Salvelinus sp. IW2-2015 (Arctic char): 111981086
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Entry
111981086 CDS
T05762
Name
(RefSeq) transcription factor RFX3-like isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111981086
Transcription factors [BR:
salp03000
]
Eukaryotic type
Other basic domains
RF-X
111981086
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
RFX1_trans_act
ThermoDBP-RP_arch
HisKA
Motif
Other DBs
NCBI-GeneID:
111981086
NCBI-ProteinID:
XP_023867994
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Position
LG20:57229297..57253788
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AA seq
773 aa
AA seq
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MQTPEAGADSASTVPLQTAVSVQPAGSAQQVTSQVPVQQQAQTVQQVQHVYPAQQVQYVE
ENSGVYTNGNIRTYSYSEPQLYSQNSGGSYFDTQGSSSQVSTVVSSHGMANNGGGNGGLT
MGLAGGQIISSSGAYLIGGNTMDNSAPHPAAQTTRASPATVSIEMAIETLQKTEGLSSQR
SSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNAASFGKLIRSIFMGL
RTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDMQYMALRQQPVQQKQRFKPMQKVDGVSG
ENFSGGGQHTPSAAEQTVIAQSQHHQQYLDTSRALPDFVELDLGETNVDNVSPDDIKALQ
SLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSDSVEGATITENSGVSEIEGRLPCCR
LLVLCRNEAVLKWMSSCDHLMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLNNAM
NTIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANV
QEQASWVCQCEEGVVQRLEQDFKATLQQQSSLEQWAAWLDNVVTQVLQPFEDRPSFPRAA
RQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGQTPISVM
GEFDDLNAMSPANIDKDEVSEMDSDLEEDMEESGEPLAKREKAEVEHEHQVIQVIQVGAL
EDGSNPVVGVLQPGILHSLPQPPQDHAEHILTPSAATPTIRHCSATGNTYASV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcagacccctgaggcaggcgctgactccgcctccactgtccctctccagaccgccgtg
tctgtgcagcccgcaggctccgcccagcaggtgacctctcaggtgcctgtccagcaacag
gcccagactgttcaacaggttcagcatgtatacccagcacaacaggtgcagtacgtggag
gagaacagtggcgtctataccaacgggaatatacggacatactcgtactccgagccccag
ctgtacagccagaacagtggagggagctactttgacacgcagggcagctcatcccaggtg
tccacggtggtgtcatcccatggcatggccaacaacggaggggggaacggggggctgacc
atgggtctggctggggggcagatcatcagcagctctggggcctacctcatcgggggcaac
accatggataactctgccccccacccagcagcccagaccacccgagcctccccggccact
gtgagtattgaaatggcgattgagacactccaaaagactgaaggtttatccagtcagaga
agctcgctgctcaacagccatctgcagtggctactggataactatgagacagcggagggg
gtgagtctgcctcgctccaccctctacaaccactacctgcgccactgccaggagcagaag
ttggacccggtcaacgctgcttcctttgggaaactcatccgctccatcttcatggggctc
cgcacgcgtcgcctgggcacacgagggaactcgaagtaccactactatgggatccggttg
aagccggactctcctctcaacagactgcaggaggacatgcagtacatggccctcagacag
cagcctgtccaacagaaacagaggtttaagccgatgcagaaggttgatggtgtatctggg
gagaacttctcaggcggaggccagcacacccccagtgcagcggagcagactgtcatcgca
caaagccagcaccaccagcagtacctggacacatcgcgggccctgccagactttgtggag
ctggacctgggagagactaacgtggacaacgtcagcccagatgacatcaaagctctccag
tcactctacagagagcactgtgaggccattctggatgtggtggtcaacctccaattcagt
ctaatagagaagctgtggcagactttctggcgctattctccttctgactcagtggagggc
gccaccatcacagaaaacagtggtgtgagtgagattgagggccgtctgccctgctgcaga
ctgctggtgctctgtaggaacgaggctgtgctcaagtggatgagttcctgtgaccacctg
atgtaccaggccctagtggagatcctcatccctgatgtcctcagacccatccccagtgcc
ttgactcaagccatccgcaactttgccaaaagcctggaaggctggctcaacaatgccatg
aacaccattccacagagaatgatccagaccaaggttgccgctgttagtgcctttgctcag
acgctgcgtcgctacactagtctgaaccacctggcccaggcagcacgcgccgtgctgcag
aacacctcacagatcaatcagatgctcagcgacctcaaccgcgtcgacttcgccaacgtg
caggagcaggcgtcgtgggtgtgtcagtgtgaggagggtgtggttcagaggttagagcag
gacttcaaggccaccctgcagcagcagagctcactagagcagtgggctgcctggctggac
aacgtggtgacccaggtcctacagcccttcgaggaccggcccagcttccccagggcggca
cgacagttcctgctcaagtggtctttctacagctccatggtgattcgggacctgaccctg
cgcagcgcggccagtttcggctcgttccacctgatccgcctgctctacgacgagtacatg
ttctacctggtggaacatcgcgtcgcccaggcaaccggccagacacccatcagtgtcatg
ggagaattcgatgacctcaacgccatgtcacctgctaacatagacaaagacgaggtgagt
gagatggacagtgacctggaggaggacatggaggagtctggggagccgctggccaagcgg
gagaaggctgaggtggaacatgagcaccaggtgatccaggtgattcaggtgggggctctg
gaggacggcagtaaccccgtggtgggggtgctccagccgggcatcctgcactccctgccc
cagcccccccaggaccacgctgagcacatcctcaccccttctgctgccacccccaccatc
cgccactgcagcgccaccggcaacacctacgcctccgtctga
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