KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111980101
Entry
111980101         CDS       T05762                                 
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 5-like
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:salp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    111980101
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:salp03036]
    111980101
Enzymes [BR:salp01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     111980101
Chromosome and associated proteins [BR:salp03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     111980101
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln Clp1
Other DBs
NCBI-GeneID: 111980101
NCBI-ProteinID: XP_023866532
LinkDB
Position
LG20:75180258..75232327
AA seq 1128 aa
MLLRPTVPGLCAMLQTIYETESCFSSDAVSSREQPLELLPQSQVSAMPSAAVEVKTTLPS
GMQSPVGGSEQGVGGGGGPVDLRTDPRLGPLGGGVDPAMREQQLQHELLLLKQQQELQKQ
LLFAEFQKQHEVLTRQHEVQLQEHLKQQQEILAAKRQXELEQKRKLEQQRHEELEKQRLE
QQLLMLRNKEKGKESAIASTEVKLKLQEFLLSKKEPGTPGGLNHSFTHKCWGAHHTSLDP
NSPPQSNTPGTPPSYKLPPLLGSYEGRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLL
RRKDGTVISTFKKRAIEISVSSMCSSAPGSGPSSPNSSNSAIAENGSSGSVPNIHAEQLR
SLHQTLNADGTVSPLSLYTSPSLPNISLGLPANSHLTANQKLLQEAERQAIQTMRQGGAL
TGKFVSTSSLPXSCLPPGMQHDLDSTQAPNSHSSHSSLLQHVLLLEQARQQSALLSVPMY
GQSPLVTGERVSNSMRTVXTLPRHRPLSRTQSAPLPRAPSALSSCLAAAAQHSWRSESNS
VKRGGASSPTAHHPRRQRRSSQRRRRCRRRGRGLSVWGRGVLRSRGSRRKSRGDVAPFRT
PADPLKGESTESDLDEEDDERRGHRVRECDEEGVPYGQHHLQQLNVFQRPXSISGMPHRP
LGRAQSSXATASVKGAPMGEVPIKHLFTTGLVYDTFMLKHQCMCGNTHIHPEHAGRIQSV
WSRLQETGLLGRCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQK
MYAVLPCGGIGVDSDTVWNEMHSSGAVRMAVGCVIELAFKVAAGELKNGFAVVRPPGHHA
EESTAMGFCFFNSVAITAKLLQQKLGVSKILIVDWDIHHGNGTQQAFYNDPNVLYISMHR
YDDGNFFPGSGAPEEVGVGPGVGFNTNIAWTGGVEPPMGDVEYLTAFRTVVMPIANEFSP
DVVLVSAGFDAVEGHQSPLGGYNVTAKCFGHLTKQLMKLAGGRVVLALEGGHDLTAICDA
SESCVAALLGDELDPLPQAVLQQKPCPKAAASLERVIEIQSKHWSSLQRLAPTVGQSLMD
AQRREKDEADTVTAMASLTVDTEQAAASTVSTETSRSTEEPMEEEPVL
NT seq 3387 nt   +upstreamnt  +downstreamnt
atgcttttaaggcccactgtgccggggctgtgcgcaatgttgcagaccatctatgagacc
gagtcctgcttctcctcagacgccgtgtccagcagggagcaacctctggagctgcttccc
cagtcccaagtgtctgccatgcccagtgctgctgtggaggtgaagacaactctcccctcg
gggatgcagagccctgtgggcggcagtgagcagggtgttggaggtggcggcggtcccgtg
gacctgaggacagatcccaggctgggacccctgggtggaggggtggacccagccatgagg
gagcagcaactgcagcatgaactgctcctcctcaagcagcagcaggagcttcagaaacag
cttctcttcgctgagttccagaagcagcatgaggtgctgacacgccagcatgaggttcag
ctgcaggagcacctgaagcagcagcaggagatcctggcggccaagcggcagcwggagctg
gagcagaagaggaagctggagcagcagaggcatgaggagctggagaaacagaggctggag
cagcagctcctcatgctacgcaacaaggagaagggcaaagagagtgccattgccagtacg
gaggtgaagctgaagctccaggagttcctcctgagcaaaaaagagcctggcacacctggc
ggactaaaccattccttcacccataaatgctggggggcccaccacacctctctggacccc
aactccccccctcagagtaacactccaggaacgccgccctcctacaaactacccccgcta
ctggggtcctacgagggcagggatgatttccctctccggaagactgcctccgagcccaat
ctgaaggtgcgttcgcggttaaaacagaaggtagctgagagacggagcagtcctctgctg
aggaggaaggacgggacagtgataagcaccttcaaaaagagagccatcgagatctctgtg
tcctccatgtgcagcagtgcccctggctccgggcccagctcgcccaacagctccaacagc
gccatcgcagagaacggctccagcggctctgtccccaacatccacgckgagcagctgcgg
tccctccaccagacccttaacgctgatgggacagtcagtccgctgagcctctacacatcc
ccctcgctgcccaacatctccctgggcctgccagccaactcgcacctcaccgccaatcag
aagctgttgcaggaggcggagaggcaggccatccagaccatgcgtcagggtggggctctg
acgggcaagtttgtcagcacctcgtccctgccggrgtcatgcctgccacctggmatgcaa
cacgacttagactccacccaggcccccaacagccacagcagtcactcctccctactgcag
cacgtcctcctgctggagcaggcccgccagcagagtgccctcctctcagtccccatgtac
ggtcagtcgccgttggtgacaggggagcgggtgtccaacagtatgcgcacggtgnacacg
ctaccacgccaccggcccctgagtcgcacacagtctgcacccctccccagagcccccagc
gccctcagcagctgtctagcagcagcagcacagcattcctggagaagcgaaagcaattct
gtcaaaaggggtggagcttcctcgccaaccgcccaccacccgaggagacagaggaggagc
tcacagagacgcaggagatgcaggaggagggggcggggtctgagcgtctgggggaggggc
gtcctcaggagcagaggctccagaaggaagagtcggggagacgtcgcccccttcagaacg
cctgctgaccccctgaagggcgagagcacagagagcgatttggatgaagaagatgatgaa
agacgaggccatcgagtgcgggagtgtgatgaggagggcgtaccttacggccaacatcac
ctgcaacagctcaatgtgttccagcgtcctnnttccatttcgggcatgcctcacagacct
ctgggaagggcccagtcctccnctgccactgccagcgtcaagggggctcccatgggtgag
gtccccatcaagcacctcttcactacagggttggtgtacgacacctttatgctgaagcac
cagtgtatgtgtgggaacacccacatccacccagagcacgccggccgcatccagagtgtg
tggtcccggctgcaggagactgggctgctgggccgctgtgagaggattcgggggaggaag
gccacgttggatgagatccagactgtgcattcagaataccacacactgctgtatggcacc
agtcccctcaacagacagaaactagacagcaagaagctcttaggtccaatcagtcagaag
atgtatgctgtgttgccctgtggaggcattggggtggacagtgacactgtgtggaatgag
atgcactcctcgggcgctgtcagaatggctgttggctgcgtcatcgagctggctttcaaa
gtggccgccggggaactgaagaacggctttgccgtggtgcgtccaccaggccatcacgct
gaggaatccactgccatgggcttctgcttcttcaactcagtggccatcacagccaagctg
ctacagcagaaactaggagtgagcaagatactcattgtggactgggatattcaccatggt
aacgggacacagcaggctttttacaacgaccccaacgtactttacatttccatgcatcgc
tacgacgatggaaacttcttccccggcagtggggctcctgaagaggtgggggttggacct
ggtgttggcttcaacacaaacatcgcttggacagggggtgtagaaccgcccatgggggac
gtggagtacctgactgccttcaggacggtggtgatgcccatagccaacgagttctcccct
gacgtggtcctagtgtccgctgggtttgatgccgtggagggccaccagtcccctctggga
ggatacaacgtcactgctaaatgtttcggccacctcaccaagcagctaatgaagctggcg
gggggacgtgtggtcctggcgctggaaggaggtcacgacctcacggccatctgtgacgcc
tccgagtcctgcgtggcggccctgctcggcgatgagttggaccccctgccacaggctgtc
ctgcaacagaagccctgtccaaaagctgctgcctctctggagagggtcatcgagatacag
agtaaacactggagctctctccaaaggttggctcccacggtgggccagtccttaatggat
gcccagcggagagagaaggacgaggccgacacggtcactgccatggcatcgcttaccgtg
gatactgagcaggccgccgcttccaccgtctccacggagaccagcaggtctacagaagag
ccaatggaagaggagcctgtcttgtag

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