaccacaagaac
caccaccaggctcctatagagacggacgacgacgagagcgacggagatgagaaaacccca
gtgtcatcgcggcggtcgaggaagcacggcgactctgcagaggcttcaggtcacatgaat
gagacattggccgccagggacgtcatcgccctctgctgccccaagtacaaggaccggccg
cagatcgcccgcatcatccagaagaccaacacgggctacagagtgcaatggatggctggc
tcctactctggagtctggggcgaggctaagaaacgtgacggacgcaaaacggtgccttgg
gtggacactatcaaggagtctgacattatttacaagaaaatcgccttgacgagtgcacac
aagctgacgaacagagtggtgcagactttacggtcactgtactcagcgaaggagggaact
tcctaa
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integrated database retrieval system
