Salvelinus sp. IW2-2015 (Arctic char): 111980056
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Entry
111980056 CDS
T05762
Name
(RefSeq) probable inactive glycosyltransferase 25 family member 3
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00310
Lysine degradation
salp00514
Other types of O-glycan biosynthesis
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
111980056
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
111980056
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
salp01003
]
111980056
Enzymes [BR:
salp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
111980056
Glycosyltransferases [BR:
salp01003
]
O-Glycan biosynthesis
O-linked Gal type
111980056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Motif
Other DBs
NCBI-GeneID:
111980056
NCBI-ProteinID:
XP_023866497
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All DBs
Position
LG20:63915306..63933098
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AA seq
366 aa
AA seq
DB search
MVGTGYYRRTAEYFPTRQRHRLGCYPVPMVHSTFLLDMRKTGMKKLAFHPPHQDYSWPFD
DIIVFAFSCRVSEVQMYLCNKVRYGYLNAPAKPHHTIEDDSISFSHLILEATIDGPPMAP
SKYVSLFPKQRDLMGFDEVYLINLRRRQDRRDRMLYSLNELEIDVKVVDAIDGGALNSSD
IKILGVDILPGYYDPFSRRTLTKGEVGCFLSHYHIWKETVPSYLGRKQVKPGDEEVVENV
RNLVVADYSYWTLSYAISLQGAQKLLNAEPLSKMLPVDEFLPIMYDKHTNENYKSHYPNR
NLQAFSTRPLLVQPAQYAGDPKWVSDTETSTLWDDDNVRTDWRGSHKTLKGAPQPEMLQT
SYKDEL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggtagggacaggttactaccggcgtacagckgagtatttccccaccagacagcgccac
cggctgggctgctacccggtacccatggtccactctaccttcctgctggacatgaggaag
acgggcatgaagaagctggccttccacccccctcaccaggactactcctggcccttcgat
gacatcatcgtcttcgccttctcctgycgcgtctcagaggtgcagatgtacctgtgtaac
aaggtgaggtatggttacctgaacgccccagccaagcctcaccacaccatagaggacgac
agcatcagcttcagccatctcatcctggaggccaccatcgatggcccccccatggccccc
tccaaatacgtgagccttttccccaaacagagagacctcatgggcttcgatgaggtgtac
ctgatcaacctgcgtcgtcgtcaggaccgtagagacaggatgctgtattctctcaatgag
ctggagatagatgtcaaggtggtggacgccatagatggaggagctctgaacagcagtgat
ataaagatcctaggagtggacatactgcctggttactatgacccgttctcccgccgtacc
ctgacaaaaggagaggtgggctgcttcctgagtcattaccacatctggaaggagactgtc
cccagttacctgggccgtaagcaggtgaagccaggtgatgaggaggtggtggagaacgtg
aggaacctggtggtagcagactattcctactggaccctgtcctacgccatctctctccag
ggcgcccagaaactgctcaacgctgaacccctctccaagatgctgcccgtcgatgaattc
ttacccatcatgtatgacaaacacaccaatgagaactacaagtcccactatcctaaccgt
aacctgcaggcgttctccacacgccccctactggtgcaaccagcccaatacgccggggac
cccaagtgggtgagcgacacagagacctccacgctgtgggacgacgacaacgtgcgaaca
gactggaggggctcccacaaaacgctgaagggggctccccaacccgagatgctgcagacg
tcatataaagatgagctgtag
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