Salvelinus sp. IW2-2015 (Arctic char): 111980193
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Entry
111980193 CDS
T05762
Name
(RefSeq) interferon beta-like
KO
K05414
interferon alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04060
Cytokine-cytokine receptor interaction
salp04217
Necroptosis
salp04620
Toll-like receptor signaling pathway
salp04621
NOD-like receptor signaling pathway
salp04622
RIG-I-like receptor signaling pathway
salp04623
Cytosolic DNA-sensing pathway
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111980193
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
111980193
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111980193
04621 NOD-like receptor signaling pathway
111980193
04622 RIG-I-like receptor signaling pathway
111980193
04623 Cytosolic DNA-sensing pathway
111980193
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111980193
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
salp04052
]
111980193
Cytokines and neuropeptides [BR:
salp04052
]
Cytokines
Interferons
111980193
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Motif
Other DBs
NCBI-GeneID:
111980193
NCBI-ProteinID:
XP_023866632
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Position
LG20:10701844..10702829
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AA seq
187 aa
AA seq
DB search
MALQTITWMSTFLCLAQVCSMPMPCQLQGQLVRVTHNLLRDMGGNFPLECLQENVFMAFP
ATAFTTSGAPLLSSSGAKAIYETLKNIDTLFGADDMPTKWDQRKLENFQNIVYRQIEESK
CMMGSVDTCDYLVRAKVLKTYFGNIAAVLKEKNFSYCAWEVVRKELLYTLQFILEHNSDR
LLWANRT
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggcacttcagactatcacttggatgagcactttcctctgccttgcgcaagtttgctcc
atgcccatgccytgccagctacaaggacagctggtgcgagtaacccacaacctactgaga
gacatggggggtaattttcctctggagtgtctgcaggagaatgtcttcatggcattccca
gccactgctttcacaacctccggcgcgccactgttgagcagcagtggtgctaaggctatt
tatgagacattgaagaacatcgacacattgtttggagctgacgacatgcctactaagtgg
gaccaacggaagttggagaattttcagaatattgtataccgccagattgaagagagcaaa
tgtatgatggggagcgtggatacatgtgattatctagtcagggcaaaggtgctgaagaca
tattttgggaacatcgcagctgtccttaaagaaaaaaatttcagttactgtgcctgggaa
gtggttcgaaaagagctcctgtacaccctgcagttcattctggaacacaactctgacaga
cttctgtgggccaacagaacatga
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