KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111980590
Entry
111980590         CDS       T05762                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111980590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:salp03041]
    111980590
Spliceosome [BR:salp03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111980590
 Complex B
    111980590
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer
Other DBs
NCBI-GeneID: 111980590
NCBI-ProteinID: XP_023867171
LinkDB
Position
LG20:77904988..77911145
AA seq 468 aa
MADFEEFEKQLSENRQEREKERRKKXSGSGXQSXSEKHRSWSKDRGNRSREKRSRSRDRK
SREQRSTSRDHKKHSYSPRRTRRKRTCRYWDVPPPGFEHITPLQYKAMQAAGQXPXIALX
ASSXTSGLAVTPTQVPJVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQAP
SIPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQP
AFHVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGY
AFCEYVDISATDQAVAGLNGMQLGDKKLIVQRASVGAKNXNPSAIIETPVTLQVPGLQGL
QNSGLPTEVLCLLNMVMPEELVDDEDYEEILEDISEECCKYGSVRSMEIPRPVDGVEVPG
CGKIFVEYVSAVDCQKAMQALTGRKFANRVVVTKYYDPDMYHRQEFSG
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggctgattttgaggaattcgaaaaacagctgagcgagaaccgacaggagagagagaag
gagagacgcaagaagaygagcggcagtgggtrtcagagccycagtgagaaacatcgcagc
tggagcaaagaccgtggcaaccggagccgagagaagcgaagccgcagtagagacaggaag
agccgggagcagaggagcacctcgcgggatcacaagaagcacagctattctccacgaaga
acaaggaggaaaaggacctgcagatactgggatgtgcctccccctggctttgaacacatc
acaccattgcagtacaaagctatgcaagcggctgggcagatkcccakaatagccctgrtg
gcatcatctgkcacgagtgggttggcagtaacacccacccaagtgcccwtagttggcagt
cagatgactaggcaggctcgacgtctctatgttggcaatattccctttggtgtgacagag
gagtccatggcagaattcttcaatgcccaaatgaggcttgcaggcctatcgcaagcccct
agcatccctgtgcttgctgtgcagataaatcaggataaaaactttgcattcctagagttc
cggtctgtcgatgagaccacacaggccatggctttcgatggaataattttccaaggtcaa
tcgttgaagataagacgaccacatgactaccggcccctacctggcatttcagagcaacct
gcttttcatgtcccaggtgtcgtgtccacagtggtaccagactccccacataaactgttt
attggaggcctacccaactatctcaatgatgatcaggtgaaggagctcttgacatcattc
ggaccactcaaagctttcaaccttgtcaaggacagtgccacgtcactatccaaaggttat
gccttttgtgaatatgttgacatcagtgcgactgatcaggcggtggctgggctcaatggc
atgcaactgggtgacaaaaagctcatcgtccagagagcaagtgtgggggccaaaaacycc
aatccgtctgccatcatcgagaccccggtgacgctgcaggtgcctgggctgcagggactt
cagaactctgggctgcccacggaggtgctgtgcctgctcaacatggtgatgcctgaggag
ctggtggatgacgaggactacgaggagatcctggaggacatcagtgaggagtgctgcaag
tacggcagcgtgcgctccatggagattccccggcctgtcgatggagtggaggtccctggc
tgtggcaagatctttgtggagtacgtttctgctgtagactgtcagaaagccatgcaggcc
ctcactggccgcaagtttgccaacagagtggtggtcaccaaatactatgatccagacatg
tatcacagacaggagttctcagggtag

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