Salvelinus sp. IW2-2015 (Arctic char): 111981289
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Entry
111981289 CDS
T05762
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-1 isoform X1
KO
K04862
voltage-dependent calcium channel beta-1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04260
Cardiac muscle contraction
salp04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111981289
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
111981289
04261 Adrenergic signaling in cardiomyocytes
111981289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111981289
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111981289
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
111981289
NCBI-ProteinID:
XP_023868271
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Position
LG20:7194332..7223638
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AA seq
481 aa
AA seq
DB search
MVQKSSMSRTPSTSTQEIQMDMFDQHPHGQGKYSKRKSRFKRSDGSTSSDTTSNSFVRQG
SADSYTSRPSDSDVSLEEDPEALRKEADLQALATLEKAKTKPVAFAVRTNVGYSSGPNDD
VPVQGMAISFEAKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLENTRLLQEQKMRQ
NRLSSSKSGGSSSLDVATGTRRPTPPGTGGPAKQKQKSMEHVPPYDVVPSMRPIILVGPS
LKGYEVTDMMQKALFDFLKHKFEGRISITRVTADISLAKRSVLNNPSKHTIIERSSTRSS
LDVLAEVQSEIERIFELARTLQLVALDADTINHPSQLAKTSLAPIIVYIKIASPKVLQRL
IKSRGKSQAKHLNVQMVAADKLAQCPPELFDIILDENQLEDACEHLADYLEAYWKATHPP
SSNPPNPLLNRTMATAALAASPEPVSNLQVQVLTSLRRNLEFWPGLDGPGAEHGKVAEHA
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggtacagaaaagtagtatgtccagracgccttcgacctcaacccaggagatccaaatg
gacatgtttgatcaacatccacacggacagggaaagtattccaaacggaagagccgcttc
aagcgctcggatggaagcacctcctctgacaccacctccaacagctttgtccggcagggc
tctgccgactcctacaccagccggccgtcggactcagatgtgtccctggaggaggaccca
gaggcgctgcggaaggaggcagacctacaggccctcgccaccctcgagaaagccaagacc
aaaccagtagccttcgctgtgcggaccaatgtgggctacagctctgggcccaacgacgac
gtcccagtgcagggcatggccatctcctttgaagccaaagacttcctacacatcaaagag
aagtacaataatgactggtggattgggcgtctggtgaaggagggctgtgaggtggggttc
atccccagtccagtcaaactggagaacacccggctactgcaggagcagaagatgagacag
aaccgcctcagctccagtaaatctggtggcagctccagcctggacgttgccacgggaaca
cgcaggcccacccctcctggcacaggtggtccagctaaacagaaacagaagtcgatggag
catgtccccccttacgacgtggtcccctccatgagacccatcattctagtggggccgtca
ctgaagggctacgaggtgacagacatgatgcaaaaggctctctttgactttctcaagcac
aagtttgagggcaggatatccatcacccgggtgaccgcagacatctccctcgccaagcgc
tcggtcctcaacaaccccagtaaacacaccatcatcgagcgctccagcacccgctccagc
ctggacgtgctggcggaggtgcagagtgaaattgagcgtatctttgagctggcccgcacc
ctgcagctggttgcgctagacgcagacaccattaaccacccctctcagctggctaagacc
tccctggctcctatcatcgtctacatcaaaatagcctcacctaaggtcctccagaggctc
attaaatcccgggggaagtcccaggccaaacacctgaacgtacagatggtggcagcagac
aagctggcccagtgcccccctgagctgtttgacatcatcctggatgagaaccagctggag
gacgcctgtgagcatctggctgactacctggaggcctactggaaggccacgcaccccccc
agcagtaacccccccaaccccctcctcaaccgcaccatggccacggccgccctggccgcc
tccccagagcccgtctccaacctgcaggtacaggtgctcacctccctgcgccgcaacctg
gagttctggcccggcctggatggccccggggccgagcatgggaaagtagccgagcacgcc
ctctaa
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