Salvelinus sp. IW2-2015 (Arctic char): 111980287 Help Entry 111980287         CDS       T05762                                  Name (RefSeq) collagen alpha-2(V) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism salp  Salvelinus sp. IW2-2015 (Arctic char) Pathway salp04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:salp00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     111980287  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:salp00536]     111980287 Glycosaminoglycan binding proteins [BR:salp00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    111980287 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC TILa Motif Other DBs NCBI-GeneID:  111980287 NCBI-ProteinID:  XP_023866775 LinkDB All DBs Position LG2:complement(42284832..42345017) Genome browser AA seq 1496 aa AA seqDB search MMSFVYSRICLFLVVSVTQVFIVKCQDGNSGDDLGCTVDGQVYTNRDIWKPEPCRICVCD NGAVLCDEIQCDELSNCEKVIIPEGECCPICQSEGSTDTSGNGRPDGGRVYRGQKGEPGD VPQVTGIRGRPGPMGPPGSPGFRGDRGQKGRPGLRGSAGYDGEPGVPGNPGEPGPAGNQG PPGGLGAQMAGGFGDEKSAGQMAMMPGTRGEAGARGPPGPNGNPGHSGPQGPHGEVGDPG HMGQSGQRGPEGPPGKPGEDGEAGKAGNSGEMGFPGSAGARGFPGTPGPPGLKGHRGHTG PMGLRGETGTVGSKGALGPTGPIGTPGPMGPRGMPGERGRLGANGIPGMKGPPGNIGKPG PMGPLGINGPPGYPGIPGMKGQPGATGVRGPEGQQGQRGETGHQGRAGAIGLQGPSGTDG GPGTKGPVGTMGVQGPGGHLGPHGPPGPQGSTGQPGIKGQLGDVGVPGYKGEGGPKGEPG PPGSQGVIGPQGEEGKRGNRGDSGSLGPLGPVGERGSPGNRGFPGADGLPGPKGAQGDRG TSGISGPKGSGGDPGRTGEPGLPGARGLTGTPGVQGAEGKPGPLGPAGEDGRPGPAGSIG TRGPAGTMGTPGPKGFNGDPGKTGEQGSPGVAGQRGPPGKDGEVGPAGPAGPSGVAGDRG EQGPPGVNGFQGLPGPPGPPGESGKPGDLGIPGEGGAVGQIGPRGERGIPGERGELGPHG LAGPKGIPGAPGPDGPKGSPGPHGGIGDLGPPGLQGMPGERGISGPPGPKGDRGTGGEKG SEGTPGNDGARGLPGPLGPPGPHGPSGEKGEAGPKGPPGPHGSRAMPGNRGEPGPIGPVG FGGPPGPDGQPGVKGELGEPGQKGDAGSPGPQGLSGSHGPPGIVGVAGLKGGRGTQGAPG PTGFPGSAGRVGPPGSTGPIGEAGPLGPPGKEGPPGLRGENGSPGRQGERGPPGPAGGPG DKGDSGEDGPTGPDGPPGPAGTTGQRGIVGLPGQRGERGMLGLPGPAGPPGKQGTAGPGG DKGPSGPVGSPGANGPRGDPGPDGPAGSDGPPGKVGVIGQRGERGDHGPEGLIGTPGQPG TPGPVGATGGSGKRGDAGSRGPNGPPGSTGKRGLTGPQGPRGDKGDLGDHGDRGQKGHRG FTGLQGLPGPPGTTGEQGASGIVGPSGQRGPSGPVGPPGKEGYIGQPGPMGPPGTRGISG EIGPEGPPGEPGPTGLPGPPGPPTAAMDDLFGAMQDYDGGPLPPPEFNEDEALPNSNATQ QLDPGVQATLKALSSQIDSMKSPDGSRKHPARTCEDLKQCYPLKKSGEYWVDPNQGSSED AIKVHCNMETGETCISANPASIPRKVWWSTSRNKPVWFGADINRGQQFTYGNKDQPANSV TVQMTFIRLLSKEASQTITYHCKNTVGYKDESTGNLKKAVILKGSNDLELKAEGNSRFRY TVVEDSCGQSNGNWGKTVFEYRTQKTARLPIMDMAPVDIGGSDQEFGIDIGPVCFL NT seq 4491 nt NT seq  +upstreamnt  +downstreamnt atgatgagctttgtgtattcaaggatttgcctttttctggttgtctctgtgactcaggtt tttattgtgaaatgccaggacggaaacagtggagatgacttgggctgcacggttgacggc caggtgtacaccaaccgagacatttggaaaccggagccatgtcggatctgcgtgtgcgac aacggcgccgtcctgtgtgacgagatccagtgcgatgagctgtccaactgtgagaaagtg atcatccccgagggcgagtgctgtcccatctgtcagagcgagggcagcacagacaccagt ggcaatggcagacccgatggtggcagagtctacaggggtcagaaaggagaacctggagat gtaccacaggtgactgggatcagaggtcgtcctgggcctatggggcctcccggatctcca ggattcagaggggaccgaggccagaaaggaagacctgggctgcgtggatctgcaggatat gacggagagcctggtgtgcctggaaacccaggagaaccagggcctgcaggaaaccagggt ccaccaggaggactgggagctcagatggctggaggatttggggatgagaaatcagccggc caaatggccatgatgccaggaactaggggagaggcaggagcaagaggacctcctgggcca aatggaaaccctggccattctggaccgcaaggaccccatggggaagttggtgatccaggt cacatgggtcaatctggacaaaggggacctgaagggccaccaggaaagccgggtgaagac ggagaagcagggaaagctggaaattcaggagagatgggattccctggatcagcgggagct cgaggatttccagggacacctgggcctccgggattgaaaggccatagaggtcacacaggt ccaatgggtctaagaggagaaactggaactgtaggatccaagggagcattaggtcccact ggtccaattggcacacctggccctatgggccctagaggcatgcctggggagagaggacgc ttaggagctaatggaataccgggtatgaaaggtcctcctggcaacattggcaaaccaggt ccgatgggtccattaggtatcaatggtcccccaggatatccaggaattccaggaatgaag ggccaaccaggtgccacaggagtgcggggccccgaggggcaacagggccagaggggtgag acaggacaccaaggcagggcaggggcaattggcctacaaggtccttcaggaactgacggt ggcccaggtactaagggtccagtgggtaccatgggtgtgcagggtcccgggggtcacctc ggaccccacggtccacctggacctcagggaagcactggacagcctgggatcaaaggtcaa ctgggagatgttggtgttcctgggtacaaaggagagggcggacccaaaggagaacctggt ccccctggttcccaaggagtgattgggccccagggtgaggagggaaaaagaggaaatcgc ggtgactctggttcattaggaccactgggtcctgttggtgagagggggtctcctggtaac cgaggttttcccggtgctgatggattacctggacctaagggtgctcaaggagatcgtgga acatctggcatatctgggcctaaaggttcaggaggcgatccagggcgcactggcgaacca ggcctcccaggcgcaaggggtctgacaggtaccccaggagtccagggagccgagggcaag ccaggaccactgggcccagcaggagaagatggccgcccaggaccagcaggatctattgga accagaggtcctgcaggaaccatgggaacacctggaccaaagggctttaacggagatcca gggaaaacaggtgaacaaggatctccgggagtggcaggacaaagaggtcctcctgggaaa gatggggaggttggccctgcaggtcccgctggaccttcgggtgttgctggtgacagagga gaacagggacctcccggagtgaacggcttccagggattacctggaccaccaggcccccct ggagagtcaggaaaaccaggtgatctgggtatccccggagaaggaggtgctgtgggtcaa attggaccaaggggagaacgtggaatcccaggagagagaggagaactcggacctcacggt ttagctggacccaaaggaatccccggagcaccaggacccgatggaccaaagggtagtcct ggtcctcacggtggaattggtgacctaggacctcctggtcttcaggggatgcctggtgag agagggatctctggtcctcctgggcctaaaggtgacagaggaaccggtggagagaaggga tcagaaggtacacctggaaatgatggcgcaagaggtcttcctggtcctctcggcccaccc ggaccccatggacccagcggtgaaaagggagaagctggacctaaaggccctcccggacct catggatcaagagcgatgcctggaaaccgtggtgaacctggtcctattggtcctgttggg tttggtgggccacccggtcctgatgggcaaccaggagtcaagggggagctcggagagcca ggtcagaagggtgacgctggttctccagggcctcagggcttatctggatcccacggacct cctggtattgttggtgtggctggactgaagggcggcagaggaacccaaggtgcacctggc cccactggttttcctggatctgcaggcagggttggaccaccaggctcaactggtcccatt ggagaggccggaccccttggtcccccagggaaggagggtcctcctggccttcgtggagag aacggatcccctggaagacaaggagaaagaggccccccaggaccagccggaggcccagga gacaagggagactctggggaggacggacccacgggtcctgatgggcctccaggtcccgcc ggaacaacaggacagagaggcattgtgggtcttcctggtcagaggggagagcgtggaatg ctgggacttccaggaccagcgggtcctccagggaaacaggggactgcaggaccaggggga gacaaaggcccctctggcccggtcggttctcctggtgccaacggaccccgtggcgatcct ggtcccgatggtcctgctggatctgatgggccgccaggcaaagttggagtcattggtcaa aggggagagagaggggaccatggtccagagggactgatcgggaccccgggacaacctgga actccgggtccagttggtgccaccggtggttctggaaagagaggagacgctggttccaga ggaccaaatggtccccccggttcaacaggaaagagagggttaacgggaccacaaggaccc agaggtgataagggtgacctgggagaccacggagacagaggacagaagggacacagggga ttcaccggtttacaaggtttacccggaccaccgggtacaacaggagagcagggagcatca ggaatcgtcggaccaagtggacaaagaggaccctctggaccagttggaccaccaggaaaa gaagggtacatcggccagcctggaccaatgggacctcctggaacacgtggaattagcggc gaaatcggacctgagggacctcctggagagccaggccccactggtctccctggccctccc ggcccccccacagctgccatggatgacctgtttggcgccatgcaagactacgatggcggc ccccttccccctcccgaattcaatgaggatgaggctttgcccaacagcaatgccacccag cagctggacccaggtgtccaggccactctgaaggccctcagcagccaaatcgacagcatg aaaagtcccgacggcagcaggaagcacccggctaggacctgtgaggacttgaagcagtgc tacccactgaagaaaagcggtgaatactgggtcgatccaaaccaaggaagctcagaggat gctatcaaagtacattgtaatatggagacgggagagacttgcatctcggccaatcctgcc agcatacctcgcaaagtgtggtggagcacctcaaggaataagcctgtgtggtttggagcg gacatcaatagaggacagcaattcacctacggtaacaaagaccagccggccaactctgtc acggttcagatgacgttcattcgtctgctctccaaagaggcttctcagaccatcacctac cactgcaagaacacagtgggctacaaggacgagtcgactgggaacctgaagaaagctgtc atcctcaaggggtccaatgacctggagctcaaagcagagggaaacagccgcttcagatac accgtggtggaggacagttgtggacaatccaatggtaactggggcaagaccgtgtttgag tacaggacacagaaaacagccagacttcccatcatggatatggcccctgtggacattggt ggttcagatcaggagtttggtatcgatattggccctgtttgcttcctttaa

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