Salvelinus sp. IW2-2015 (Arctic char): 111980221
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Entry
111980221 CDS
T05762
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111980221
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111980221
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
111980221
NCBI-ProteinID:
XP_023866674
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Position
LG20:47068219..47074682
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AA seq
1127 aa
AA seq
DB search
MRFPLELISAIQEGNIVMVCGLLNTGDGIIRQLDDSEDRLWREALNLSIRLGNEDTMDTL
LQGIKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDVRSFSLAIFDHSIDDSQ
FAPGVTPLTLACQKDLYEIVTMLTQKGHIIPRPHKISCACLECRNGRQYDLLKFSLSRIN
TYRGIASRAYLSITSEDAMLSAFGLSRELRKLSKKEPEFKPQYLGLEELCQEFAVELLGM
CRNQSEVTTILNSCGDESQDALDQQAFEEGIPNLTRLRLAVNCNQKQFVAHPICQQVLSS
IWCGNLSGWRGSKTAWKLLVSVGIFFTMPLLCLVYWIAPKSKVGKILKIPVIKFLLHSAS
YMWFLITLLGESITMELYRDQFASRQQNILHSSFHMVWVVGFFWYECKEVWIEGLRSYFL
DWWNCMDMMVLSMYLASFTLRVLIMLKGHFLCQAPDGTEECAYFTQTVRQDWHQEDPQLI
AEVLFAVTSMLSFTRLAYILPAQESLGTLQISIGKMIDDMMRFMFILMIIGTAFLCGINN
IYVPYVTQPYLGRFNETFRFLFWTMFGVANQDYVDMPEFVVAEFVGRILYGIFTLVIVIV
LLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPVPFNIIPSPKAFFYLIR
GIFRQICCCCTLNSTPDYPPITSMSNGKEMDGGGSGENQIPYRQQVIRALVQRYIESERR
KFEETKRKDVGNRITELNKVVGRLHAEMKAIMQVLVDSGQAAGDIPNTDGSSILGKYIMG
AKNNFRGFDNKLDNKHTPLRVTVEMGQQGKVAEEKAGAVVMLGDEGMEVEHDRKVEIGKD
GRTAMGLDKKVEMEKEAKDGGMVVKQEVKVDVGLDGTEGTKQVGDMDVVKMEEGRADGRA
EEVVKESEQNMENGGKGEVRVEEMVKETEHKMERRGDSDGKGEKGINKARTNEMVEKRVE
GEASPGKAEVRMEVKDKGKKVDSSVDNTIRDKGVVGGDKTVNEMGGCGNEGKVDMGLEDV
KEVERKVKAMELKEKRVVGKINVAERWDKGEGRAVEENVTEKKAAKAGMVVVENTARAGV
NILGEKVVPSPSGSSSSQDTGFGSQEGEGSINGGPMRPAYLSASSPD
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttcctttggagctgatcagtgccatccaggaggggaacatagtgatggtgtgt
ggcctgctgaatactggtgacggtatcatccgccagctggatgactccgaggaccggctg
tggagagaggccctgaacctgtccatccgcctgggcaacgaggacaccatggacaccctc
ctccagggcattaagtttgactttcgccagatccatgaggctctgctggttgccgtggac
accaaccagccccgcgtggtgaagaggctcctcgaccgcttggaccaggagaagggcaac
aagatggatgtgcgatccttctccctggccatcttcgaccactctatcgacgactcgcag
ttcgccccaggcgtgaccccgctgaccctggcctgtcagaaggacctgtatgagattgtc
accatgctgacccagaagggccacatcatcccacggccacacaagatctcctgtgcctgt
ctagagtgtaggaacgggcggcagtatgacctgctgaagttctccctgtctcgcatcaac
acctaccgtggcattgccagccgggcctacctgtccatcacctcagaagacgccatgctc
agtgccttcggcctcagcagggagctacgcaaactctccaagaaggaacccgagttcaag
cctcagtacttgggtctggaggagctgtgccaggagtttgcggtggagctgctggggatg
tgccgtaaccagagtgaggtcaccactatcctgaacagctgtggagatgaaagccaggac
gcccttgaccagcaggccttcgaggagggcatccccaacctgacccgcctgaggcttgca
gtcaactgcaaccaaaaacagtttgtagcccaccctatctgccagcaggtgctgtcctct
atttggtgtgggaacctgtctggctggagaggcagcaagacggcctggaagctgctggtg
tctgtggggatcttcttcaccatgcccctcctctgcctcgtctactggattgcacccaag
tccaaggtgggaaagatactgaagattccggtgataaagttccttcttcactctgcctcc
tacatgtggttcctcatcacattgttgggagagtccatcaccatggagttgtacagagat
cagtttgcttcgcgtcagcagaatattctgcacagctcattccacatggtgtgggtggtc
gggttcttctggtatgaatgtaaggaggtgtggattgaaggtctgcggagctacttcctg
gactggtggaactgcatggacatgatggtgctcagcatgtacttggcctccttcactctg
cgcgtcctcatcatgctcaaaggtcacttcctgtgccaggcccctgacgggactgaggag
tgtgcctacttcacccagactgtgcgccaggactggcatcaggaggacccccagctcata
gctgaggtactgtttgcagtgaccagtatgctgagcttcacccgcttggcctacatcctg
cctgcacaggagtccctgggtacactccagatctccatagggaagatgatcgatgacatg
atgaggttcatgttcatattgatgattattggaactgcattcctctgtggtatcaataac
atctatgttccttatgtcacccaaccatatcttggaaggtttaacgagacctttcgtttc
ctgttctggaccatgtttggggtggccaaccaggactatgtggacatgcccgagtttgtg
gttgcagagtttgtgggcagaatcctttacggcatcttcaccctggtgattgtgatcgtg
ctgctcaacatgctcattgcaatgatcaccaactccttccagaagattgaggatgatgct
gacgttgagtggaaatttgcccgatccaagctctatctgagttacttccgagaaggtctc
actatgcctgtccccttcaacatcatcccctcacctaaggcctttttctacctcatacgg
ggtatttttcgtcagatctgctgctgttgtactttgaactcgacaccagactatcccccc
ataacctccatgtcgaacgggaaggagatggatggtggagggtcgggggagaaccagata
ccttatcgccagcaggtgatacgagctctggtgcagcgctacatcgagtctgaacgtcgg
aagtttgaggagaccaagagaaaagatgtgggtaatcggatcacagagctaaacaaggtg
gtgggcaggctgcatgctgagatgaaggccatcatgcaggttctggtggactctggccag
gctgcaggagacatccccaacactgatggctcctccatcctggggaaatacataatggga
gccaagaacaacttcagggggttcgacaacaagctggacaacaaacacacacctctacgg
gtgactgtggagatgggacaacagggaaaagtggcggaagagaaggctggagcagtggtg
atgctaggtgacgaagggatggaggtggaacacgacagaaaggtggagataggaaaggat
ggaaggacagcaatgggactagacaaaaaagtggagatggaaaaggaggcaaaggatgga
gggatggtggtcaaacaggaagtaaaggtggatgtggggctagatggaacagaggggacg
aagcaggtaggagacatggatgttgtaaagatggaggaggggagagctgatggaagggcg
gaggaggtagtgaaggagtcagagcagaacatggaaaatggaggaaagggagaggtaaga
gtggaagaaatggtaaaggagacagagcacaagatggaaaggagaggagacagtgacggg
aagggggagaaggggataaataaggcacgcaccaatgagatggtggagaaaagggtggag
ggagaggccagtccgggtaaggcagaagtaaggatggaagtgaaagacaaagggaaaaag
gtagatagcagtgtggataatacaatcagggacaaaggagttgtaggaggtgacaaaaca
gttaatgaaatgggaggatgtgggaatgaaggtaaagtagacatgggactggaagatgtg
aaagaggtagagaggaaggtcaaagcgatggaactaaaggagaaaagagtggtggggaag
atcaacgtggcagagaggtgggataagggggaggggagggcagtggaggagaatgtgact
gagaagaaggctgccaaggctggcatggtggtggttgagaatactgccagggctggggtg
aatatcctgggggagaaggttgttccttccccgtccggcagcagcagctcacaggacact
ggcttcggctcacaggaaggggaggggtccatcaatggaggaccaatgagacccgcatat
ctgagtgcatcatctccagattag
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