Salvelinus sp. IW2-2015 (Arctic char): 111980697
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Entry
111980697 CDS
T05762
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111980697
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111980697
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
111980697
NCBI-ProteinID:
XP_023867341
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Position
LG20:31965327..31995003
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AA seq
916 aa
AA seq
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MRLTTAQLEHHALVTFTFWVACCRLGSAMKGGGRGKEPPVEVEVSGKRPKRKCLQWHPLL
SKKALDFSEEEEEEDEEELEKPLLVRESRGPEVACGGPMEVEGDSSEQRARRPMNAFLLF
CKRHRSLVRQEHPRLDNRGATKILADWWAVLEPKEKQKYTDMAKEYKDAFMKANPGYKWC
PTTNKPVKSPCHTVSNARKKVWSFPSNSPKGCATAKKVPKTDSTPQLNFAMADPTKMGGL
SMLLLAGEHALTAREISSSSSKSGATDVTKHPENSSLFQLAEISSSTLQPSLTDTADEGK
PLSRGDQAETWSGTSQQGKSDVPKDKSPLFQLAEQISSDSSQSTAPEGKQCSQSALFQLA
EMCLASEAGKMETQDDTCAPHIKTETVVKEDTGGNITDFPRSSPPSSSSSTPTNASPPLL
SGQPASVKKKKKKKEATAREPPKAVDKDKIPRPGSPKKTLKKRPSSESELESLLYTIEAV
AKGAWGDAEEDIPKKKASTAVVTIPREPSSPKKKSKAKRPLKAKEDDEMEEDGRRTELPS
IVETAANLASPKTEAEEASIGSTPDPLGSTEKPNAPPSPPHIKHKVEEKQREAEANAEGC
GSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRGSFRSGSDEGGWTDETWAFSQMGPT
NPKKLKKSKSKDETAPGLGKLEEEFEKKFNSLPQYSPLTFDKKSTTVTKKKKTDVSTAPE
EQPPKPAKGPSSSQKKTLFHKIVSKYKQKKEKPNTVDKDIAMHSDSPMSDSAAKAKQTPA
PCATATPSTEAMGTSASMPVGSQKRKARKSKITHLVRSADGRVSPAEEDKVRDLTPEQDD
KPLPRETLCNETECYSAPKQEEADRSSAPEVLPAFFSLSALAEVAAMENIHRGQRVIGDS
QKEMAQTPVLISCADQ
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgacaacggctcagttggagcaccacgctttagttacctttacattctgggtg
gcctgttgcaggcttggcagcgccatgaaaggtggaggaaggggtaaggagcctcctgtg
gaggtggaggtgagcggcaagcggcccaagcgcaagtgtctacaatggcacccgctactc
tccaagaaggccctggacttctcggaggaggaagaggaggaggacgaagaagaactggag
aagccattgctggtcagggagagccgggggccggaggtggcatgcggggggcccatggag
gtggagggggactcttcagagcagcgggcccgccggcccatgaacgccttcctgcttttt
tgcaagcgccaccgttcactggtgaggcaggagcaccctcggctggacaaccgcggtgcc
accaagatcctggctgactggtgggctgtgttggagcccaaagagaaacagaagtacacg
gacatggccaaggagtacaaggatgccttcatgaaggctaacccaggctacaagtggtgc
cccaccaccaacaagccagtcaagagcccctgccacactgtcagcaacgcacgcaaaaaa
gtgtggtccttcccttccaactctcctaagggttgtgccactgccaagaaagtgcccaag
actgacagcacaccacagcttaatttcgccatggcagatcccacaaagatgggtggtcta
agcatgctactgttggctggggagcatgcccttactgccagagagatttcctccagttct
tcaaagtctggagccacagatgtcacaaagcaccctgagaactcctccctattccaactt
gctgagatctcctctagcacgcttcagcccagtttaacggacacagctgacgaggggaag
cccttgagtcggggggaccaggcagaaacgtggtctggcacctcacagcagggaaagtct
gacgtacccaaggacaagtcccctctttttcaactggcagagcagatctcctctgattca
agccagtcgactgcaccggagggaaagcagtgtagccagtcggctctcttccagctcgct
gagatgtgtttggcctccgaggcagggaagatggagacacaggacgatacctgtgcccca
cacatcaaaactgagacggtggtcaaggaggacactgggggcaacatcaccgattttcct
cgttcctctcccccgtcttcttcctcctccacgcccaccaacgccagtcccccgctgctc
agcggccaaccagccagcgtcaaaaagaagaagaagaagaaagaagctactgccagagag
ccacccaaagcggtggacaaagacaagatccctcgtccgggctcgcccaaaaagaccctc
aaaaagcgaccatcgtctgagtctgagttggagagcctcctctacactatcgaggccgtg
gctaaaggggcctggggcgacgcagaggaggatatacccaagaagaaggctagcaccgcc
gtcgttaccattccgagagagcccagctcacccaaaaagaagtccaaagccaagaggccc
ctgaaggctaaggaagatgatgagatggaggaggatggaaggcgcacagagctgccatcg
atagtggagacggcagcgaatctagcaagccccaagacagaggctgaggaggccagcatc
ggcagcaccccggaccccctgggcagcacggagaagcccaacgcccctcccagccccccg
cacatcaagcacaaagtcgaggagaagcagagggaagccgaggccaacgctgaagggtgt
ggctccaggaagtctgagagaagctgcaagggggcgctgtacaagaccctggtgtcggaa
gggatgctgacctcactgagggccaacgtggacagaggcaaaagaggctcttttcgaagt
ggatctgatgaagggggctggactgacgagacctgggctttctcacagatgggacccact
aatcccaagaagctaaagaagtcaaaatccaaagacgagacggcgccaggtttggggaaa
ctggaggaggagtttgagaagaagttcaacagcctgccgcagtacagccctctgacgttc
gacaagaaaagcaccaccgtcaccaagaagaaaaaaacagacgttagcaccgcaccggag
gaacaacccccaaaacctgccaagggtccatcttcatctcagaaaaagactttattccac
aagattgttagcaagtacaagcagaaaaaggagaaacccaatactgtggacaaagacata
gcgatgcatagtgactcccccatgtcagactcggctgccaaggccaagcagacccccgcc
ccatgtgccaccgccacgccttccacagaggccatgggaactagcgctagcatgccggtg
ggcagccagaagaggaaggctaggaagagcaaaataacccacctggtgcgctcggccgac
ggcagggtgtccccagcagaggaggacaaagtcagggacctgaccccggagcaggacgac
aagccattaccccgagagactttatgcaacgaaacagagtgctacagtgcacccaagcag
gaggaagcagatagaagcagtgcacccgaagtcctgcccgccttctttagcctgtctgcc
cttgccgaggtggcagccatggagaatattcacagaggccagcgtgtgattggcgacagc
cagaaggaaatggcccagacccctgtcctcatctcctgcgctgaccaatga
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