Salvelinus sp. IW2-2015 (Arctic char): 111980919
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Entry
111980919 CDS
T05762
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00603
Glycosphingolipid biosynthesis - globo and isoglobo series
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
111980919
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
salp01003
]
111980919
Enzymes [BR:
salp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
111980919
Glycosyltransferases [BR:
salp01003
]
Glycan extension
FORS blood group (Forssman antigen)
111980919
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
111980919
NCBI-ProteinID:
XP_023867745
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Position
LG3:829632..836026
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AA seq
363 aa
AA seq
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MRFFTKIRPSITLPLVGILLLGVLVLTYCYSSFGVMKNMDVRIVEVLGLCQQDPVNFRRE
NCSCRTRDMLSPQGLLYKQPSVLMGRTNVVTVTPWLAPIVWEGTFNPLIVDSIYKPMHLS
IATTVFAVGKYVRFLRDFLETAEKHFMVDFKVRYYIFTDRREDVPAVVLAPGRNVTIIPV
PGSNRWQEISSRRMEMIQTTIENQIGKEADYIFCLDVDTKFHGRWGAETLSRLVATIHPG
YYEQTHEHYPYERRPASRAYIPAGEGDYYYGGATIAGYVRDVHKLAKYCREQLEADAANS
IEAAWQEESHLNRYLLYNKPTKILSPEYLWQDFKAKNNEVQIIRFSQVNKNYAEVRPNVK
KRK
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttttacaaaaatccgtccttccatcactctgccacttgttggaatcctactt
ttgggagtcctggttttaacatattgttactcatcatttggtgtgatgaaaaatatggat
gtcagaattgtagaagttttggggttgtgtcagcaggaccctgtcaatttcaggcgggaa
aactgtagttgtaggacccgggacatgctgtccccacagggactcctgtataagcagccc
agtgtgttaatggggcgcaccaatgtggtaactgtcaccccttggttggcaccaattgtc
tgggaaggcacctttaatcccttgattgttgacagcatttacaagcctatgcacctaagc
attgccacaaccgtctttgctgttggcaagtatgtgcgcttcctgcgtgacttcctagag
actgccgagaagcatttcatggtggacttcaaagtgcgctactacatcttcactgaccgg
agggaagacgtgccagcggtggtcctcgctcccggtagaaatgtaaccatcatcccagtc
cctggctccaaccgctggcaggagatctcctccaggaggatggagatgatccagaccacc
atcgagaaccagataggcaaggaggcggactacatcttctgcttggatgtggacacgaag
ttccacggacggtggggggcagaaacattgagcaggctggtggccactattcacccaggt
tactatgagcagacccacgagcactacccttacgaacgccgtcctgcctcgcgggcctac
atccccgcgggggaaggagactactactatggaggcgccaccatcgctggctatgttagg
gacgtgcacaagctggcaaagtactgccgtgagcagcttgaggccgatgccgccaactcc
atcgaggcggcatggcaggaggaaagccacctgaacagatatctcctttacaacaagccc
actaagattctgtctccggaatacctgtggcaggacttcaaggccaagaacaacgaggtg
caaataatccgcttctctcaggtcaacaagaactatgcagaggttcggcccaacgtgaag
aaaagaaagtaa
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