Salvelinus sp. IW2-2015 (Arctic char): 111979931
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Entry
111979931 CDS
T05762
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111979931
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111979931
04147 Exosome [BR:
salp04147
]
111979931
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
111979931
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
111979931
Exosomal proteins of other body fluids (saliva and urine)
111979931
Exosomal proteins of colorectal cancer cells
111979931
Exosomal proteins of melanoma cells
111979931
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
SPATA1_C
BRE1
ADIP
FKBP15
TBCA_PH
HTH_19
Motif
Other DBs
NCBI-GeneID:
111979931
NCBI-ProteinID:
XP_023866394
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Position
LG20:complement(8889048..8891648)
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AA seq
467 aa
AA seq
DB search
MSFSSSSFRSSSSRSMKGSSMGSSRMSMSGGGGMSMSGGGGMSMSMSGGGSRNSGIRAGS
VYGGAGGSGVRISSARASRSFSAGGGSFGGGAGFGGGSSFSMSGGGSDSHVIGNEKFCMQ
NLNDRLATYLAKVHTLEKANAELELKIRQFLEAKTSPSARDYGSSHVIISDLQSKIQEAI
RMNGAVHLSIDNARLAAEDFRMKYETELSMRQSVEADIARLRCVLEELNMSKKDLSMQIE
GLREELVYLKRNHEEELLSMRAQMSGQVHVEVDAAPQEDLSKVMAEIREHYEAVAAKNNR
ELEGWFHAKTEALNKEVAISTEVIQTSRSEISEVKRTLQSLEIELQSQISMKLSMENTFA
ETKNRFSMQLSGYQMQVTSLEEQLVNLRADLQRQGQEYKMLLDIKTRLEMEIAEYRRLLD
GEARSVSSSSSSSSSTTTRKVITVVEQVVDGKVVSSTQSSASSYARH
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccagcagcagcttcagatcctcctcaagcagatccatgaagggctcatct
atgggttcctcgcgtatgtccatgtctggaggtggtggcatgtccatgtctggaggtggt
ggcatgtccatgtccatgtctggtggaggcagccgcaacagtggcattagggccggcagc
gtgtatgggggtgcaggtggctctggggtgcgcatctccagtgccagagcctccaggtcc
ttctctgctggtggtggcagtttcggtggtggtgctggcttcggtggaggctccagcttc
agtatgtctggtggaggaagtgacagtcatgtcatcggcaacgagaagttctgcatgcag
aacctgaacgaccgtctggccacctacctggccaaagttcacaccttggagaaggccaat
gctgagctggagctgaagatccgccagttcctggaggccaagacctcccccagtgctcgc
gactatggttcatcccatgtcatcatcagtgacctccaatccaagatacaggaagccatc
cgtatgaatggtgctgtccatctaagcattgacaatgccaggcttgccgctgaagacttc
agaatgaagtatgagaccgagctgtccatgcgtcagtcagtggaagcagacatcgctagg
ctgaggtgtgttctggaagagctgaatatgtccaaaaaggacctgagcatgcagattgag
gggctgagagaggagttggtctacctcaagagaaaccacgaggaggagctgttgtccatg
cgtgcccagatgagcggccaggtccatgtggaggttgacgctgcaccacaggaagacctc
agcaaagtcatggctgagattcgtgaacactacgaggctgtcgctgccaagaacaacaga
gaactggagggctggttccacgccaagaccgaggcactgaacaaggaggtcgcaattagc
acagaagttatccaaacgtccagatctgaaatttcagaagtcaaacgcacactgcagagt
cttgaaatcgaacttcaatcacaaataagcatgaaattatccatggaaaataccttcgcc
gagacaaagaaccgtttctccatgcagctgtcgggttatcagatgcaggtgactagcttg
gaggaacarttggtaaatctcagggctgacttgcaacgccagggccaggaatacaagatg
ttgctggacatcaagaccaggctggagatggaaatcgctgagtacaggagactgctggac
ggagaggccagaagtgtctcctcctcctcctcctcctcctcctctaccaccaccaggaag
gtcatcacagtggtagaacaggtggtggatgggaaagtggtctcctccacccaatcctca
gcttcttcatatgcacgccactga
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