Salvelinus sp. IW2-2015 (Arctic char): 111980219
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Entry
111980219 CDS
T05762
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04517
IgSF CAM signaling
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111980219
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111980219
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111980219
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
111980219
Intermediate filaments
Intermediate filament-binding proteins
111980219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
111980219
NCBI-ProteinID:
XP_023866672
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All DBs
Position
LG20:complement(44246247..44277552)
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AA seq
1627 aa
AA seq
DB search
MLMGAGRDTARDEAQKLHRKWLKHQAFMTELARNKEWLAKIEQEGQELIDEKPELRSVVQ
QKLEEIRECWTDLESTTKAKARALFENNKPEPVVKSYSDLDHQLSGLEKQPPQLEQAHHL
PTFNEQLHKFQSQMGDLYKDVGELGSLQGVCLPQRGSLVKAGEGEGGEQPAVVETRIVRL
IEPLKERRRILLASKEMHQVAQDLEEEILWIQERLPLASSKDYGNNLQSVQQHVKINQTL
QRDLQGRRARVEEVLDRAGIIASLRTPEVDFVREGAGHVRQLWEVLRLEAERRSVMLDVV
LQAQQYYSEAAKVESWLAGQKLHLISEEKGMDEASTLQLLKEHLALEAMVENYAETVGML
SQQCQRQLELAHPDSEGITKQQSHIDRLYVSLKDMVEHRKTKLEQQYWMYQLNREVEELE
KWITEREAVASSTELGQDLEDVTMLQEKFTKFCSETNSIGQQRMEQVNKMVNEMIDCGHT
DAATIAEWKDGLNESWADLLELMETRGQMLTASYQLHKFFTDCKEVLVQIAGKMRQLPEV
RACQASIANPATLQRLMRSFEHALQLLVSQVRQLQENAAQLRAIYAGEKAEAIMSKEQEV
MSAWKELLVSCEASRVQVTSVTDKVQFFSVVREHLMWMEGIMGQIGGDDPRDSSSAEVMM
KQHGELKAKMDGRSKTLQQCVELGKILLAAGNPAAEEIKEKLDTLLAKQKDLSERWDKHQ
EKLQRKKDQFQYAQETVKAEAWLKAKEPLINSSSNSREAGGAGGEAQAQTDEVEQLILRH
EAFRKAAATWKERFSSLRQLSNAEKLREEQSSKPAPTPLSSRRMFPSSCLTPTFPLATST
LLRQTVQLHIEPRPKQTSLGMAASASTAAQRLGSTIASYIPVMNGSSYHGLDHQSSSGGL
ESSNYPGLNHQAGGGVDSSSSYLGVNHQTAPPPVDSSGYLGLNHQSSGGMVSPGYLPQNQ
SSGSMGSPGYLPQNQSSGGMGSPGYLPQNQSSGGMGSLGYLPQNQSSGGTGSPGYLPQNQ
SSGGMGSSGYLPQNQSIGGIVSPGYLAQNQHSGGMGSSGYLAQNLSSGSMGSSGYLAQNH
QSSGGMGSSGYLAQNQGSGVMGSSGFLAQNQCSGIMGSSGYLAQNLNSGGMGSSGYLAQN
LSSGGMGSSGYIAQNQGSGCMGSSGYLAQIQGSGGMGSSSYLPQSGGVMDPKMAYAWQHL
KADCMQPRINHIHKAVNPLLEASRAQREQFGDIPMVDMIGPESGLELLHGRLQRDPRGSR
SDPQMDHLRREREYKLGRQTSSEQEIQARLNELPMIVRQERYRRRLERQSSSEQEGSGKA
RTPRQDDSSDMESAKEGSDKRSTEKRATTMAEIVEQAQEREAAQARGETYRPTSSLSAPV
TYERPRARDRPKPRRRPRPKEPEEKRRSRSAPAQSPAQLLPPSHTAHNEGFLYRKHDFEG
QQKSPSSKSWVNLYCVLSKGEIIFYKDAKSITTPYNEETPLDLSVCICDSTMGYKKKKNV
FVIKKNDGNDYIFHAKDEEDLKAWVTNITTSITEHEEIAKWDKPTTSSTDPDRSERKEKS
EGDADARSERSEMGGEVEEEERSEKDRSEKREGSEKTGEGSEKADTSERGEMAEGGAGGS
STSGKSK
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgcttatgggtgcgggacgagacacggcgcgggatgaggcccagaagcttcaccggaaa
tggctgaagcaccaggccttcatgaccgagctggcccgcaacaaagaatggctggccaag
atagagcaggagggtcaggagctgatcgatgagaagccggagctgcgttcggtggtgcag
cagaagctggaggagatcagggagtgctggacggacctggagagcaccaccaaggccaag
gcccgggctctgtttgagaacaacaagccagagccggtggtgaagagctactcagacctg
gaccaccagctctctggcctggagaaacagccccctcagctggagcaggctcaccatctg
cccaccttcaatgagcagctgcataaattccagtctcagatgggggacttgtacaaggac
gtaggggaactaggatccctccagggggtgtgcctcccccagcgaggcagcctggtgaaa
gccggggagggagaagggggcgagcagccagctgtggtggagacccgcatcgtgcgcctc
atcgagcccctgaaggagagacgtcgcatcctgctggcctccaaggagatgcatcaggtc
gcccaggacctggaggaagagatactgtggatccaggagcggcttcctctggcttcctct
aaggattacggcaacaacctgcagagtgttcagcagcatgtcaagatcaaccagacgctg
cagagggatctgcagggtcgccgagcgcgggttgaggaggtgttggaccgggcggggatc
atcgcctctctgcggacccccgaggtggactttgtgcgcgagggggcagggcacgtgcgt
cagctttgggaggtgctgaggctagaggcggagaggaggtctgtgatgctggatgtggtg
ctgcaggcccagcagtactacagcgaggcggccaaggtcgagtcctggctggcaggccag
aaactgcacctcatcagcgaggagaagggtatggacgaagcaagcaccctgcagctgctg
aaggagcacctggccttggaggcgatggtggagaactacgctgagacagtgggcatgctc
tcccagcagtgtcagaggcagctggaactggcacacccagacagtgaggggatcaccaag
cagcagtcccacatagaccgtctgtacgtgtctctgaaggacatggtggagcacaggaag
accaagctggagcagcagtattggatgtaccagctcaacagagaagtggaggagttagag
aagtggatcactgagcgggaggccgttgccagctccactgagctgggccaagacctggaa
gatgtcacgatgctacaagaaaaattcaccaagttctgctcagagaccaacagcataggc
caacagaggatggagcaggtgaataagatggtgaacgagatgatagactgcggccacacg
gacgcggccaccatcgctgagtggaaggatggactgaacgagtcatgggccgacctactg
gagctcatggaaacccgaggacagatgctgacagcatcataccagctgcacaagttcttc
actgactgcaaagaggtcttggttcagattgcggggaagatgaggcaactaccagaggtg
agggcgtgccaagccagcatcgccaacccggccacgctgcagaggctcatgcgctcgttt
gagcacgccctccagctgcttgtctcacaggtaaggcagctgcaggagaacgcagcccag
ctgagggccatctacgccggggaaaaggcagaggccataatgagcaaggaacaggaagtg
atgtcagcatggaaggagttgctggtttcctgtgaggccagtcgcgtgcaggtcacatcg
gtgacagacaaggtccagttcttctcagtggtgcgtgagcatctcatgtggatggaaggc
atcatgggacagattggaggggacgaccccagggattcgtcctctgcggaggtgatgatg
aaacaacatggtgagctgaaagccaagatggacggccgcagtaagaccctacaacagtgt
gtcgagctgggaaagatcctgttggccgcaggcaacccagcagctgaggagataaaggag
aagttggacacactcctggctaagcagaaggatctctctgagagatgggacaaacaccag
gaaaagctacagcgcaagaaggatcagttccagtatgcccaggagacggtgaaggcggag
gcctggctgaaggccaaggagccgctaatcaactccagctccaactccagggaggctggg
ggtgctggaggagaggcccaggctcagactgacgaggtggagcagctcatcctccgccac
gaggccttccgtaaggctgcagccacctggaaggagcgcttcagctcactgagacagctc
tccaacgcagagaagctgagagaagaacagagcagcaagcctgccccaacaccactctcc
agtcggaggatgttcccatcgtcctgcctcactccgacctttccccttgctacctcaact
ctgctgaggcagacggtccagctgcatattgagcccaggcccaagcagactagtctgggg
atggctgcctctgcctccactgcagcccagaggttgggttctaccattgccagctacatt
cctgtcatgaatggctccagttaccatggactggaccatcagagcagcagcggggggttg
gagagttctaactaccctgggctaaaccatcaggccggtggaggtgtggacagcagctcc
agttaccttggagtgaaccatcagactgcccctccgccagtggatagttctggctacctt
ggactgaaccatcaaagcagtgggggtatggttagtccaggctacctacctcaaaatcaa
agtagtgggagtatgggtagtccaggctacctacctcaaaatcaaagtagtgggggtatg
ggtagtccaggttacctgccgcaaaatcaaagcagtgggggtatgggtagtctaggctac
ctgccgcaaaatcaaagtagtgggggtacaggtagtccaggctacctaccgcaaaatcaa
agtagtgggggtatgggtagttcaggctacctgccgcaaaatcaaagtattgggggtata
gttagtccaggctaccttgcgcaaaatcaacacagtggtggtatgggtagctcaggctac
cttgcacaaaatctaagtagtgggagtatgggtagttcaggctacctggctcaaaaccat
caaagcagtggtggtatgggtagttcaggctacctggctcaaaaccaaggtagtggggtt
atgggtagttcaggcttccttgcgcaaaaccaatgtagtgggattatgggtagttcaggg
taccttgcgcaaaatctaaatagtggtggtatgggtagctcaggctaccttgcacaaaat
ctaagtagtgggggtatgggtagttcaggctacattgcacaaaaccaaggtagtgggtgt
atgggtagttcagggtaccttgcgcaaatccaaggtagtggaggtatgggtagttctagc
tatctgcctcaaagcggtggggtcatggaccccaaaatggcatatgcgtggcagcatctg
aaagccgactgcatgcagcccaggatcaaccatatccacaaggctgtcaaccccctcctg
gaggccagcagggcgcagagggaacagtttggggacatccccatggtagacatgatcggg
ccagagtccggcctggagctcctccatggcaggcttcaaagggacccccgcggcagccgc
tccgacccccagatggaccacctgcggcgggagagggagtacaagctgggccgccagacc
tccagcgaacaggagatccaggcacggctcaacgagctgccaatgatcgtgcgtcaggag
cgctataggcgacgcctggagagacagtcgtccagcgagcaggagggcagtgggaaggct
aggacaccgaggcaggacgactccagcgacatggagtcagccaaggaaggctctgacaaa
cgctcaacagagaagagagccaccacaatggctgagattgtggagcaggcccaggagaga
gaggcagcacaagccagaggggagacgtaccgccccaccagcagcctctcagcacccgtg
acctacgagcgcccgcgcgcccgagaccgccccaaaccccgcaggagaccccgccccaaa
gagcctgaggagaagcgacgctctcgctcggctccagcccagagtccggcgcaactcttg
ccgccctcacacactgcccataacgaaggcttcctgtaccgcaaacacgactttgagggc
cagcaaaagagtcccagcagtaagtcgtgggtgaacttgtattgcgtgttgtcaaaagga
gagatcattttctacaaggacgccaagagcatcaccacaccttacaatgaagaaacccca
ctcgacctgagcgtctgtatatgtgatagcaccatgggatacaagaagaagaaaaatgtc
ttcgttatcaagaaaaatgatggcaatgactatattttccacgcaaaggatgaggaggac
ctgaaggcttgggtcactaacatcaccaccagtataactgaacacgaggagatcgccaag
tgggacaaacccacaacctcgtccacagatcctgaccgctcggagaggaaagagaagtca
gagggtgacgcagatgccaggtcagagagatctgagatgggaggagaggtggaggaggaa
gagaggtccgagaaggataggtctgagaagagagaggggtccgagaagacaggcgagggc
tccgagaaggcagacacgtcggagaggggtgagatggcagagggaggggcagggggctcc
agcacgtcagggaagagcaaatga
DBGET
integrated database retrieval system
