Salvelinus sp. IW2-2015 (Arctic char): 111980305
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Entry
111980305 CDS
T05762
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X1
KO
K11825
AP-2 complex subunit beta-1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04142
Lysosome biogenesis
salp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111980305
04142 Lysosome biogenesis
111980305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111980305
Membrane trafficking [BR:
salp04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
111980305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
Arm
PDS5
HEAT_EZ
Cnd3
HEAT_GCN1
HEAT_MROH2B_C
NELF-A_N
Arm_2
PIK3R4-like_middle
HEAT_spiro
API5
FANCI_S3
Motif
Other DBs
NCBI-GeneID:
111980305
NCBI-ProteinID:
XP_023866794
LinkDB
All DBs
Position
LG20:37961390..38028558
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AA seq
952 aa
AA seq
DB search
MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA
VAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDEREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNTLLKKLSPPLVTLLSGEPEVQY
VALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRK
YPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEV
VLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIQHGSI
DTGESPVSAGPAAPIEQTQSVIPSQGDLLGDLLNLDLGPPVNVPQQSSMQMGAVDLLGGG
LDSLLGGDLGGGVGGSPAVGQNFIPSSVPNTFAPSPTPAVLSSGLNDLFELSTGMAITTG
GYVTPKSIWLPAVKAKGLEISGTFSRRQGQMYMDMTFTNKALQHMTDFAIQFNKNSFGVI
PTTPLPIHTPLMPSQSIEVSLPLNTIGPVMKMDPLNNLQVAVKNNIDVFYFSGLIPLNIF
FVEDGKMERQVFLATWKDIPNENELQYQIKECHLNADTVSGKLQNDNIYTIAKRNVEGQD
MLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVTQYVYQVYDSVLKN
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgactgactcaaaatattttacaacaaataaaaaaggggagatatttgagctgaaggca
gagcttaacaatgagaagaaagagaagaggaaggaggcggtgaagaaggtcattgcggct
atgactgtgggcaaggatgtcagctccctcttcccagacgtggtgaactgcatgcagaca
gacaacctggagctgaaaaagctggtctacctgtacctgatgaactatgctaagagccag
cctgacatggccatcatggctgtcaacagctttgtcaaggactgtgaggaccctaacccc
ctgatccgggccctggccgtgcgcaccatgggctgcatccgcgtggacaagatcacagag
tacctgtgtgagccgctgaggaagtgtctaaaggacgaggacccatacgtgaggaagacg
gcagcggtgtgtgtggcaaagctccatgacatcaacgcccagatggtggaggaccagggc
ttcctggattctctcagggacctcatcgccgactccaaccccatggtggtggccaacgca
gtggcagctctgtctgagatcagtgagtcccaccccaacagcaacctgctggacctcaac
ccccagaacatcaacaagcttctgacggccctcaatgagtgcactgagtggggccagatc
ttcatcttggactgcctgtccaactacaaccccaaagacgagcgcgaggcccagagcatc
tgcgagcgtgtcactccccgtctctcccatgccaactcagcggtggtgctgtcggccgtt
aaggtgctgatgaagttcctggagcttctgcccaaggagtcggactactacaacaccctg
ctgaagaagctgtccccaccgctggtcaccctgctctctggggagccagaggtccagtat
gtggccctcaggaacatcaacctcatcgtccagaaaaggcctgagatcctgaagcaggag
atcaaggtgttctttgtcaagtacaacgaccccatctacgtcaaattggagaaactggat
atcatgattcgcctggcctcccaggccaacatagcccaggtgttggctgagctgaaggag
tacgccaccgaggtggatgttgactttgtgcgtaaggcagtgagagccatcggacgctgt
gccatcaaagtagagcaatctgccgagcgctgtgtgagcaccctgctggacctcatccag
accaaagtcaactatgtggtgcaggaggccatcgtggtcatcagggacatcttccgcaaa
taccccaacaagtatgagagcatcatcgccacgctgtgtgagaacctggactctctggac
gagccggatgctcgcgccgccatgatctggatcgtgggcgagtacgctgagaggatcgac
aacgccgacgagttgctggagagcttcctggagggcttccacgacgagagcacccaggtc
cagctcactcttctgacggccattgtcaaactattcctcaagaaaccctctgagactcag
gagctggtgcagcaggtccttagtctggccacacaggattccgacaaccctgacctacgt
gacaggggttacatctactggcgcctgctgtccaccgacccggtgactgccaaggaggtg
gtcttgtccgagaagcccctgatctcggaggagacggacctgattgagcccaccctgctg
gatgaactcatctgccacattggctccctggcctccgtctaccacaagccccccaacgcc
ttcgtggagggtagccacggcatccaccgcaagcacctgcccatccagcacggcagcatt
gatacaggcgagagcccggtgagcgcagggccagcggctcccattgaacagacccagtca
gtcatcccctcccagggtgacctgctgggagacctgctcaacctggacctgggtccccct
gtcaacgtgccccagcagtcctccatgcagatgggcgccgtcgacctgctgggcggaggc
ctcgacagcctgttggggggagacctgggaggaggtgttgggggaagtccagcagtggga
cagaactttatcccctcctcagttcccaacacattcgccccatcgcccactcctgcagtg
ctcagcagtggcctcaacgacctgtttgagctctccacaggcatggccatcaccacagga
ggctatgtcaccccaaagtctatatggctgcctgcagtgaaagctaaagggctagagatc
tcaggcacattctcccgccgacagggccaaatgtatatggacatgaccttcaccaacaag
gccctgcagcacatgaccgactttgctatccagttcaacaagaacagtttcggagtgatc
cccaccacccctctgcccatccacactccactgatgcccagccagagtatcgaagtttcc
ctgcctctcaacaccattgggccagtcatgaagatggacccactgaacaacctacaggtg
gctgtgaagaacaacattgatgttttctacttcagcgggcttatcccactcaacattttc
tttgtggaggacggtaaaatggagcgacaggtgttcctggcaacctggaaagacatcccc
aatgagaacgagctgcagtaccagatcaaggagtgccacttaaacgcagacactgtgtcg
gggaagctgcagaacgacaacatttacaccatcgccaagaggaacgtggagggccaggac
atgctctaccagtcactgaagctcaccaatggcatctggatcctggctgagctccgcatc
caacccggcaaccccaactacacgctgtccttgaagtgccgggctcctgaggtgacccag
tatgtctaccaggtgtacgactcagtcctgaagaactga
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