Salvelinus sp. IW2-2015 (Arctic char): 111981153
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Entry
111981153 CDS
T05762
Symbol
cchcr1
Name
(RefSeq) coiled-coil alpha-helical rod protein 1 isoform X1
KO
K16760
coiled-coil alpha-helical rod protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111981153 (cchcr1)
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
111981153 (cchcr1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HCR
Motif
Other DBs
NCBI-GeneID:
111981153
NCBI-ProteinID:
XP_023868082
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Position
LG20:47445885..47460851
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AA seq
874 aa
AA seq
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MERCNEDEKLNAPSDFVASKGSQRTLMPPSHFTASTQSASIIVPGTVTGRGTTPIKWVTH
ATTPPSDSGPANPWLTMAQAKQEILELHRENQRIRMLQGDCCRGTKSTEDSAHSIARSGA
RGEQASRWETEWRLDTERFRAESERLKGQVEALKEVAGRQREEMRDKETYLNRQSHEMEA
MREELYKTKTELSQVSVELVQKREDKERLSTQLEMLERKSGEEAERLRSEVERSGQETHR
LTREADTARLQAGEEAKQELQKLNKQLEESYRRHEIQLQQLTATHDTELSTVRQASSEVQ
ERLCHLSQEVTHLKCCLLEVSAEREGLKEQLSQMGNAFETQSATLQSLRNYIGQLTPERG
LEEKLTETIQTLNREKEALQVTTELLTVRLNSVNDILALQEEEMVEKTLSDPLLKAGPKG
TRVLRCWREKVFMLLVQLRSRDIELRGEKDKLHSTISSLEQEVKKEKYQSNVFQHSLQDR
TAELELERVAREAVEQDVVTTKRENTELKSWSQEAEAGLRTMTEDAQRFSQAFEAKISEV
ETVQTRLNSFGQRLTFAKRRVDTIQGLMMRKEALRRVQQATKAXNPVSERAAVTELQAEL
ASACEERDKLRQELKRTPELIESALADVREQFDSEVRQLRQAAERSRGEAQEAQAAREEA
QQRLQEAHTQLEESNLNLEQIHAQLISQKEDSDRALQERVSETEDHCAQQLRVMESQLNT
ARREHTKAVVALRQFERQAEREREQEREAQCLQSEHTKREIQDLQKLLQEKDKDRNLLLV
TVRERGLMSEYKAARTTAQQTSVALEEQQQRPSRKSNTLRAKKQPQTRDSLLSVLGDLRT
LSAAVVHSSEDDAEEEGHGDRVRHSRTRGDDSLK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggaaagatgcaacgaggatgagaagctgaatgccccgtccgattttgtggcatcaaag
ggtagtcagaggaccctgatgcccccatcccatttcaccgcaagcacccagtctgcctct
atcatagtaccagggactgtaacgggacgagggacaacaccaataaaatgggtcacccat
gccacaacacccccatcggactctggccctgccaacccatggctcaccatggctcaggcc
aaacaggaaattttagaactacacagagaaaaccagaggattcggatgttacagggagac
tgctgcagaggaacgaagtcaacagaggattctgcccactccatagcaaggtctggagcg
agaggtgagcaggcctccaggtgggagacagaatggagactggacacagagcgtttcagg
gcagagtcagagaggctgaaaggccaggtagaagcactgaaggaagttgcagggagacag
agagaggagatgagggacaaagaaacttatctgaacaggcagagccatgaaatggaggcg
atgcgggaggagttatataagactaagactgagctcagccaagtcagtgtggagctggtc
caaaagagagaggacaaagagagactcagcacccagctggagatgctggagaggaagtct
ggggaggaggctgagaggctgaggagtgaggtggagaggagcggacaggaaacccacagg
ctgaccagggaggctgatacagccaggctgcaggctggggaagaggccaagcaggagttg
cagaaactaaataagcaactggaggaatcctacaggagacatgaaatacagttgcagcag
ttgactgccacccatgacactgaattgtccacagtcagacaggcgagctctgaggtgcag
gagaggttatgtcacctgtcccaggaggtgactcatctgaagtgctgtctactggaagtg
tctgcagagagagaaggactgaaagaacaactaagccaaatgggcaatgcttttgagacc
cagtcagcaacgttgcagagtcttagaaactacattggacaacttacccctgagagaggg
ttggaagagaaactaactgaaaccattcagacactgaatagggagaaggaggctctgcag
gtgacaacagagcttctgacggtcagactcaactctgtgaacgacatattggccctacaa
gaggaggagatggtagagaagactctgtcagaccctctcctgaaagctgggcccaaaggc
actcgggttctgcgttgctggagagagaaggtcttcatgttgttggtccagcttcgctca
agggatatcgaactgaggggagaaaaggataaacttcactcaaccatctcgtctctggag
caggaggtgaagaaggagaagtaccagtccaatgtgttccagcacagcctgcaggacaga
acagctgagctggagctggagagggtggctagggaggccgtggagcaggacgtggttacg
actaagagggagaacacagagctgaagagctggagtcaggaggcagaggctggactgagg
accatgacagaggatgcccagcgattcagtcaggcatttgaggctaagatttcagaggtg
gagactgtccaaacacgtctgaacagctttggccagaggctgacctttgccaaaagaaga
gtggacacaattcaaggtctaatgatgaggaaggaggccctacggagagtgcagcaggcc
actaaagcamccaacccagtctctgagcgtgccgctgtcacagagctccaggcagagctg
gcctcggcgtgtgaggagagagacaagctcaggcaggagctcaagagaacccccgagctc
attgagagtgccctggctgatgtccgtgaacagtttgacagtgaagtgaggcagctgagg
caggctgcagagcgaagcaggggggaagcccaggaggcccaggcagccagagaggaggcc
cagcagaggctgcaggaggcccacacacagctagaggagagcaacctcaacctagagcag
atccatgcacagctgatcagccaaaaggaggacagtgacagagctctgcaggagagagtg
tctgagacagaggatcactgtgctcagcagcttagagtgatggaatctcaactcaacacg
gccagaagagaacacaccaaagcagtggtagccctgcgtcagtttgagagacaggcagag
agagagagggagcaggagagagaagcacaatgccttcagagtgaacacaccaagagagaa
atccaggatctacagaaactactgcaagaaaaggacaaggacagaaacctacttttggtg
actgtacgtgagagggggctgatgagtgagtataaggcagctcggaccacagcccagcag
acttctgtggccttggaggagcagcagcagagaccctcaaggaagagcaacactctgaga
gccaaaaaacagccacagaccagagactcgctactgtcagtgcttggggaccttcggact
ctgagtgctgcagtggtccacagctcagaagacgatgcagaggaggagggacatggggac
agggtacggcattccagaaccagaggggacgactcactaaaatga
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