Salvelinus sp. IW2-2015 (Arctic char): 111980812
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Entry
111980812 CDS
T05762
Name
(RefSeq) rab GTPase-binding effector protein 1 isoform X1
KO
K12480
Rab GTPase-binding effector protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111980812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111980812
Membrane trafficking [BR:
salp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
111980812
Protein recycling
Rab4 associated proteins
111980812
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rabaptin
Rab5-bind
ACBP4_C
Fez1
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
111980812
NCBI-ProteinID:
XP_023867579
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Position
LG20:complement(37668847..37699282)
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AA seq
856 aa
AA seq
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MAEQATESARQPQHDVVLQQRMAALEQERAEFSKLKQQLESEFNQKRAKFKELYMSKEEE
LKSQAASLEGAQSELSRVQAQLEQAQADMENIKAVATVSESTKQEAVDQVKRQWQEEVAS
LQAIMKDTVREYEVQFHQRLEQERAQWNQYREAVEREMGELRHRLSEGGQEEENLENDMK
KAQEDAEKLRSVVMPMEQEIAALKAKLTMAEDRVKELEASKVKELNHVLEAEKSCRTDLE
MYVAVLNTQKSVLQEDAEKLRKELHEVCHLLELERQQHNQLKHTWQRANDQFLESQRLLM
RDMQRIENVLSSEQLRQVEEIKKKDQEEDDNERIIQAKEQNEEDGTETEPLEDSFLGLSI
EEHHSAHGSMYSLDTDLVAGDPYKDCLRRVQSTDSLGSSPGLQGLGGHNHKAKSASHLDE
SDFGPLVGADCGASEGLAGFGDTLSVSSIQLTAGHFLLTKDQEKAIKAMTPEQEETASLM
SSISHAPDTAFLSPSGYRLVSDQEWNLLQQEVKNAGRKLGRRCDMCSNYEKQLQVIQGQE
AETRDQVKKLQVMLRQANDQLERTLSEKQELEDSVKQGNEETTAKVAALMQRVHESELLL
NTLQEAFSQAKRNTQEQMAVLMQSREQVADELSRLQRDNDSLTGKHRLHLSLQQQEDFKL
PTTVQELQPLVLQLREDIVAVRTAADHLEEKLKAEILFLKEQLQAEQCFKENLEDTLQME
IEGCKEEKDILEASFSSLKTELERVKDEKEQLESSLAEKSKTLESVQGLKSSLEEQLREL
TTTKTALEAQALDEKDKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQTDSLDRIRA
ILNNTNLTDISQLPET
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacaggccacggaatccgcccggcagccccagcacgacgtggtgctccagcag
cgaatggcagccctggagcaggagagagcagagttctccaagctcaaacaacaactggag
tctgagttcaaccagaaacgggccaagttcaaagagctctacatgtccaaagaagaggag
ctgaagagccaggcagcgtctctggagggggcccagtcggagctgagtcgtgtccaggcc
cagctggaacaggcccaggcagacatggagaacatcaaggcagtggccactgtgtcagag
agcaccaagcaggaggccgttgaccaggtcaagagacagtggcaggaggaggtggcctcc
ctacaggccatcatgaaagacacagtgcgtgagtacgaggtgcagttccaccagcgcctg
gagcaggagcgtgctcaatggaaccagtacagggaggcagtggagagggagatgggcgag
ctgagacaccgcctctcagagggtggccaggaggaagagaacttggagaacgacatgaaa
aaggctcaggaagatgcagagaagctgcggtcggtggtgatgcccatggagcaggagata
gcagctctgaaagccaagctgacaatggcagaggacagggtaaaggagctggaagcctca
aaggtaaaggagctcaatcatgtcctggaagcagagaaatcttgccgcacagacctggag
atgtacgtggcggtgctcaacactcagaagtctgtccttcaggaggatgcagagaaacta
cgtaaagagctccatgaagtttgtcacctgctggagctggagcggcagcagcacaaccag
ctgaagcacacgtggcagcgggccaacgaccagttcctggagtcccagaggctgctgatg
agggacatgcagaggatcgagaacgtgctctcctccgagcagctccgccaggtggaggag
atcaagaagaaagaccaggaggaggatgataatgaaaggatcatccaggctaaggagcaa
aacgaggaggacgggacagaaaccgaacctttagaagactcatttcttgggctcagtatt
gaagagcaccacagtgcccacggctccatgtactccttagacacagacctggtggcaggg
gacccctacaaagactgcctgcggagggtccagtccacagacagcctgggttcctctccc
ggtctccagggcctggggggccacaaccataaggctaagtcggccagccacctggacgag
tccgactttgggcccctggtgggggcggactgcggtgcctctgagggcctggcgggcttt
ggggacacactatcggtcagctccatccagctgacggccggccacttcctcctcaccaag
gaccaggagaaggccatcaaggccatgacaccggagcaggaggagacggcctcgctgatg
tccagcatttctcatgcccccgacaccgccttcctttccccatcaggctaccggttggtc
agtgaccaggagtggaacctgctacagcaagaggtgaagaacgcagggaggaagttgggt
cggcggtgtgacatgtgctccaactacgagaaacagctgcaagtcatccagggccaggag
gcagagacacgcgatcaggtaaagaagctccaggtgatgctgcggcaggccaacgaccag
ctggagagaaccctgagtgaaaaacaggagctggaggactctgtgaaacagggaaacgag
gaaaccactgccaaggtcgctgctctcatgcagagagtccacgagtcggagttgctgctc
aacacactacaggaggccttcagtcaggccaagaggaacacacaggaacagatggcagtg
ctgatgcagtctagggagcaggtggcagacgaactgagcagactgcagagggacaacgac
agcctaacaggcaaacaccgactccacttatctctccagcagcaggaggacttcaaacta
cccaccacggtgcaagaactacaaccactggtgctgcaattgcgggaggacatagttgcg
gtacgcacggctgcagaccacttagaagagaagctgaaggcggagatcctgttcctgaag
gagcagctccaggcagagcagtgcttcaaagagaacctggaggacacactacagatggag
atagagggctgcaaggaggagaaagacatcttggaagcgtcattctcgagtctgaaaacc
gagctggagcgcgtgaaagatgagaaagaacagctggagagcagcttggcagagaagagc
aagacattagagagtgtccagggtctgaagagcagtctggaggagcagctcagagagctc
accacaaccaagactgccctggaggctcaggcgttggatgagaaggacaaagcacagcgc
ttgcagacggagctggacgtcagtgagcaggtgcagagagactttgtcaagctctcccag
accctccaggtccagttggagcggatcagacagactgactctctcgaccgtatccgagcc
atcctcaacaacaccaatttaactgacatcagccagctcccagagacatga
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