Salvelinus sp. IW2-2015 (Arctic char): 111980000
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Entry
111980000 CDS
T05762
Name
(RefSeq) lysosome-associated membrane glycoprotein 1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03272
Virion - Hepatitis viruses
salp03273
Virion - Lassa virus and SFTS virus
salp04140
Autophagy - animal
salp04142
Lysosome
salp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111980000
03272 Virion - Hepatitis viruses
111980000
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111980000
04142 Lysosome
111980000
04140 Autophagy - animal
111980000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111980000
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111980000
04090 CD molecules [BR:
salp04090
]
111980000
Membrane trafficking [BR:
salp04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
111980000
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
111980000
Other autophagy associated proteins
RNautophagy/DNautophagy
111980000
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
111980000
CD molecules [BR:
salp04090
]
Proteins
111980000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
Motif
Other DBs
NCBI-GeneID:
111980000
NCBI-ProteinID:
XP_023866460
LinkDB
All DBs
Position
LG2:complement(40348689..40357317)
Genome browser
AA seq
253 aa
AA seq
DB search
MTQQHSRKQPLSIAFIALLAVTLHQSFAATDAPPTAASQTTSPPPAPPGRPERGNYTVTN
SNGTACLMARMGLQLNVSFSSASLNKTVLDVVNLQPNVTKSSGSCDSDSATLLLKADEKT
XNLTLVFSLNATSSKYHLSGVTLSAAWXDMRVXFSASNSSLDYMRGTLGRSYMCREEQTL
AVTLNFSLNTFQLQVQPFGITGDQFGAAEECQLDEDDMLIPIIVGAALAGLVLVVLVAYL
IGRKRSHAGYQTI
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgacacaacaacatagccgcaagcaacctttgtccattgcattcatcgcgcttttagcg
gtcacgttgcatcagagctttgctgccaccgatgccccgcccacggctgcctctcaaacc
acgtctccgcctcctgcacccccgggtcggcccgagagaggcaactacactgtaaccaac
agcaatgggaccgcctgtctgatggcccgcatgggactgcagctcaatgtcagcttcagc
tctgcctctctcaataagactgtgctggacgtggtgaacctgcagcccaacgtgactaag
agctcagggtcatgtgactcggacagcgccaccctactgctgaaggctgacgagaagaca
arcaacctcaccctcgtcttctccctgaatgccacgtccagtaagtaccacctcagtgga
gtgaccctgtcggcagcctggcrggacatgcgtgtgcrcttctcagccagtaacagtagt
ctggactacatgcgtggtaccctggggcgtagttacatgtgtcgtgaggagcagactctg
gctgtgactytgaacttctctctcaacaccttccagctgcaggtgcagcccttcggcatc
accggggaccagtttggagcagcggaggagtgtcagctggatgaggatgacatgttgatc
cccatcatcgtgggcgctgcgctagctggcctggtcctcgtcgttctcgtggcctacctc
atcggcaggaagaggagccacgctggctatcagaccatctaa
DBGET
integrated database retrieval system
