Salvelinus sp. IW2-2015 (Arctic char): 111981115
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Entry
111981115 CDS
T05762
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06784
roundabout, axon guidance receptor 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111981115
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
ROBO family
111981115
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_6
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
111981115
NCBI-ProteinID:
XP_023868032
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Position
LG20:33577846..33607693
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AA seq
1173 aa
AA seq
DB search
MQVGMCLLWATWIYTWAEGSLQCQCTCLPEPGLAEGSKTQVKEHVRHRLEHQQHRPHRDR
PHRRKGSRLRAEVVEVTPLIVHHPSDVVVKVGSPATLSCRAEGTPEPSIEWLHNGQPLEM
DKLDSQSRPIVLSGGSLFFLRVVPGRRSQTQGVYACVAKNSAGKATSRNASLYIAALRED
FRVQPIDVEVAVEEVAVMNCSPPVGHPEPNVTWKKDGVPINNTDPHYTALNGKLIIAPAQ
KNDSGVYICVASNTVGVRESRAARLSVLAKPVLVLKPQDMSVGMGESAQFYCEAKGDPMP
AVEWSREQGPLPNGRYLVNPDQSLQIHYVTSQDSGRYTCTAVNDVGVVTASAQLVVEEAA
STRQRDLHRELSALRVALENVTVLTPNSNMSQVQWKLQSFPTQPHYLDGFEVLYRSLLPA
SSDWAAKRVVLPNFQTLVGPLKRGYKYEFKVRPYGSSLYGRESNTRHLGVPETVPSAPPQ
AISITMTPDHNDTVHVTWKPPPHESHNGIIKGYQVWCVQSEEQQYLNWTVDGGTYSLEIT
PLYPGKQYWVRVATVNGAGVGVQSDPHRVVIDSQRSGAPQLDSPSRDLTQVLAVLRGPVF
IGSVGALLWCILVITAVCLYRRHTRPGDHLGRGHIKAKGLYRLASEDLIIKHRMAAPDSP
WISGVWRPTLSDEKYQGLWAQSQENPGFRRTTLPITAKKDPSSLDVAVPIVPDSCGVYGT
FYVDLTGNGLKTFNSPARCPKRPHCHTTTSSHHGAVTERISQPATVVQDGQALPWKQALP
SQPKMGVLKESWENNYKQDLHAVNSAPLLSSRSQALAMRGMPYKQRLSHLPPGGRSECFK
PLASPRFLHYSASLHLEDMLPPPLPMGDTTDTHSLTSEEGSSRSTKLTVDAGSLQSVCAA
SGHHGPPTNTNTNTTGCPSYSRLSTASYCMSLDEEQDATMTSQEVAQYLELSPRAEKHST
TLENPPASSLSRTFSPTPTLGYIYGPLSSDQLEDGMTDEQEPMGPRRARFQSTPSSLCSE
WEGSLWNGWGSVSEGNMANSTRNSFISSSDGSFMNDANFARVLATVAAESMSEASFSDFS
PPASPLSALFPPARGEEEECFGELDPMPVWDWSTAWVEEMEAQYRAQYPSQAAATPACNT
WGRCRDDLHYDNRRATGGSRGEGRGGVRTTPHR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttggaatgtgtctgctctgggcgacctggatctatacctgggcggaagggtca
cttcaatgccaatgcacatgtctacctgagccgggattggccgaggggtcaaagacacag
gtcaaggagcatgtccgtcatcgattggagcaccagcagcatcggcctcatagggacagg
ccacaccggagaaaaggttccaggctgagggcggaggtagtggaggtaaccccgctgatc
gtccaccacccctcagacgtggtggtcaaggtaggcagccctgccaccctctcctgccgt
gccgaaggcacacccgagccctccatcgagtggctccacaatggccagcccctggagatg
gacaagctggacagccaatcgcggcccatcgttctgtcagggggcagcctgttcttcctc
agggtggtccctgggaggcggagtcagacacagggtgtgtacgcgtgcgtggcaaagaac
agcgcaggcaaggccaccagccgcaatgcctctctctatatcgcagctctccgtgaagac
ttccgggtgcagcccattgatgtggaggtagctgtggaggaggtggcggtgatgaactgc
agcccgccggtgggacaccccgagcccaacgttacctggaagaaagacggggtccccatc
aacaacactgacccgcattacactgcgctgaatgggaagttgatcattgccccagcccag
aagaatgactctggcgtgtacatttgtgtggcttccaacactgtgggagtaagagagagc
agggccgcccgcctttctgtcctagccaagccagtgttggtgctaaagcctcaggatatg
tcggtggggatgggggagtctgcccagttctactgcgaggctaaaggagatcccatgcct
gctgtggagtggagccgcgagcagggccctctgcccaatggcaggtatctagtgaatcct
gaccagagcctccaaatccactatgtgacgtcacaggattctgggaggtacacctgcaca
gctgtcaacgacgtgggggtggtcaccgccagcgcacagctagtggtggaggaagccgca
agtaccagacagagggaccttcacagagagttgtcggccctgcgcgtggctctggagaat
gtgacggtgctgactccaaactccaacatgtcccaagtgcagtggaagctccagtctttc
ccaacccagccacactacctggatggtttcgaggtcctctatcgctctctcctgcccgcc
agttcggactgggcggctaagagggttgttctaccaaacttccaaacactggtcggcccg
ctcaagaggggctacaagtatgagttcaaagtgcgtccctacggcagcagcctgtacggc
cgggagagcaacaccaggcacctaggtgtacctgagacagtgcctagtgccccacctcag
gccatctccataacgatgacccctgaccataatgacacggtccatgtgacctggaagcct
cccccccatgaatctcacaacggcatcatcaagggataccaggtgtggtgtgtgcagtcg
gaagagcagcagtacctgaactggacagtggacggtgggacctacagtctggaaataacc
cctctctacccagggaagcagtactgggtccgggtggcaacggtcaacggagctggcgtc
ggggtacagagtgacccccatagagtggtcatagactcccagaggtccggggccccccag
ttggacagccccagtagggacctcactcaggtcctggccgtgctgaggggcccagtgttc
attgggagtgttggcgccctcctgtggtgcatcctggtgataacggccgtctgcctgtac
cgccgccacacccggcctggcgaccacctgggacgaggccacatcaaggctaaaggtttg
tacaggttggccagtgaggacctcatcataaaacacagaatggcggccccagactctccg
tggatctcgggtgtgtggagaccgaccctgagtgacgagaagtaccagggactgtgggct
cagagccaggagaaccccggcttcagaaggactacgttgcccatcacagccaagaaggac
cccagctctctggacgtggctgtccccattgtgcccgacagctgtggtgtctacgggacg
ttctacgtggacctgacgggtaatggcctcaagaccttcaacagccctgcccgatgcccc
aagcggccccactgccacaccaccacctcctcgcatcacggcgcagtgacggagcgcatc
tcccagcctgccacagttgtccaggatggccaggcattgccatggaaacaggccttgccc
tcgcagcccaagatgggcgtgctcaaggagtcgtgggaaaataattacaagcaagatctc
catgcggtgaacagcgcccccttgctgtcgtcgaggagccaggcgctggctatgagggga
atgccttacaaacagaggctcagccacctcccaccaggtgggcgctcagagtgcttcaag
cccctggcgtcgccccgcttcctgcactactctgcctcactgcacctggaggacatgctg
ccacccccgctgcccatgggcgacaccactgacacacacagcctcacctcagaggaaggg
tccagcaggtccactaagctgactgtagatgccgggtctcttcagtctgtgtgtgctgcg
tctggtcaccacggcccccccaccaacactaacaccaacaccactggctgcccctcctat
agccgcctgtccactgcctcctattgcatgtcattggatgaggagcaggacgcaacgatg
acctcacaggaagtcgcccagtacctggaactcagccccagggccgagaagcacagcacc
acgttggagaatcctcccgcctcctccctgtctcgcaccttttcccccactcccaccctg
ggctatatctatgggcccctctcctccgaccaactggaggacgggatgactgacgaacag
gagccaatgggcccccgacgggcccggtttcagagcacgccctcgtcgctctgcagcgaa
tgggagggttcgctgtggaacggctggggctcggtgtcagagggaaacatggcgaacagc
acccgcaacagcttcatcagctcgtcggatggctcattcatgaacgacgccaactttgcc
cgcgtgctcgccactgtggccgccgagtccatgagtgaagcctccttctcagacttctct
cccccggcgtcgcccctcagtgccctgttccctccagctcgaggggaagaagaggagtgt
ttcggggagctggaccccatgcccgtttgggactggagcacagcctgggtggaggagatg
gaggcgcagtaccgtgcacagtacccctctcaggcagcagcaacccccgcttgcaacacc
tgggggcgttgccgtgacgatcttcactatgacaaccgccgagccacaggagggagtagg
ggcgaaggacgagggggggtgaggacgaccccacaccgatga
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