Salvelinus sp. IW2-2015 (Arctic char): 111980767
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Entry
111980767 CDS
T05762
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-1-like isoform X1
KO
K04862
voltage-dependent calcium channel beta-1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04260
Cardiac muscle contraction
salp04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111980767
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
111980767
04261 Adrenergic signaling in cardiomyocytes
111980767
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111980767
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111980767
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
111980767
NCBI-ProteinID:
XP_023867505
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Position
LG20:complement(71487757..71518804)
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AA seq
633 aa
AA seq
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MEQTDRYRRPGMGSADSYTSRPSDSDVSLEEDPEALRKEADLQALATLEKAKTKPVAFAV
RTNVGYNSGPNDDVPVQGMAISFEAKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKL
ENTRLLQEQKMRQNRLSSSKSGGSSSLDVATGTRRSTPPGTAHVDMSTMAFDLDPLDLDA
EEPPEPQGDPRSPKGSAGSVTSPQGQIHRLPFFKKMEHVPPYDVVPSMRPIILVGPSLKG
YEVTDMMQKALFDFLKHKFEGRISITRVTADISLAKRSVLNNPSKHAIIERSSTRSSLDV
LAEVQSEIERIFELARTLQLVALDADTINHPSQLAKTSLAPIIVYIKIASPKVLQRLIKS
RGKSQAKHLNVQMVAADKLAQCPPELFDIILDENQLEDACEHLADYLEAYWKATHPPSSN
PPNPLLNRTMATAALAASPEPVSNLQGPYLVHGEQKREGPLSECGGSGSLHDYQSDQGGK
QQQQQHQQQKQQTYLHSSRGQLRGGGGRGLSRQDTFDSETQGSRDSAYTEAGDSCMDIET
DPYEESEMYRGVGGGGSRLHLAQHHGRQASWEDEGAEPDQENLNHPPIPSHTQPGQHSRA
KLRERYCQEPGDTGANMGRNKNQEDWGRDVYIR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggaacagactgacaggtatcgcaggcccggcatgggctctgccgactcctacaccagc
cggccgtcggactcagatgtgtccctggaggaggacccagaggcactgaggaaggaggca
gacctacaggccctggccaccctcgagaaagctaagaccaaaccagtggcctttgccgtg
cggacgaatgtgggctacaactctgggcccaacgacgacgtcccagtgcagggcatggcc
atctcctttgaagccaaagacttcctacacatcaaagagaagtacaataatgactggtgg
attgggcgtctggtgaaggagggctgtgaggtggggttcatccccagcccagtcaaactg
gagaacacccggctactgcaggagcagaagatgagacagaaccgcctcagctctagtaaa
tctggtggcagctccagcctggacgttgccacgggaacacgcaggtccacccctcctggc
acagctcatgtggacatgtccacgatggcttttgaccttgaccccctggacctggatgct
gaggagccccctgagccccagggtgaccctcgctcccccaagggcagcgcaggcagcgtc
acctccccccagggccaaatccaccgcctgcccttctttaagaagatggagcatgtcccc
ccttacgacgtggtcccctccatgagacccatcattctagtggggccgtcactgaagggc
tacgaggtgactgacatgatgcaaaaggctctctttgactttctcaagcacaagtttgag
ggcaggatatccatcacccgggtgaccgcagacatctcccttgccaagcgctcggtcctc
aacaaccccagtaaacacgccatcatcgagcgctccagcacgcgctccagcctggacgtg
ctggcggaggtgcagagtgaaattgagcgtatctttgagctggcccgcaccctgcagctg
gttgcsctagacgcagacaccattaaccacccctctcagctggctaagacctccctggct
cctatcatcgtctacatcaaaatagcctcaccgaaggtcctccagaggctcattaaatcc
cgggggaagtcccaggccaaacacctgaacgtgcagatggtggcagcagacaagctggcc
cagtgcccccctgagctgtttgacatcatcctggatgagaaccagctggaggacgcctgt
gagcatctggctgactacctggaggcctactggaaggccacscacccccccagcagtaac
ccccccaaccccctcctcaaccgcaccatggccacggccgccctggccgcctccccagag
cccgtctccaacctgcaggggccatacctggtgcacggagaacagaagcgggaagggcct
ctttcggagtgcggtggcagcggcagtctccatgactaccagagtgaccagggagggaag
cagcaacagcagcagcaccagcagcagaagcagcagacctacctgcactcgtcacggggc
cagctacggggagggggtgggaggggcctgtcccggcaggacacctttgactcggagacg
cagggcagtcgggactcggcctacactgaagcaggggactcttgcatggacattgagacc
gacccctacgaggagtctgagatgtaccgcggggtagggggcgggggcagccgcctccac
ctggcccagcaccacggccgccaggcctcctgggaagacgagggggccgagccggaccaa
gagaacctcaaccaccctcccataccctcccacacccagcctgggcaacacagccgggcc
aagctaagggagaggtactgccaggaacccggggacaccggcgccaacatgggccgcaac
aagaaccaggaggactgggggagggacgtgtacatccgttaa
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