Salvelinus sp. IW2-2015 (Arctic char): 111980952
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Entry
111980952 CDS
T05762
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00512
Mucin type O-glycan biosynthesis
salp00514
Other types of O-glycan biosynthesis
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
111980952
00514 Other types of O-glycan biosynthesis
111980952
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
salp01003
]
111980952
Enzymes [BR:
salp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
111980952
Glycosyltransferases [BR:
salp01003
]
Glycan extension
Type 3 chain
111980952
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
111980952
NCBI-ProteinID:
XP_023867799
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All DBs
Position
LG20:complement(181733..187097)
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AA seq
340 aa
AA seq
DB search
MIMYKSTSKPSRLLDVMFCAGFVLGFCLCFXAIAYYRAYQISQETVLLPSRTSSLMGELP
SVHHSAVATNASVLSPLPPSPSSGRLLCWVLTSPQTLWTRAKHIVNTWGPRCDTLLFMSS
KPDLLFPGTVLALATEEGRANLYNKTMAAFNLLXDGYLDKADWFLKADDDTYVIVENLRL
LLSRFSPDKPVYLGRRFHRFVHQGYMSGGAGYVLSRESVRRYVRALHHGTCTKSTSAEDL
LLGFCLQKLGVPAGDSRDHQHRETFHPLWLGKLLCTXDXLPKWFHQYNYYPSKVGPDCCS
NSSVSFHYVEPVRMYMLDYFLYHLSPVGGHSPKLGETREE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgattatgtacaagtccacttcaaagccttccaggctcttggatgttatgttctgtgct
ggctttgtgttggggttctgtctctgtttcatrgccattgcttactacagagcatatcag
atctctcaggagacagtgctcttgccctcacggacaagcagcctcatgggtgagctccct
tcagtacaccactctgctgttgccactaatgcctcagtcctctcgccattgcccccctcc
ccctcttcgggtcgactgctctgctgggtgttgacctcaccccagactctgtggaccaga
gctaaacacatagtgaacacctgggggcctcgctgtgacacactgctcttcatgagctct
aagccggacctcctgttccctgggaccgtgctggcwctggcaacagaggagggacgggcc
aacctgtacaataagaccatggccgctttcaacttactgyatgacggttacctagacaag
gctgactggttcctcaaagctgatgatgacacctatgtaattgtggaaaacttgcgtctg
ctcctgtctcggttcagcccagacaagcctgtgtatctgggcaggcgttttcaccgcttt
gtccatcaaggctacatgagtggtggtgctggctatgtactgagccgcgagtctgtgaga
cgctacgtcagggccctgcaccatggaacctgcaccaagtccacctctgcagaggaccta
ctgctgggcttctgcctccagaagctgggagtcccggcaggggactctagagaccaccaa
cacagggaaaccttccaccccctgtggctgggtaaacttctctgtaccraagacrtactg
cccaaatggttccaccagtacaactattacccttccaaagtgggtccagactgttgctcc
aattcatctgtatccttccattacgttgagccagtcagaatgtacatgctagattacttc
ctgtaccatctcagtccagtgggtggccacagcccaaagctgggtgagaccagagaggaa
taa
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