Salvelinus sp. IW2-2015 (Arctic char): 111981245
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Entry
111981245 CDS
T05762
Name
(RefSeq) ran GTPase-activating protein 1 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111981245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111981245
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111981245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_NLRC3
LRR_6
LRR_TMOD-LMOD
LRR_CARMIL
LRR_NLRC4
Nop14
CobT
Radial_spoke
SDA1_dom
BUD22
Motif
Other DBs
NCBI-GeneID:
111981245
NCBI-ProteinID:
XP_023868195
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Position
LG20:complement(2539290..2544764)
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AA seq
572 aa
AA seq
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MATDAVAQLADSLAKTQVTEGELSYKGQGRKFDNAQSVEEMVKEIQEFKGLQALRLEGNT
YGVEAAQAIAKALETKSEFKYCYWSDMFTGRLRSEIPPALNSLGAALMTAGARLTVLDLS
DNAFGPDGVKGIEKLLKSTACHTLQELRLNNCGMGIGGGKILAAALTECYKQSSAQGTPL
GLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHVPQNGINHPGVTALATAMQHNPRLRV
LNLNDNTFTKKGAIAMAQALKHLRSVQVINFGDCLVRSEGAIAIAEAVTEGLPILKELNL
SFGEITGVAALLVAQSVEGKATLEKLDLNGNCLGEEGCDALREVMDGLNMGDLLGSLSDD
EGEPEEEDEDDEEEDDDEEEEDDYEEEDDDVEEEEDSSVNQVSSPPSVPRPPDAASFLCF
PSPDKLLKLGTKRALLFEQQVDVADAGKTAEAFLKISSVYNEDDEEVKSAVLDSIDAILR
KAFASPSFQGYNFVSSLLVMLGLLKSEDKVKPVHVVPGHLQALEYVVRQDYFPQDHIAVL
EAFMSRHVQALESCSSARNILKSTLEHVRPEN
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatgctgttgcacagttggccgactctctggcaaaaactcaggtgactgag
ggagagttgagttataaaggccaaggacgtaaattcgacaatgcacaatctgtggaagag
atggtgaaagagatccaggagttcaaggggttgcaagcgctcaggctggaggggaacact
tatggggtggaggcagcacaggccatcgctaaagccctggagacaaagagtgaatttaag
tactgttactggagtgacatgtttactgggcgactgcgttctgagatccctccagccctg
aactccctgggtgcggccctgatgacagcaggcgccagactgaccgtgctggacctcagt
gacaacgcctttggaccagacggggtgaagggcattgagaagttgctcaagagcactgcc
tgtcacacactgcaggaactgaggctcaacaactgcggcatgggcattggtggaggcaag
atcttagctgcagcgttgacggagtgctataagcagtccagtgcacagggcacccctctc
gggctgaaggtgttcatcgcaggcagaaaccgtctggagaacgatggggccactgccctt
gcccaggccttccagctgatgggtagtctggaggaggtgcatgtgccccagaatgggatc
aaccaccctggagtgactgctctggccactgccatgcaacacaacccccggctccgggtc
ctcaacctcaacgacaacaccttcaccaagaaaggagctatcgccatggcacaggctctg
aaacatttgcgcagtgtccaggtgataaactttggagactgcctggtgcgttccgagggg
gctatagccatcgcagaggcagtcaccgaggggcttcccatcctcaaggagctgaatctg
tcattcggggagatcacaggagtagctgcactgctggtggcacaatcagtcgagggcaaa
gccacgctggagaaactggacctaaatggtaactgcctgggggaggagggctgtgatgct
ctcagagaggtaatggatggcctgaacatgggagacctgctgggatcactcagcgacgat
gaaggggagccggaggaagaggatgaggatgatgaagaagaggatgatgatgaagaagag
gaggatgactatgaggaggaggatgatgatgtggaggaagaagaggacagcagtgtgaat
caggtttcctcccctccgtcagtgccccgacccccagatgccgcctccttcctctgcttc
ccctcccccgacaagctgctcaaactgggcaccaagagggccctgctctttgaacagcag
gtagatgtggctgatgctggtaagacagcggaggctttcctgaaaatctcctctgtgtac
aatgaggacgatgaagaggttaagagtgctgtcctagacagtattgatgcaattctcagg
aaagccttcgcaagcccctccttccaaggttacaactttgtatcatcgctgttagtaatg
ctgggactcctcaagagtgaggacaaggtgaagccggtacatgtggtgcctggtcatttg
caggcactggagtacgtcgtgcgtcaggactacttcccccaggaccacatcgctgtgctg
gaggccttcatgtcccgacacgtccaggccttggagtcgtgcagcagcgccaggaacatc
ctcaagtccacgctggagcatgtcaggcctgagaactga
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