Salvelinus sp. IW2-2015 (Arctic char): 111980519
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Entry
111980519 CDS
T05762
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111980519
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
salp01009
]
111980519
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111980519
Protein phosphatases and associated proteins [BR:
salp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111980519
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
111980519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
111980519
NCBI-ProteinID:
XP_023867039
LinkDB
All DBs
Position
LG20:41103496..41222025
Genome browser
AA seq
2544 aa
AA seq
DB search
MSSSSGYPPTQGSFSSEQSRYPPHSVQYTFSTTRHQQEFTVPDYRGHLQDQQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSVTSQHQTDGHEALEAKRPRMETVSEAHFSHNALSGGI
VLPLQSHQVQDSLRASGGEVKKETQFSGMKAESQSPGGLHRVGEEQDSSPSKLSKEELIQ
SMDRVDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKAGDPPPIPQETNKHRSIVQIIY
DENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHAR
KQREQNICQRYDQLMEAWEKKVERMENNPRRKAKDSRTREYYERQFPEIRKQREQQERFQ
RVGQRGTGMSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDTEQRRVRFINM
NGLMDDPMKVYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVSDCVLYYYL
TKKNQNYKTLVRRNYGRRRGRNQQITRPSQEDKSDDKIEEEKLEKSEKKEDEQNKEEEEK
DEKEDSRDIGKDKDKCDGGEDEDGKDQSTPRGRKTANSQGRRKGRITTRSMANEAASVAT
EEPLPPASAPEPALPTESPQPPKAEPITQKAVREPTKTASGGAPMDPNRGALGTAAAANI
ETGETSRWTEEEMEVAKKGLVEHGRNWPAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQ
QHKQDIRRARGDRDPSQSESMASADDDENPEDSDGGENSSDTESAPSPSQADPSKAGGES
QRGDIAGGSESQRSDQDQASDRKGQDPSYGELRVKLEKSPEGEARDPDSQEDQDRERARA
AYEGQVHPKCEPQEVDMKPGGTEVQVKVEPDSAKEKGDNGEREEQREGHHSDNDSSATCS
ADEDVDAEPERQRIFSSMDKPSLLSPPGSVLMSTAKQAHLNMQQLQQRAAAIPPMVSHYS
NPHFSMIRYAHSERQAYGGRQQGESMSCLDQPTRQVGPFSTGGIPMGAPLSGFAMFQHQI
KAVHESAHAEDKQRQDQADPEHSRQPPNCPRFTTHSPTVLDREGKPFPYMPYDMKMALEQ
EAQSGRPGSPYRLSPRDMSKASPQPNDPNASRYSVPPVLQPAPNQVVQSLPDGVRVTFSR
HSRPANIPSPPPLIPTSKPTDKPSFIQGGSISQGTPGTYLPSHAVYGGPEVAKSSVGSIS
LGLPRQQDPTKPVSYIKQEECSPRGQSEGLLSQMQYEGVVRGGPMDGGISRGNPARGSIT
QGTPALSGSSIAADLLKGTITKLTTEDLSSPEKAREQLAKGHVIYEGKSGHILSYDAIKN
PREATCSPRSGHELKRSHDMMEAARGHSGREGAPFEGLIIRALPRESPHGESKERPMMTG
SIMQGTPRTSAEAYEESMKYGKQIKRESPPIRSFEGGIGKGKPYEGVNTIKEMGRSIHEI
PRQEQPGQDPRKTPDMAANSRASMEGSISQGHPLSQSAIKHNVKSLITSPSRLPHGPTMP
QLEAMERAKYEESKAAAEQQQRARHTSVVNSATSVLRSTHQEQGKSQLSPGMYQDADARR
TPVNYSTSSMSRGSPMLGRGQEGTGKPTSHDRKSAMTPNQRDSVPAKSPVSGGDPNHPMS
SHSPFDPHHRPMAPGEPRFHLPPHLDPTLFHRAVLDPAAYMFPRQPSPTGYHNTYQLYTM
ENTRQTILNDYITSQQMQVIPRPDVARGLSPREQQQIAISYPPGARGIIDLAQMPPTILL
PHPGGTGTPTMDRITYIPGAQPPFPPRPFNPASISPVCFFVSTGHQAHLAATAAAACQER
EREREREREREHREKEREKERERENREREREEYRQRERERVVAAAVANDYMRGVPGQPDR
PGSRGYLRSPSPSMRSQEAQQQRPSIFQGTNSKGVITPLMPSAAAAAQAGARYSTAADAL
AALVDAAASAPQMDVNKGKDSSKHDRDDDMSSSSSAARRQHEQQQQEADRRSMQSPYMSL
PGGKPHPGYAEGSGGPQGGKDKGPPTKSRIEEELRTRGKTTITAANFIDVIIKRQIASDK
DSRERGSQSSDSSSSLSSSRYEVPSGAAIEVISPANSPAQAQQEKQQQDDRERADRDRAA
QAATQAAGMRSFDMIRYRQSXESQQPPSSQADGGYSQSQQVPKTHRVMTLADHISHIITQ
DFARNQDPPQSSTTISSSATTTFQSAQLPVSSSGPGGRAKGHNRYSPENQTQAPSHHQRP
TPSRVSPENAPDKPRARPGKSPDRGGRGAVESYEPISPPQSYQDKQQEAREQQQQQPQRR
EADQPEMRGDSRSPGSVSYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGVGDSDVGNAQP
GTEIFNLPAVTSSSSVNPRNHSFSDPASNLGLEDIIRKALMGNLEERPEEHQGGPQPSCN
TPSNEARQEANPSPIMGKQKLQSKANSRKSKSPNPGQAYAAAAQTAGGERPSSVSSVHSE
GDYHQQAPGWAWEDRPSSTGSMQFPYNPLTMRMLSSTPPTSMASPSMQAQQPPPGGPLGS
QQQRVWEREPLLSEQYETLSDSDD
NT seq
7635 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccccctacccaggggagcttcagcagcgagcagagccgc
tacccaccacactctgtccagtacaccttcagcaccacacgtcaccaacaggagttcact
gtcccggactaccgaggtcacctgcaggaccagcagggtcggcgaaggccttccttgctt
tctgaattccaccctggaactgagaggcctccagagagacgtcatggctatgagcaacag
ttccacagtgtcacctcccagcaccagaccgatggacacgaggccctggaagccaagcgg
cctcgcatggagaccgtctctgaggcccacttttcccacaatgccctgtccggaggcatc
gttctgcccctgcagtcccaccaggtccaggacagcctcagagcctccggaggggaggtc
aagaaggagacccagttcagtggcatgaaagccgagtcccagtccccaggagggctgcac
cgtgtgggggaggagcaggacagctcgccctccaaactgtccaaggaggaactgatccag
agcatggaccgtgtggacagagaaatcgctaaagtggagcagcagatcttcaaactgaag
aagaagcagcaacaactggaggaggaagcggcgaagccagtagagccagaaaaagccggc
gaccctccccccataccacaggaaaccaacaaacaccgcagcatcgtccagatcatctat
gacgagaacaggaaaaaagctgaagaggcccataaaatatttgaaggtcttggtccaaaa
gttgaactgcccctttataaccagccatcagatactaaagtataccatgacaacataaag
actaatcaagtgatgaggaagaagctgattctgtttttcaagagaaggaaccatgctcgt
aaacaaagggaacagaacatctgccagcgctacgaccagctgatggaggcgtgggagaag
aaggtggagcggatggagaacaacccgcgtcgcaaggccaaggatagccgcaccagggag
tactacgagagacagttccccgaaatacgcaagcagagagagcagcaggagcgcttccag
agggttggtcagagaggaactggaatgtctgcgaccattgccagaagcgagcatgagatt
tctgaaatcatcgacggcctttctgaacaggagaacaacgagaagcagatgagacaactg
tccgtcatcccgcccatgatgtacgacacagagcagaggcgagtcaggttcatcaacatg
aacggcctgatggacgacccaatgaaggtgtacaaggctcggcagttcatgaatgtgtgg
accgaacacgagaaggagattttcaaggaaaagtttgttcagcacccaaaaaattttggc
ctcattgcttcctatctagagagaaagtgtgtctccgattgtgtcctgtactactacttg
accaagaagaaccagaactacaagacgctggtgagacgcaactacggaagacggcgaggg
agaaaccagcaaataacacgaccctcacaagaagacaagtcagacgacaaaatcgaagag
gagaaattggagaagtcagagaaaaaagaggacgagcagaataaggaagaggaagagaaa
gatgaaaaggaggactccagggacatcggcaaagacaaagacaagtgtgacggtggggaa
gacgaggacggaaaggaycagagcacgccgcgcggcagaaagaccgccaacagccagggc
cggcgcaagggaaggatcaccacgcgctccatggccaacgaggctgcctctgtggcgacc
gaggagccactaccgccggcctccgcccctgagcctgccctgcctacagagtctcctcag
ccccccaaagctgagcctattacacagaaggccgttagagagcccaccaaaactgcatca
ggtggagctcccatggaccctaacagaggagcactaggaactgctgccgctgcgaacatt
gaaaccggtgagacttctcgctggaccgaggaggagatggaggttgccaaaaaaggcctt
gtggagcatgggcgtaactggccagccattgccaagatggtgggcaccaagagcgaggct
cagtgcaagaacttctacttcaactacaagagacggcacaacctggacaacctgctccag
caacacaagcaggacatccggcgggcacggggtgatcgggacccgtctcagagtgagagc
atggcctcagctgacgacgatgaaaacccagaggatagtgacggtggagagaacagctca
gacacagagagcgccccgtccccgtcccaggcggacccctccaaggccggaggagagtcc
cagaggggagacattgctggagggtcagagagtcagcggtctgatcaggaccaggccagc
gatagaaagggccaggatccgtcctacggggagctgagggtcaagctggagaagagcccg
gagggagaggccagagaccctgactctcaggaggatcaggacagggagagggcccgggcg
gcctacgagggccaggtacaccccaagtgtgagccccaggaggtggacatgaagcccggg
ggtactgaggtacaggtgaaggtggagcctgactcggctaaggagaagggggacaatggg
gagagagaggagcagagagaggggcaccactcagacaatgactccagcgccacctgcagt
gcagatgaggatgtggacgctgagcccgagagacagaggattttctctagtatggacaag
ccttcgctgctcagccctcccggctcagtgctgatgtccacggccaagcaggcccacctc
aacatgcagcagctccagcagcgcgccgctgccatcccgcccatggtcagtcactatagc
aacccacacttttctatgatcagatatgcccattcggagaggcaggcatacggaggcagg
caacagggtgaaagcatgtcttgtttagaccaacctacccgtcaagtgggtcctttcagc
actggcgggatacccatgggagcccccctcagtggctttgccatgttccagcaccagatc
aaggcagtgcacgagtcggcccacgcggaggataaacagagacaggaccaggccgacccc
gagcacagcagacaacctcccaactgcccacgcttcactacccacagccccactgtactg
gacagggagggtaagcccttcccctacatgccttatgatatgaagatggctctggagcag
gaggcccagtctggtcggccaggatctccctacaggctctctcccagggacatgagcaag
gcctctcctcagcccaacgaccccaacgcctcccgctacagcgtgcctccagtgctccag
ccagctcccaaccaggtggtccagagtctgcctgatggagtccgtgtgacgttctccaga
cacagccgacccgccaacattccatctcctcctccactcattccaacctccaaacccaca
gacaagccttcctttatccagggcggctccatctcccagggaacgcctggtacgtacctg
ccatcccatgctgtctacggtggcccagaggttgcaaagagctcagtgggctccatatcc
ctgggcctgcccaggcagcaggaccccaccaaacctgtgtcctacattaagcaggaggag
tgttctccgcgtggccagtcggagggcctcctctcccagatgcagtatgagggggtagtc
agaggaggcccaatggatgggggtatcagcagaggcaacccagccagaggatcaatcaca
cagggcacgccagccctgtctgggtccagcattgcggctgacctgctgaagggraccatc
accaagctgaccacggaggacctgagcagcccagagaaggcccgggaacagctggccaag
ggacacgtkatctacgagggcaagagtggacacatcctatcctacgatgcrattaagaac
ccaagagaggccacgtgtagccccaggtcaggccatgagctcaaacgctcccacgatatg
atggaggctgccagaggccactccgggagagaaggagcccccttcgaggggttgataatc
cgagccctgcccagagaaagtccccatggggagtctaaggagaggcccatgatgactgga
tccatcatgcaaggtacacccagaacctctgcagaggcctatgaggagagcatgaagtac
ggcaagcagataaagagggagagcccacccatccgctcatttgagggggggataggtaag
ggtaagccctacgagggggtgaacaccattaaggagatgggtcgctccatccatgagatc
ccccgtcaagagcaacctggacaggacccccgcaagacccccgacatggctgccaacagc
cgagccagcatggagggctccatatcccagggccatcctctgagccagtcggccatcaag
cacaacgtcaagtccctgatcaccagtcccagtaggctgccccacggccccaccatgccc
cagctggaggccatggagcgggccaagtatgaggagagcaaggcggcggcggagcagcag
cagcgggcgcgccacacctctgtggtcaactcggccacctccgtgctgcgctccacccac
caggagcaaggcaagtcccagctcagccctggcatgtaccaagacgcagatgcccgcagg
accccggtcaactacagcaccagctccatgtccagaggctcgcccatgctgggccgagga
caggagggtactgggaagcctacgtctcacgataggaagagtgccatgacccccaatcag
agggacagtgttccagctaagtcccctgtgtcagggggtgaccccaaccaccctatgtcc
tcccacagcccctttgacccccaccaccgccccatggcccccggagaacctcgcttccac
ctgcctccacacctagaccctaccctcttccaccgggccgtcctggaccctgctgcatac
atgttcccgaggcagccgtccccgacgggctaccacaacacctaccagctgtacaccatg
gagaacacaaggcagaccattctcaacgattatatcacctcacagcagatgcaggttata
ccacggcccgacgttgccaggggcctgtcgccacgggaacagcaacagattgccatctct
tatcctcccggagcgcgagggattattgatctagcccagatgcctccaactatcctgttg
cctcaccctgggggaacaggtactcccactatggaccgcatcacctacatccccggagct
caaccccctttccctcctaggcctttcaacccagcctccatatctccagtctgtttcttt
gtgtccacaggccaccaagcccacctcgcagctacagcagcggcggcctgtcaggagcga
gaacgagagagggagcgcgaaagagaaagggagcatcgagagaaagagagggaaaaggag
cgagaaagggagaacagggagagggaaagggaggagtacagacaacgagagcgtgagcga
gtggtggctgcagcggttgccaatgactacatgcgtggagttccagggcagccagataga
ccaggaagccgtggttacctgcgtagcccctccccatctatgaggtcacaggaagcccag
cagcagcgacccagcatcttccaaggaaccaacagcaagggcgtcatcacccctctcatg
ccatcagcagcagcagcagcccaggcaggagcccgttatagcactgcagccgacgccctg
gctgccctggtggacgctgccgcatccgcccctcagatggacgtcaacaagggcaaggac
tcctccaagcacgatcgagacgacgacatgtcttcatcatcctctgcggccaggcggcag
cacgagcagcagcagcaggaggcagacaggcgctccatgcagtctccctacatgtctctg
ccaggggggaaaccccacccaggatacgctgaggggtctggtggtccccaggggggcaag
gacaagggtccccccaccaagtcacgcatcgaggaggagctgaggaccagaggaaagacc
accatcacggccgccaacttcatcgacgtcatcatcaagcgtcagatcgcctcggacaag
gactcacgggagagaggctcccagagctccgattcctccagcagcttgtcatccagtcgg
tatgaggtccccagtggagcagccatcgaggtgatcagcccagccaactctccagcccag
gcccagcaggagaaacagcagcaggatgacagggagagggctgacagggacagggccgca
caggcagcaacacaagcagctggcatgcgttcctttgacatgatccgctaccgccagtca
grggagtcccagcagcccccctcctcccaggctgacggagggtactcccagtcccagcag
gtccccaagacccaccgggtcatgaccctggctgaccacatctcgcatattatcacccag
gactttgccaggaaccaggatcctcctcagtcctccaccaccatctcctcctctgccacc
accacattccagagcgcccagctgccagtatctagctcgggacccgggggccgtgccaag
ggccacaaccggtacagcccagaaaaccagacccaggccccatcacaccatcagagaccc
acacccagcagagtgtctcctgagaatgcccctgacaagcccagagccagacctggtaaa
tcccctgatcggggtggcaggggggcagtggagagttatgagcccatctcccctccccag
agctaccaggataaacaacaggaggccagagagcagcagcagcaacaaccccagagacga
gaggctgaccagcctgagatgaggggcgactctcgctcccctggcagtgtcagctacctg
ccctccttcttcaccaagctggagaacacctcccctatggtgaaatccaagaagcaggag
atatttcgtaagttaaactcctctggtgtcggggattctgatgtaggaaatgcacaacca
ggcacagagatcttcaacttgcccgctgtgaccagctcaagcagcgtgaaccccaggaac
cactccttcagcgacccggccagtaacctgggcctggaggacatcatccggaaggccctg
atgggcaacctggaagaaaggccagaggagcaccagggagggcctcagcccagctgtaac
acccctagcaacgaggcccgccaggaggccaacccctcacctatcatgggtaagcagaaa
ctgcagagcaaagccaacagccggaagtccaagtcgcccaacccaggtcaggcatacgca
gcagcagcccagacagcaggaggggagcggccctcgtcagtctcctccgtccactcagag
ggagactaccaccagcaggccccgggctgggcctgggaggaccggccctcgtccacaggc
tctatgcagttcccctataaccccctgaccatgcgcatgctgagcagcacgccccccacc
tccatggcctccccctccatgcaggcccagcagcccccaccaggaggccctctggggtcc
cagcagcagcgtgtgtgggagcgggagcccctactgtcggagcagtatgagaccttgtca
gacagcgatgactga
DBGET
integrated database retrieval system
