Salvelinus sp. IW2-2015 (Arctic char): 111981136
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Entry
111981136 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04136
Autophagy - other
salp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111981136
04136 Autophagy - other
111981136
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111981136
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111981136
03029 Mitochondrial biogenesis [BR:
salp03029
]
111981136
Peptidases and inhibitors [BR:
salp01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
111981136
Membrane trafficking [BR:
salp04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
111981136
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
111981136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Peptidase_C78
Motif
Other DBs
NCBI-GeneID:
111981136
NCBI-ProteinID:
XP_023868064
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Position
LG20:complement(915999..926946)
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AA seq
450 aa
AA seq
DB search
MNPSSPCEXQSPEGDPPDDWFHLSTMSLGTQGSDGSRDDPEEPEERGRLKSKLVSAWNNV
KYGWSFKSKARLSKTSPLTMLGQSYLLSHGVERECFRRAFATLLWLTYRRGFPQLDGSSL
TTDSGWGCMLRSGQMLLAQGLLQHLLPGTGVSLLGSRGGLKKGRRKSIVSFLESRTEVTH
RRVVSWFGDHPIAPFGLHQLVEQGTSSGKKAGDWYGPSIVAHILRKAVDAASAEVSNLTV
YVAQDCTVYIDDVVRLCERPLSEVSTGPSPAWKSVIILVPVRLGGEVLNPTYIKCVKNLL
RLECCIGIIGGKPKHSLFFVGYQDEQLLYLDPHYSQSTVDITQDNFPLESFHCKCPRKIS
FSRMDPSCTIGFYAKSQKEFELLCSAVSTALSSSTEKYPIFTIAEGQGQDGGQEDESDAP
PNSVTHILTKDKARLRRTNNSNSMDEFVLL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagttctccctgtgagmgccagagccctgagggtgaccctccagatgattgg
ttccacctttccaccatgtctctgggaacrcagggctctgatggaagccgggatgaccca
gaggaacctgaggagagaggcagactcaagtccaagttggtgtcagcatggaacaatgtc
aaatatggctggtcgttcaagtcaaaggcccgcttragcaagacctctcctctgaccatg
cttggacagtcttatctgctcagtcatggagtggagagggagtgctttcgccgggccttt
gccactctgttgtggctgacgtacaggcggggcttcccacagctggatggttcctctctg
accacagacagtgggtggggctgcatgctgcgcagtggacagatgctgctggcacagggg
ctgctgcaacacctgctgccaggtacaggagtctcgctccttgggtccagaggtggactt
aagaagggaaggaggaagagcatagtgtccttcctggagagtcggactgaggtcactcac
agacgggtggtgtcctggtttggggaccatcccatcgccccgttcgggctgcaccagctg
gtggaacagggcacaagctcagggaagaaggcaggggactggtacggcccctccatcgta
gcacacatacttcgtaaggctgttgacgcagcatcagcagaggtgtccaatctgacagtg
tatgtagcacaggactgcactgtgtacatagatgacgtggtgaggctgtgtgagagacct
ctatctgaggtctccacaggacccagtccagcctggaagtctgtcatcatcctggtccct
gtgcgcctgggaggagaagtcctcaaccccacctacatcaaatgtgtcaaaaatctcctg
aggttagaatgctgcattggaatcattggtggcaaacccaagcattctctgttctttgtt
gggtaccaagacgaacagctgctgtacttggacccccactacagccagtccacagtagat
atcacacaggataacttccccttagagtcatttcactgtaagtgtcccaggaagatctcc
ttcagtcgcatggatcccagctgcactataggcttctatgccaagagccagaaggaattt
gagttactgtgctcagctgttagcacggctctctcatcatcaacagaaaagtaccccatc
ttcaccattgcagagggtcaggggcaggatggggggcaggaggatgagagcgatgcaccc
ccaaactctgtcacccacatcttgaccaaggacaaggcgaggctgagaaggaccaataac
agcaacagcatggatgagtttgtgttattgtga
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