Salvelinus sp. IW2-2015 (Arctic char): 111980734
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Entry
111980734 CDS
T05762
Name
(RefSeq) cell adhesion molecule 1 isoform X1
KO
K06781
cell adhesion molecule 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111980734
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111980734
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
Nectin family
111980734
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
Ig_5
C1-set
C2-set_3
Adhes-Ig_like
Syndecan
Motif
Other DBs
NCBI-GeneID:
111980734
NCBI-ProteinID:
XP_023867431
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Position
LG20:complement(34968586..35400810)
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AA seq
441 aa
AA seq
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MAITGNGSLATLLFLFMIPAALHKGAAQYPVQSQNLVTDNVAVVEGDVAVISCRVKNNDD
SVIQLLNPNRQTIYFRDVRPLKDARFQLVNFSDNELRVSLSNVTLSDEGRYVCQLYTDPP
QEAYADITVLIPPGNPIIESREGQVIEGNETEMTCTAMGSKPAATIRWMKGDKELQGKSK
VEETYDTMFTVTSQLTFTVTKEDDGVPVVCIVDHPAVKDVQAQTYLVVHYKPEVKIVVEF
PDGLPREGQNMELSCQAKGKPHPQQINWVKVDDDLPSHALITGPDLYIENLNKTYNGTYR
CFAANSVGESYDDYILYVYDAPTTTPIPTTATTTTPTTTTISLPEATADTTPSTEPAAHD
SRAGEGAPRAVDHAVIGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADAD
TAIINAEGGHNNSDEKKEYYI
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcacaggcaacggatctctcgctactcttctctttttgttcatgattccagca
gctcttcataaaggagctgctcagtacccagtccagagtcagaacctggtgacggacaat
gtggcggtggtggagggagacgtggccgtcatcagctgcagggtgaagaacaacgacgac
tcggtcatccagctcctcaaccccaacagacagaccatctatttcagagacgtccgaccc
ctgaaagatgcccgcttccagctggtgaacttctcggacaatgagctgcgggtgtctctg
tccaacgtgaccctgtctgacgaggggagatacgtgtgccagctgtacacagaccctcca
caggaggcctatgctgacatcactgtgctgatccctccaggcaacccaatcatcgagtcc
cgggaggggcaggtaatcgagggcaatgagacagagatgacctgcaccgccatgggcagc
aagcccgccgccaccatcagatggatgaagggagacaaagagctccaaggtaagtcgaag
gtagaggagacgtacgacaccatgttcaccgtgaccagccagctgacgttcaccgtcacc
aaggaggacgacggtgtgcccgtggtgtgcatcgtggaccacccagccgtcaaagatgtc
caggcccagacgtaccttgtggtacattataaaccagaggtgaagattgtagtggagttt
cctgacgggctgccaagggaaggacagaacatggagctgtcatgccaggccaaaggcaaa
ccgcatccccagcagatcaactgggtgaaggtggacgacgatctgccctcacacgccctc
atcaccggcccggacctgtacatcgagaacctcaacaagacctacaacggcacctaccgc
tgcttcgctgccaactcagtgggcgagtcgtatgacgactacatcctctatgtctatgat
gccccaaccactacccctatacccactacagctactaccaccactcccaccaccacaacc
atctccctccctgaagccactgcagacactacgcccagcactgaacccgcagcacacgat
tccagagctggagagggagcaccgagagcggtcgaccatgcagtcattggaggagtggtg
gctgtggttgtctttgccatgctctgtctactcatcattttgggacggtactttgcaaga
cacaaaggtacctacttcacgcatgaagctaaaggagccgacgatgcagcagatgcagac
acggccattatcaacgcagaggggggccacaacaactcggacgagaagaaggagtactac
atatag
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