Salvelinus sp. IW2-2015 (Arctic char): 111980182
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Entry
111980182 CDS
T05762
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111980182
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111980182
Enzymes [BR:
salp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111980182
Peptidases and inhibitors [BR:
salp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111980182
Ubiquitin system [BR:
salp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111980182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
DUF2014
Motif
Other DBs
NCBI-GeneID:
111980182
NCBI-ProteinID:
XP_023866626
LinkDB
All DBs
Position
LG2:40760990..40841858
Genome browser
AA seq
2629 aa
AA seq
DB search
MTATTRGSPVGGNDSQSGQGQAPDAQSQSQPPLPQNQTSSPNSSNENSPVSPPDEQGQGD
GPPQLEEEVEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIELSKKELDVKC
EACQRFFRDGLTISFTKILTDEAVSGWKFEIHRCIISNTHRLVELCVAKLSQDWFPLLEL
LAMAFNPHCKFHIYNGTRPSETVPAGAQLADDELFARPPDPRSPKGWLVDLINKFGTLNG
FQTLHDRFISGQALNVQIIAALIKPFGQCYEFLTLHTVKKYXLPVIEMVPQFLENLTDEE
LKKEAKNEAKNDALSMIIKSLKNLASKVPGQEETVKNLEIFRLKMILRLLQISSFNGKMN
ALNEVNKVISSVSYYTHRHGNPEEEXWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKL
EKILRFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFK
ASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHI
KILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRS
PHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKAEQAEFDPQTVRVGSRYSHVQ
EVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGDEPDLD
PDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLD
YLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASYDTLCV
LEGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKHITLIVRF
PNQGRQVDDLDIWSHTNDTIGSVRRGILTRIKANATHTKIELFIGGEVVDPADDRKLIGQ
LNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHFSEGPNPEVESCLPGVIMS
LHLRYVSFLWQVADLGCSPNMPLLRDGARVLMKLMPPDNSTVESLRGVCLDHAKLGENGL
SPTLDSRFFGPSPSQVLYLIEVVYALLMPAGSTLGEDASDFQYNFLKSGGLPLVLSMLTR
NNFLPSADMETRRGAYLNALKIGKLLLTAIGFGHVKAVAEACQPNAEGTTPVSPINQATH
DQALVLQSALQNLPNPASECMLRNVAIRLAQQISDENFFQASKYIPEICVIRAVQKIAWA
SGCGTVQLVFSSNEEISKIYDKTNVVKEPDGEDEQVCCEALEVMTLCFALLPTALDTLSK
EKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGSTAKER
AKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKKIRDEVKRTGETGVEETILE
GHIGVTKELLAFQTPEKKYYIGCENGGANLIKELIDDFIFPASNVYLQYMKSGEFPTEQA
IPVCSSPASINAGFELLVALSVSCVWNLKQIVNMLTDMYYLGCEALTEWEYLPPVGPRPT
KGFVGLKNAGATCYMNSVIQQLYMIPPIRDGILAIEGTGTDVDDDMSGDEKQESESNADP
RDEVFSYNHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFGHLASSRLQYYVPRGFWKQFRL
WGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYEC
EESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVL
AIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQVIQQNEPS
DPEPPGSSKYRLVGVLVHSGQASGGHYYSYITQRNVGGADGERNRWYKFDDGDVTECKMD
DEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSMDKDSELVKYIQE
LTISSSSNNKPSHQVKMPNVIECSVRKQNVQFMHNRMQYSLEYFQFVKKLLTCNSVYLNP
PPGQDHLLPDAEEMAMISVQLAARFLFSTGFHTKKVVRGAASDWYDALCILLRHSKNVRY
WFAHNILFAYANRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPTASPAGATTQ
SQACDNLRLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLSVPA
TFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVAARMQSSINGNPPLPNPYGDAN
QTTPVMPVQQLVGEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQFSSTVLSELLW
QVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKR
AYQCIKCMVALFSSCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWS
PPVQSNETSNGYFLERSHSARMTLAKACELCPEECHLTKPGEAMSEEDAAMRKSSSPQQL
LPGDGTGPQQHTEPDGQEASEDQDTSPPEDTSLYPHSSPGTTTQFQQNNPPHGQLYTGPA
AQLMNNPQRPGPAPSTPGPDPGPGPRAQENWESTEEVPSTSTAPTSPKE
NT seq
7890 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaccacgcgtggctctccggtggggggcaacgacagccagtcgggccagggc
caggcacccgatgcccagagtcagagccagcccccgctgccacagaaccagacgtcgtcc
cctaactcgtccaatgagaactctccagtgagccccccggatgagcagggtcagggggat
ggacccccacagctggaggaggaggtggaggagccagccttccctcacacagacctggcc
aagctggatgacatgatcaacagaccccgctgggtggttccagttctgccaaagggagag
ttggaggttcttctagaagctgctatagagcttagtaaaaaggaacttgatgtgaaatgt
gaggcgtgccagaggtttttcagggacggcctgaccatctctttcaccaagattctcaca
gacgaggccgtcagcgggtggaagttcgagatacataggtgtatcatcagcaacacccac
cggctggtggagctgtgtgtggccaagctctctcaggactggttccccttgctggagctg
ctggccatggccttcaacccccactgcaagtttcacatctacaatggcacgaggccctct
gagacggtgcccgccggggcgcagcttgcagacgacgagctcttcgcccgcccccctgac
cctcgctctccaaagggctggttggtggatttaattaacaaattcggcacgttaaayggg
tttcaaactctgcacgatcgcttcataagtggccaagcactgaacgtccagatcatcgct
gcccttatcaagcctttcgggcagtgttacgagtttctcacgttgcacacggtgaagaag
tacttsctgcccgtcatcgagatggttcctcagttcctggagaatctaacagacgaggag
ctgaagaaggaagccaagaacgaagccaaaaatgatgccctgtccatgatcatcaagtca
ctgaagaacctggcctccaaggtgcctgggcaggaggagaccgtcaagaacttagagatt
tttaggttaaaaatgattcttaggttattgcaaatttcctcttttaatggcaaaatgaat
gcactaaacgaagtaaacaaagtaatctccagtgtgtcctattacacacatcggcatggc
aaccccgaggaggaggaktggctaactgcagaacgcatggcggagtggatccagcagaac
cacatcctgtccattgtgctgagggacagccttcaccagcctcagtacgtagagaaacta
gagaagatactgcgcttcgtcatcaaggagaaagctcttaccatgcaggacctggacaac
atctgggctgcacaggctggtaaacatgaggccattgtgaagaacgtacacgaccttctg
gccaagctggcctgggacttctctcctgagcagcttgaccacctctttgactgcttcaag
gcgagttggacgaatgccagtaagaagcaacgtgagaagctgttggaactgatccgtcgc
ttggcggaggacgacaaggatggagtgatggcccacaaggtgctgaacctgttgtggaac
ctggctcacagcgatgatgtgcctgtagacatcatggaccaggccctcagtgctcacatc
aagatactggactacagttgctctcaggatagagacacgcagaagatccagtggatcgat
cgcttcatagaagagttgcgcaccaatgacaaatgggtgattcctgcactaaagcagatc
cgagagatctgtagcctgttcggagaggctcctcagaatctcagtcagacccagaggagt
cctcatgtgttctatcgtcatgacctgattaaccagctgcaacacaaccatgccctggtc
acgctggtggctgagaacctctctgcctacatggagaccatgaggcagttctctaaagcc
gagcaggcggagtttgacccccagacggtgagggtagggagccgctacagccacgtacag
gaagtccaggagagactcaacttcctgaggttcctgctgaaggacggccagttgtggctc
tgtgctcctcaggccaaacagatctggaagtgcctggctgagaacgcagtctttctttgt
gaccgagaggcctgcttcaaatggtactcgaagctgatgggagatgagccagacctggac
ccggacatcaacaaggacttctttgagaacaacgttctgcagctggacccgtctctgctc
acggagaacggcatgaagtgctttgagaggttcttcaaggccgtcaactgcagggagggc
aagctggtggccaaacgcagggcctacatgatggacgacctggaactcataggcctggac
tacctctggagggtcgtaattcaagggagcgatgacatcgccagtcgagccatagacctg
ctgaaagagatctacaccaaccttggaccaaaactacaagtcaatcaggtagagatccac
gaggatttcatccagtcatgtttcgaccgcctgaaggcgtcgtacgatacgctgtgtgtc
ctggaaggggacaaggacagcatcaactgtgcccggcaggaggccatccgcatggtccgc
gtgctcactgtgctcaaggagtacatcaacgagtgtgacagtgactaccatgaggagagg
accatactgcccatgtccagggcgtttcgggggaagcacatcacgttgatcgtgcgtttc
cctaaccagggccgtcaggtggatgacctagacatctggtctcacaccaacgacaccatt
ggctcagtgcgccgcggtatcctcacacgcatcaaggccaacgctacgcacaccaaaata
gagctmttcattggcggggaggtcgtcgacccagccgacgacaggaagctgattggccag
ctcaacctgaaagacaaaacgttgatcacagccaagctgacccaggtgagtgccaacatg
ccctccagcccagacagctcctcggactcttccactggctcaccgggtaaccatggcaac
cacttcagcgaagggcccaaccccgaggtggagagctgcctccctggagtgatcatgtct
ctccacctgcgctacgtctccttcctgtggcaggtagcagacctgggctgtagccccaac
atgcctctgctacgagacggagccagagtactcatgaagctgatgcctccagataacagt
accgtggagagcctgcgtggtgtatgtctggaccatgccaagctgggggagaacggcctc
agcccaacactggactcacgcttctttggcccctcgccatcacaagtcctctacctcata
gaggtggtgtatgccctgctcatgccagccggctccacattgggtgaggacgccagcgac
ttccagtacaacttcctgaagagtggcgggctaccgctggtactgagcatgctcacgcgg
aacaacttcctgccgtcggccgacatggagacgcggcgaggggcgtacctcaacgctctt
aagatcggcaaactgctgctcactgctattgggttcggacacgtcaaagctgtggccgag
gcctgccagcccaacgctgaggggaccacacccgtctcaccgatcaaccaggccactcat
gaccaggctttggtcctccagagtgccctgcagaacctccccaaccctgcctctgagtgc
atgctccgcaatgtagctatacgcctggcccaacagatctctgacgagaacttcttccag
gcgtcgaagtacatccctgagatctgtgtgatccgggcggtgcagaagatagcgtgggct
tcaggctgtggcaccgtacagctggtcttcagctccaacgaagagatcagcaagatctat
gacaagacgaacgtggttaaggagccggacggggaggatgagcaggtgtgttgtgaggcc
ctggaggtcatgaccctgtgtttcgccctgctgcccaccgctctggacacactcagtaag
gagaaggcctggcagaccttcatcatagacctgctactgcactgccacagcaagtcagtt
cgtcagatggcccaggagcagttcttccttatggccaccaggtgctgcatgggccaccga
cccctcctcttcttcatcaccctcctcttcactgtgctggggagcacagctaaagagcgg
gccaagcatgctggggactacttcaccctgctcaggcacctcctgaactacgcctacaac
agcaacatcaacctgcccaacgcagaggtgctgctcaacaatgagattgactggctcaag
aagatcagggatgaggtgaagaggacaggggagacgggcgttgaggagaccatcctggag
ggacacatcggagttaccaaggagctgctggccttccagacaccagagaagaagtactac
atcggctgtgagaatggaggggccaacctcatcaaggagttgatagacgacttcattttc
ccagcgtctaacgtgtacctgcagtacatgaagagtggggagttccctacggagcaggcc
atccctgtctgtagcagccctgcctccatcaacgcaggcttcgagctgctggtggctctg
tcagtgagctgtgtctggaacctcaagcagatcgtcaacatgctcactgacatgtactac
ctaggttgtgaggctctgacagagtgggagtatctccctccggtggggccgcggcccact
aaaggctttgtggggctgaagaacgctggggccacctgctacatgaactcagtcatccag
cagctctacatgatccctcccatccgcgacggaatcctggccatcgagggcaccggcacc
gacgtggacgatgacatgtccggcgacgagaagcaggagagcgagagtaacgcagaccca
cgggatgaggtgtttagctataaccaccagtttgacgacaagccgtcgctcagtaagtcg
gaggacaggaaggagtacaacattggggtgctgcgccacctgcaggtcatctttggtcac
ctggcctcctccagactgcagtactacgtaccccggggcttctggaaacagttcaggtta
tggggtgagccggtgaacctgcgagagcagcacgatgccctggagttcttcaactcccta
gtggacagtctggacgaggctctgaaggccctgggtcacccggccatgcttagcaaggtg
ctggggggatccttcgccgaccagaagatctgccaggggtgcccacatagatatgagtgt
gaggagtcgttcaccactctgaatgtagacatcaggaaccaccagaacctgttggactct
atggagcagtatgtcaaaggagacctgctggagggagccaacgcataccactgtgagaag
tgtaacaagaaggtggacacagtgaagcgtctgctgatcaagaagcttcctccagtgctg
gccatccagctgaagaggtttgactacgactgggagagggagtgtgccattaagttcaac
gactactttgagttccccagggagttggacatggagccctacactgtagccggggtggcc
aagctggagggggacgacgtcaacccagagaaccaggtgatccagcagaacgagccctct
gacccagagcccccgggcagctccaagtaccgcctggtgggggtgctggtccactcaggc
caggccagcggcggacactactactcctacatcacgcagaggaacgtgggcggggccgac
ggcgagcggaaccgctggtacaagtttgacgacggcgacgtgaccgagtgcaagatggac
gacgaggaggagatgaagaaccagtgcttcggaggggagtacatgggcgaggtgtttgac
cacatgatgaagaggatgtcctaccggcgccagaagcgctggtggaatgcctacatcctc
ttctacgaacgcatggactcaatggacaaggacagtgagctggtcaagtacatccaggag
ctgaccatctcgtcctcgtccaacaacaagccgtcgcaccaggtcaagatgcccaacgtg
atcgagtgcagcgtgcgcaagcagaacgtgcagttcatgcacaaccgtatgcaatacagc
ctggagtatttccagtttgttaagaaacttctgacctgtaacagtgtctatttaaaccct
ccgccaggacaagaccatctactgcccgatgcagaggagatggctatgattagtgttcag
ctggctgctaggttcctcttcagcactggtttccacaccaagaaagtagtgcggggggcc
gccagtgactggtatgatgcgctgtgcatcctgctgagacacagtaagaatgtacgctac
tggtttgcacacaacatcctgtttgcctacgccaaccgcttctccgagtacctgctggag
tgccccagcgctgaggtccggggcgcgttcgccaaactcatcgtcttcattgcacacttc
tcccttcaagacggaccctgcccctcgcccacagcatcccctgccggcgccaccacccaa
tcacaggcgtgtgataacctgcgtctcagtgaccacctgttgagggctgtgctgaacctc
ctcaggagagaggtgtcagagcatggccgacacctgcagcagtacttcaacctcttcgtc
atgtacgccaatttggggctggcagagaagactcagttgttgaagctgagtgtcccagct
accttcatgctggtggctctagacgagggacccggtcctcccataaagtaccagtatgca
gagctggggaaactctacaccgtggtctcccagctggtgcgctgctgtgatgtggccgca
cgcatgcagtcatccatcaatggtaacccccctctccctaacccgtacggcgatgccaac
cagaccaccccggtgatgcctgtgcagcagctggtgggagagatcctttttgttaggacc
agctacgtgaagaagattatcgaggactgcagcaactcagaggagacagtcaagctgctg
cgcttcagctgctgggaaaacccccagttctcctctactgtactatcagagctgctctgg
caggtggcgtactcctacacctacgagctgaggccttacctggacctgctgctgcagatc
ctgctcatcgaggactcctggcagacacacaggatccacaacgtgttgaagggtatacca
gacgacagggacggcctgtttgacaccattcagcgctccaaaaaccactaccagaaacgg
gcctaccagtgtatcaagtgcatggtggccctgttcagcagctgctctgtggcctaccag
atcctacagagtaacggggacctgaagcgtaagtggacctgggcggtggagtggctgggg
gatgagctggagaggagaccctacacaggaaacccacagtacacctacaacaactggtct
ccacccgtccagagcaacgagacctccaacgggtacttcctggagcgctcgcactctgca
cgtatgaccctggccaaggcctgcgaactctgccccgaggagtgtcacttaacgaagccc
ggtgaggccatgtctgaagaagacgctgccatgcggaaatcgtcctcgccacagcagctt
ttgccaggggacgggacaggaccacagcaacacactgagcccgatggccaggaagcctct
gaagatcaggacacctcccctccagaggacacctccctctacccacactcatctcctggg
acgaccacacagtttcagcagaacaaccccccccacggacagctatacacaggccccgct
gcccagctcatgaacaacccccagcgccctggccctgccccttctaccccaggccctgac
cccggccccggcccaagagcacaagaaaactgggagagcactgaggaggtcccctccacc
tccacggcccctacctcacctaaggaataa
DBGET
integrated database retrieval system
