Salvelinus sp. IW2-2015 (Arctic char): 111980115
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Entry
111980115 CDS
T05762
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salp03016
]
111980115
Transfer RNA biogenesis [BR:
salp03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
111980115
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
111980115
NCBI-ProteinID:
XP_024003498
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Position
LG20:77036342..77042096
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AA seq
512 aa
AA seq
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MADQNKTSAKVEFGNELLNPSELFEARTRSHKIPVRGQKDFIPTGADQQRDRLQQSLDEH
WNLVSEERVERLGNLVKAVWIPSDMIVELQSPAGKFWQTMGFSAHGKQCLHPEEALYLME
CGNLQVFYQDLPLSIQAGYERFLYSKTMSIQHYQVFGHLKRLGYVVNRFDPSSVPSQYER
QLNLPQSRDRSGRLPKRKRSHSPTSRHTGTQKGPTSKRMEEEKDCNREEEDKNPDSLPDI
SAPDIDEIQTTSHVDPTTSTEGGQGRSWWSKEGSPDPDSELPGQPQSSPRWDFSSIPFPD
LGSRRWLPSSLTSPDPCXLPGAVGSVGACDVXPWXQRLNLREVRMSXREXERERDRDRYR
RDXNQDREVRRCRNWAEYQELQERRIQRSRRDRPAHLWEGPVTPLHDPAQVTSTGELLDK
ISVIKSTRLLEGASSLKDSEEWRICFNFYQSPGKPYSRMCVCSFDGPVPDLWTLKLLAFQ
SGDVPVTYAVVDHGDISFYSFKDFQIPTDVSF
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaaaacaaaacatcagctaaagtagaattcggcaatgaattactaaaccca
tctgagctgttcgaagcccgcacgcgcagccacaagatcccggtgcgcgggcagaaggat
ttcattcccactggggcggatcagcaaagggataggcttcagcagagtttggacgagcac
tggaatctagtatctgaggagcgagtggagaggttagggaacctggtgaaggcagtgtgg
attcccagtgacatgatagtggagctgcagtcaccagcagggaagttttggcagactatg
gggttttctgcccatggtaagcaatgtctacatccagaagaggctctctatctaatggag
tgtggaaacctgcaggtgttctaccaagacctgccactgtccatccaagcgggctatgag
agatttctatactcgaagacaatgagtatacagcattaccaggtttttggccatttgaag
cgacttggttatgtggtgaacagatttgatcccagttctgtgccatcgcagtatgagagg
cagttgaacctgccccagtcccgagacagatcaggaagacttccgaagaggaaacgcagc
cacagccccacctccaggcacacaggaacacagaagggccccacttctaagagaatggag
gaggagaaagactgcaacagagaggaagaggacaagaatcctgactctcttccagatatt
tcagccccagacattgacgaaatccagacaacatcacacgttgaccccaccacttcaacc
gagggtggccagggcaggagctggtggtcaaaggaaggctccccagaccctgactctgag
ctgccaggtcagccccagagctcccctcgctgggacttcagctccatccccttcccagac
ctgggctccagacgctggctccccagcagcctgacctccccagacccctgcrtgctyccc
ggggctgtggggtcagtgggggcctgcgatgtggrcccctggrtgcagaggctcaacctg
cgggaggtgaggatgtcccygcgtgagtgmgagagggagcgggacagggaccggtaccgg
agggacatraaccaggacagagaggtacgacgttgcaggaactgggcagagtaccaggag
ctacaggagagaaggattcaacggagccgcagagataggccagcacacctgtgggagggg
ccggtcacacccctacatgaccctgcacaggtcacttcaactggtgagctgctggataaa
atcagtgtgatcaaatccacacggctgctggagggagcatccagtttgaaagattcagag
gagtggagaatctgtttcaacttttaccagtctcctggaaaaccctattctcgcatgtgt
gtgtgcagtttcgatggtccagtgcctgacttgtggacactgaaattgctggctttccag
agtggggacgtcccggtcacctatgcagtggtggaccacggggacatctccttctactcc
ttcaaggacttccagatacccacagacgtgtccttctga
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