Salvelinus sp. IW2-2015 (Arctic char): 111981322
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Entry
111981322 CDS
T05762
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04137
Mitophagy - animal
salp04144
Endocytosis
salp04145
Phagosome
salp04148
Efferocytosis
salp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111981322
04145 Phagosome
111981322
04137 Mitophagy - animal
111981322
04148 Efferocytosis
111981322
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111981322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111981322
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111981322
04031 GTP-binding proteins [BR:
salp04031
]
111981322
Membrane trafficking [BR:
salp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
111981322
Endosome - Lysosome transport
111981322
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111981322
Exosomal proteins of other body fluids (saliva and urine)
111981322
Exosomal proteins of colorectal cancer cells
111981322
Exosomal proteins of bladder cancer cells
111981322
GTP-binding proteins [BR:
salp04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
111981322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
111981322
NCBI-ProteinID:
XP_023868309
LinkDB
All DBs
Position
LG20:complement(71837805..71854556)
Genome browser
AA seq
219 aa
AA seq
DB search
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPAGGAGGRAGGRPGVDLQEAAPQAGGSKCCGGN
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaggaggaccagcacggaccaacggcgcggcggccagcaacaagatctgc
cagttcaagctggtgctgctgggagagtcagcggtgggcaagtccagcttggtgctgcgc
ttcgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagacygtctgcttggatgacacaacagttaagtttgagatctgggacactgcagggcag
gaacggtatcacagcctggcccctatgtactacagaggagcgcaggctgccatcgtggtc
tatgacatcaccaacacagatacattcactcgtgcaaagaactgggtgaaggagctccaa
cgacaagccagccctaacatcgttattgcactggcagggaacaaagctgacctggccaac
aaaagagctgtggacttccaggaagcacaagcgtacgcagatgacaacagtttgctcttc
atggagacttcagccaagacggccatgaacgtcaatgagatctttatggccatagccaag
aagcttcctaagaacgagccagcgggtggagccggtggccgggccggtggtcggccagga
gtggatctgcaggaagccgccccacaggctggtggtagcaagtgctgtggtgggaactaa
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integrated database retrieval system