Salvelinus sp. IW2-2015 (Arctic char): 111980457
Help
Entry
111980457 CDS
T05762
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00061
Fatty acid biosynthesis
salp00071
Fatty acid degradation
salp01100
Metabolic pathways
salp01212
Fatty acid metabolism
salp03320
PPAR signaling pathway
salp04146
Peroxisome
salp04216
Ferroptosis
salp04920
Adipocytokine signaling pathway
Module
salp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
111980457
00071 Fatty acid degradation
111980457
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111980457
09143 Cell growth and death
04216 Ferroptosis
111980457
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
111980457
03320 PPAR signaling pathway
111980457
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
salp01004
]
111980457
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111980457
Enzymes [BR:
salp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
111980457
Lipid biosynthesis proteins [BR:
salp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
111980457
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of breast milk
111980457
Exosomal proteins of breast cancer cells
111980457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
111980457
NCBI-ProteinID:
XP_023866959
LinkDB
All DBs
Position
LG20:complement(47706441..47727144)
Genome browser
AA seq
710 aa
AA seq
DB search
MTFKVDMHYVVFLPVYLLMWLYTLITFIPWYFLTDAGKKKTMAKREKAKSTTGKAEGPYR
CVENFDNLAREDFEGKDTLDKLFEHAVQRFGNADCLGTRELLNEENEMQPSGKIFKKLIL
GEYRWLSYDEVDQIISHLGSGLAALGQQPKSTIAIFCETRAEWMITAQACFRRNFPLVTL
YATLGEEAVAYGLNECGATHLITSTELLETKLKSILPEMHNLKHVIYVDNKSIRRTGYPE
GIQIHSMQAVQELGSKPDNLSIAVQRPQPTDLAVVMYTSGSTGQPKGVMIIHSNLIAGMT
GQCERIPGLGPKDTYIGYLPLAHVLEMTAEISCMTYGCRIGYSSPQTLSDQSTKIKKGSN
GDCSVLRPTLMAAVPEIMDRIYKNVMNKVQEMSYVQRTLFKLGYNYKLEQIKMGYDAPLC
NLLLFKKVKAQLGGNIRMMLSGGAPLSSATQRFMNICFCCPVGQGYGLTETCGAGTITEV
ADYSTGRVGAPLICCEVKLRDWVEGGYTSQDQPHPRGEIMIGGPNVTMGYYKSEHLNNDF
WVDEQGQRWFCTGDVGEIHPDGCLQIVDRKKDLVKLQAGEYVSLGKVESALKNCPLIENI
CAYANSDQNYVISFVVPNQKQLTILANKNGISVAWEEICNHPAMEKEVLKAIKEVATSIK
LQRFEIPVKVRLSPEPWTPETGLVTDAFKLKRKELKNHFQTDIERMYGGK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcaaagttgacatgcattacgtagtcttcttgcctgtgtacctattgatgtgg
ctgtacactctcatcacgtttatcccatggtatttcctcactgatgctgggaagaagaaa
accatggcaaagagagagaaagccaagtccaccacaggcaaagcagagggcccctatcgt
tgtgtggagaactttgacaacctggcccgggaggactttgagggaaaggacactctagac
aagctgtttgagcatgcagtgcagcgcttcggcaacgcagactgcctgggtaccagggag
ctcctaaatgaggagaacgagatgcaaccgagtggcaagatctttaagaagctgatcctg
ggggagtacaggtggctgtcctatgacgaggtggaccagatcatcagtcatctaggtagt
ggactggcagccctgggccagcagcccaagagtaccatcgccatcttctgtgagacacgg
gcagagtggatgatcactgcacaggcctgcttcagacgcaactttccattggtcactctg
tatgccaccctgggggaggaggcagtggcctatggcctgaatgagtgtggggccactcac
ctgatcaccagcacagagctactggagactaaactcaagagtattttgccagaaatgcat
aacctgaagcacgttatctatgtggacaacaagagcatcagaaggacgggttacccagag
ggcattcagatccacagcatgcaggcagtacaagagctgggatccaaacctgacaacttg
agtatagctgtgcagcggccccagcccacagacctggctgtggtcatgtacaccagcggc
tccacaggacaacccaaaggagtcatgatcatccacagcaatcttattgctggcatgacg
ggccagtgtgagaggatcccaggcctggggccgaaggatacctacattggctacctgcct
ctagctcatgtgctggagatgactgctgagatctcatgtatgacgtacggctgcagaatt
ggctactcttccccacaaacactctctgaccagtcaacaaaaatcaagaaaggcagtaat
ggagactgctctgtgttgaggcctactctgatggcagctgttccggaaataatggaccgc
atctacaagaatgtgatgaacaaggtgcaggagatgagctatgtgcagaggacactgttc
aaactgggctacaactacaaactggagcagatcaaaatgggctacgatgcccctctctgc
aacttgctgctgtttaagaaggtgaaggctcagctgggagggaacatcaggatgatgctg
tcaggaggggcgcccttgtcctccgccacacagcgattcatgaacatctgcttctgctgc
cctgtgggacaaggctacggcctcacagagacctgcggagcaggtaccatcacagaggtg
gcagactacagcactgggagagtaggagcccccctcatctgctgtgaggtcaaactacga
gactgggttgagggcggatacaccagccaggaccagccccacccccgtggagagatcatg
attggtgggcccaacgttaccatgggttactataagagtgagcacctgaacaatgacttc
tgggtggatgagcagggccagaggtggttctgtaccggggacgtgggggagattcaccct
gatggctgtctgcagatagtggaccgtaagaaggacctggtcaaactgcaggctggagaa
tacgtgtccttggggaaagtggagtctgctctgaaaaactgcccccttattgaaaacatt
tgtgcatatgcaaacagtgaccagaactatgtgataagctttgtggtaccgaaccagaag
cagctgacaattctggccaataagaacggcatcagtgtcgcctgggaggagatctgtaac
cacccggccatggagaaagaggtcttgaaggccatcaaagaggtggctacctcaatcaaa
ctgcagcgttttgagatcccagtgaaagtgcgtctgagcccagagccctggacccctgag
actggcctggtgacggacgcattcaaactgaagaggaaggagctgaagaaccacttccag
actgatatcgagagaatgtacggagggaagtag
DBGET
integrated database retrieval system
