Salvelinus sp. IW2-2015 (Arctic char): 111980894 Help Entry 111980894         CDS       T05762                                  Name (RefSeq) protein CASC3   KO K14323   protein CASC3 Organism salp  Salvelinus sp. IW2-2015 (Arctic char) Pathway salp03013   Nucleocytoplasmic transport salp03015   mRNA surveillance pathway salp03040   Spliceosome Brite KEGG Orthology (KO) [BR:salp00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     111980894   09122 Translation    03013 Nucleocytoplasmic transport     111980894    03015 mRNA surveillance pathway     111980894  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:salp03019]     111980894 Messenger RNA biogenesis [BR:salp03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      111980894 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Btz Motif Other DBs NCBI-GeneID:  111980894 NCBI-ProteinID:  XP_023867709 LinkDB All DBs Position LG20:complement(9191344..9200421) Genome browser AA seq 780 aa AA seqDB search MISKMADRRRRRRRASQDSEEDDESGSGSESGKSLSPTTKPRVRDPEPVEAPAVRVVPKN DAESECESEDGVGEAVLSDYESADPEENGSHSEGGEEEEEEEEVVPPPAAEPKPSPAADT PAAVGELQEGGGKEEGEKGVSKEVKCEDKSNLAGERQSGDGQESTEDSENKGAKPGQKLD DDQDRNNPAYIPRKGMFFEHDVRGNAQEEERPKGRNRKLWKDEGCWEHDRFREEEQAPKS REELVAIYGYDIRNGGVSNERSYRQRKPRHSTSPVRDKRWRDGDGERPIHTSWQQGGNPN SRSAPLAVALQQSDPPPSAAPNTQRNNNPPRPSSHPPPRGFQGNRPPQAQYRNDRNQESQ RPGPKAHPAEALQTRSLPPMDGERGPRGRGNRGAHTERSPSVVVEEVRSEEDDERNTTTV TTSQSVYYNRHYSGKGDRERDSVPPPRRQEQQRGGSAPPADNPVTRDASPAPERPVEKKS YSLARRTRTRATELDKQASLEEPASTVSSSALTSEPWQGPGQSQGEAGDSSQVTVLTGLD QDLARLSLAGQNWAQNPSSFLRAEMRGIPNSMHMGGAPPQYSNIEELGAGNRAKRYSSQR QRPSPEPAPPMHIGVMESHYYEPMSYQGPIYAHGDSPAPLPPQAMLVQPEMHLPHPGHPG LHPHQSSGPMPNPALYAAPPVSMSPGQPPPQQLLAPPFYPPPGVMTFGNTNYPYPAGATL PPMYNPPAQSQVYSQSQVYGGVTYYDPMQQQAQPKPSPPRRSSQPVTVKPPPPEVGYGPE NT seq 2343 nt NT seq  +upstreamnt  +downstreamnt atgatttctaagatggcggaccggcgacggcgaaggagacgcgcgtcccaggatagcgag gaggacgatgaatctggttcgggatcggaaagtggaaagtccctttcgccaacgacaaag ccccgagtacgggatcctgagccagttgaggcaccagctgttcgtgtggtgccgaaaaac gatgctgaatccgagtgtgaaagtgaagatggcgtaggagaagctgtcctttctgactat gaaagtgcagatcctgaggagaatggctcccattcagagggaggtgaagaagaagaagaa gaggaggaggtggtccctccaccggctgcagagcccaaacccagtcctgctgctgacacc cctgctgcagtgggggaactgcaggaaggaggagggaaggaagagggtgagaaaggtgtg agtaaagaagtgaagtgtgaagataaaagcaacctggcaggggagcggcaaagcggggat ggacaggaaagcacagaagactctgagaataaaggtgctaaaccaggccagaagctggat gatgaccaggatcgtaataacccagcctatatcccccgtaagggaatgttctttgagcac gacgtcagaggaaaygcacaggaggaggaacggccgaagggtcgtaacaggaagctgtgg aaggacgagggttgctgggaacacgataggttcagggaggaggagcaggcgcctaagtca cgtgaggagctggttgcaatctacggctatgacatccgcaacggaggtgtctccaatgag cggtcctatagacagcgcaagcccagacacagcacctctccagtccgggacaagcgctgg cgggacggagacggggagaggcccatccatacctcctggcagcagggagggaaccccaac agccgtagcgctcccctagccgtggccctgcagcagtctgatcctcccccctcagcagcc cccaacacccagcgcaacaacaacccccccaggccctcctcccaccccccaccccggggc ttccagggcaaccgccccccccaggcccagtacaggaatgacagaaaccaggagtctcaa cggccaggccccaaggcccaccccgccgaggctctccagacccggagcctaccgcccatg gacggggaacgaggccccaggggccgggggaacagaggggcccatacggagcgcagccct tcggtagtggtggaagaggtccgcagtgaggaggatgatgagcgcaacacaactacagtg acaacgtcacagtccgtgtactacaatcgccactacagtggcaagggagatcgagaaagg gactctgtgccaccgccacgacgacaggagcagcagcgagggggatctgctcctccggcg gacaacccggttacccgcgatgcctccccggctccggagcggcccgtggagaagaagtcg tactccctagccaggaggactcgcacccgggccactgagctggacaagcaggcctctctt gaggagcctgcctccaccgtgtcttcctcggcactgacgagtgagccgtggcagggcccc ggtcagagccagggggaagctggagacagtagccaggtgacggtactcacagggctggac caggacctggccagactcagcctggccggacagaactgggcccagaacccatcttcgttt ctacgagctgagatgaggggcatccctaactctatgcacatgggtggagcacctccacaa tacagtaacatagaagagctgggagctggtaaccgggcaaagcggtactcgtcccagcgc cagaggccaagcccggagcccgctcctcctatgcacataggggtcatggaaagccactac tacgagcccatgtcttaccaaggaccaatctatgcccacggtgacagccccgcccccctc ccaccccaggccatgctggtccagcctgagatgcacctcccccacccaggacacccaggt ctacacccccaccagtcgagtggccccatgcccaacccggctctctacgctgctcccccc gtctccatgtcccctgggcagccccctccacagcagctgctggccccgcccttctaccct ccgccaggtgtcatgacctttgggaacaccaactacccctacccggcaggagccaccctg ccccccatgtacaacccgccggcccagtcgcaggtgtacagccagtcgcaggtgtacggt ggggtgacctactacgatccgatgcagcagcaagcccagcccaaaccctcgcctccccgg cgctcctcccagcccgtcaccgtcaaacctcccccaccagaggtagggtacggcccggag tga

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