Salvelinus sp. IW2-2015 (Arctic char): 111980871
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Entry
111980871 CDS
T05762
Name
(RefSeq) UV excision repair protein RAD23 homolog A isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03420
Nucleotide excision repair
salp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111980871
09124 Replication and repair
03420 Nucleotide excision repair
111980871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
salp03051
]
111980871
03400 DNA repair and recombination proteins [BR:
salp03400
]
111980871
Proteasome [BR:
salp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111980871
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
111980871
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
OTU1_UBXL
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
111980871
NCBI-ProteinID:
XP_023867682
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Position
LG20:75768068..75776361
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AA seq
354 aa
AA seq
DB search
MQITLKTLQQQTIQIDIDPDQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKAKSATAASTPSSEAPKAPVQDSGSSSSAGPALAAIPIPSEEPTP
TVAEPPAPASSDPSLEVQGGDASSALVTGAEYETMLTEIMSMGYERERVVAALRASFNNP
HRAVEYLLTGIPSSPVQETNPPAQLPASARTGTETPTVAEGENPLEFLRSQPQFQSMRQV
IQQNPSLLPALLQQLGRENPQLLQQISQYQELFIQMLNEPAGEVGDVPEVGDLGAGVEGA
PVNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFLLNQGFEDE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcacgttaaaaacactgcaacagcagaccattcaaattgacatagacccagat
caaacggtgaaggcactgaaggagaagatagaagcagagaggggaaaagataacttccca
gtgtctggacagaagctcatatatgctggcaaaatcctgcaagatgacacgcctattaaa
gactacaaaattgatgagaagaattttgttgtagttatggtatctaaggcaaagtctgcc
acagctgcttcaacaccttcctcagaggcacccaaggcccctgtccaggactctgggtcc
tcgtcgtctgccggcccggcccttgcagccatccctatcccctcagaggagcccacacct
acagtcgcagagcccccagctccagccagctcagaccccagtctggaggttcagggggga
gatgcctcctctgccttggtgacaggagcggagtatgagaccatgctgacagagatcatg
tctatgggttatgagagggagagagtggtagctgctctccgggccagcttcaataacccc
catcgggccgtggagtacctcctcactggcattcctagcagtccggtccaagagactaat
cccccagcacagcttcctgcatctgcccgcacaggcacagagacccctactgttgctgag
ggagaaaaccctctggagttcctgcgttcccagcctcagttccagagcatgaggcaggtg
atccagcagaacccctcactgctgccagctctrctccaacagctgggccgggagaaccca
cagctcctacagcaaatcagccagtaccaggagctgttcatccagatgctgaatgagccg
gcgggggaggtaggagacgtgcctgaggtgggggacctgggtgctggagtggagggagct
ccagtcaactacattcaggtcacgcctcaggagaaggaagccatcgagaggttaaaagcg
ttgggtttccctgaggcgctggtgatccaggcctactttgcctgtgaaaagaacgagaac
ctagcggccaacttcctcctgaaccagggctttgaggatgaatga
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