Salvelinus sp. IW2-2015 (Arctic char): 111980048
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Entry
111980048 CDS
T05762
Name
(RefSeq) keratin, type I cytoskeletal 50 kDa
KO
K07604
type I keratin, acidic
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111980048
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111980048
04147 Exosome [BR:
salp04147
]
111980048
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
111980048
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
111980048
Exosomal proteins of other body fluids (saliva and urine)
111980048
Exosomal proteins of colorectal cancer cells
111980048
Exosomal proteins of melanoma cells
111980048
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
FKBP15
TBCA_PH
ATG17_like
TPR_MLP1_2
SupH-like_C
Nuf2_DHR10-like
RelA_AH_RIS
ANC1_spectrin
Plectin_PPL
ATG14
KIF21A
Motif
Other DBs
NCBI-GeneID:
111980048
NCBI-ProteinID:
XP_023866489
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All DBs
Position
LG20:complement(8906393..8909496)
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AA seq
437 aa
AA seq
DB search
MTSFSNRSFVASGGSMRMGYPRYSGGSMGGGQISAMRAGSVYGDAGGSGVRISNASNTYS
AGGGFGMGGGAGGFNVSDSVDVNENKKSTMQNLNDRLATYLDKVRSLETANADLEHKIXM
FLVAKTKTEFHDCTAFKVTIHELQDRIVDATHLNGGIHLAIDNAKLATDDFQAKYEKELA
MRQAVEADINGLRRVLDELTMARSDLEMQIEGLREELTHLKMNHEEDLLAMHNQMSGQVN
VEVDAAPQEDLTKVMAEIRDHYEAIANKNCKDLEGWFNAKSEEINNVVAVSTETLQSSRS
EITEVKRTLQSLEIELQSQLSMKASLEGTLADTQSRYANMLAGYQRQVTSLEDQLGHLRA
DLDRQGQQYRMLLDIKTRLEMEIAEYRRLLDGEFSSPSTATTTNTFLQKVVTYVQEIVDG
EVVNSDAVQEIVDEDKS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgacctccttctcaaaccgcagctttgtggcctctggtggatccatgagaatgggctat
cctcgctattccggtggtagcatgggaggtggacagatcagcgccatgagggccggcagc
gtgtacggggatgcaggtggctccggggtgcgcatctccaatgcctctaacacttactct
gctggtggtggttttggcatgggtggtggggctggtggcttcaacgtgtctgactctgtc
gatgtgaacgagaacaagaaatccaccatgcagaacctgaacgaccgtctggccacttac
ctggacaaggtccgctccctggagacggccaacgctgatctggagcacaagatckgcatg
ttcctggtggccaagaccaagacagaatttcatgactgcactgccttcaaggtcaccatc
catgagctccaagacaggatcgttgatgccactcatttgaatggaggaatccacctggcc
attgacaacgctaagctggccacagatgactttcaagcaaagtatgagaaggagctggct
atgaggcaggctgtggaggccgacatcaatgggctgaggagggtgctggacgagctgacc
atggccagatctgacctggagatgcagattgaggggcttagagaggagttgacccacctc
aagatgaaccacgaggaggacctcttggccatgcataatcagatgagcggccaggtcaac
gtggaggtggacgctgcaccacaggaagacctcaccaaagtcatggctgaaatccgcgac
cactacgaggccatcgctaacaagaactgtaaagatctggagggctggttcaatgccaag
tcagaagaaatcaacaatgtcgtggcagtcagcacagagaccctccaatcatccagatct
gaaatcactgaagttaagcgcacactgcaaagtctagaaatcgaactccaatcccaactc
agcatgaaagcatccctggaaggcaccctggctgatacacagagccgctatgccaatatg
ctagccggctaccagagrcaggtgaccagcctggaggaccagcttggtcatcttcgtgct
gacctggaccgccagggccaacagtacagaatgctactggacatcaagaccaggttggag
atggagatcgctgagtacaggaggctgcttgatggagagttttccagtccgtcaaccgcc
accaccactaatacctttttgcagaaggttgtgacctatgtgcaggagattgttgacggc
gaggtggtcaactcagacgctgtgcaagagatcgtggatgaggataaatcttga
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