Salvelinus sp. IW2-2015 (Arctic char): 111981407
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Entry
111981407 CDS
T05762
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04514
Cell adhesion molecules
salp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111981407
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111981407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111981407
04090 CD molecules [BR:
salp04090
]
111981407
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
Nectin family
111981407
CD molecules [BR:
salp04090
]
Proteins
111981407
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
ig
C2-set_2
I-set
Ig_2
Keratin_assoc
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
111981407
NCBI-ProteinID:
XP_023868419
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Position
LG20:48643703..48727165
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AA seq
566 aa
AA seq
DB search
MFLPCLGNYSLHKRQHAVFIFLLYSLTGVGGSQVLVPQKVSAVLGKNVTLGCSVEVEANL
SLTQSSWERRLPTGSVTVAVYNPVFGISIPPDYVRRLSFRSPSSHDATIVLEDVGFADIG
VYTCKVATFPLGNTQASTTVSVLVEPKVYVSAGSVALIDEGNETVVATCIAERARPPAEV
SWETDLFGHSEVTLQDEANGTTSTQVHYLWQPTRHVQGHALTCVVRHPALHTDFRIPYQL
NVEYAPDIVVVGYDGDWHVGRESVQLTCKAKANPPAHHFRWIRLDGDMPEGVETLNSTLL
FLRPLQRNDSGVYRCEVANAINLRSRDLRIRIQDPPTTSMPSTTPAPVLTGSASSSTSVG
DKQRVLFTSPTLAALPPANQLGTIVGGAVGGALFLLLLLVLGGVCYLRQRQTFHGDYYTK
QYLGPSDMQKAPPQHELHPSKPANNVFVDKDREEWGDRERNHERDRERLHLHPTSTTIMN
SHNHREPERQPNGRTRAMRNGEHHDHDHLRSYPSPHQTSHARYAAPPHPLSNGSPYLSDD
CYDSGAEGDYVSHMDGSVISRREWYV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgccttgcctcgggaattactcgcttcataagagacagcatgctgtatttatt
tttcttctgtacagcttgacaggtgtggggggcagtcaggtgttggtgccccagaaggtg
agtgctgtattggggaagaacgtgacgttgggctgtagcgtggaggtggaggccaacctg
agtcttacccagagttcctgggagcgccggctgcccacaggctcggtgacggtggcggtg
tacaaccccgtgttcggtatctccatccccccggactacgttcgccgcctgtccttccgc
tcaccctcctcccatgacgccaccatcgtactggaggacgtgggcttcgccgacattgga
gtgtacacctgcaaggtggccaccttccccctgggcaacacacaggcctccaccactgtc
agcgtgctcgtggagcccaaggtgtatgtgtcggctggctcggtggctctgatcgacgag
ggcaatgaaaccgtggtggccacctgcatcgctgagcgggcccggccccccgccgaagtc
tcctgggagacggacctgtttggccattcagaggtgacgctgcaggacgaggccaacggc
accaccagcacccaggtgcactacctgtggcagcccacccgccacgtccagggtcacgcc
ctcacctgtgtggtgcgccatcctgccctgcacacagactttaggatcccctaccagctc
aacgtggagtatgccccagacattgtggtggtaggttatgatggtgactggcacgtgggc
cgcgagagcgtccagctgacctgcaaagccaaggcaaacccaccagcccaccacttcaga
tggatcagactggacggggacatgccagagggggtggagacactgaacagcacattgctg
tttctgaggcccctccaaaggaatgactctggagtctacaggtgtgaggttgccaatgcc
atcaacctacgcagcagggacctgcggatacgcatacaagatcctcccaccacctccatg
ccctccaccacccctgcgcctgtcctaactggctctgcctcctcctccacctctgtggga
gacaagcaacgggtcctcttcacctcccccaccctggcagccctgccccctgccaaccaa
ctgggcaccattgtgggtggagctgtgggcggcgccttgttcctcctgctgctgctagtg
ctgggcggggtctgttacctccgacaacgacagaccttccacggggactactacactaag
cagtacctagggccttcagacatgcagaaggctcctccacagcacgagctccacccctcc
aagcctgccaataatgtttttgtagacaaggaccgcgaggagtggggcgaccgcgaacgc
aaccacgagcgggaccgcgagcgcctccacctgcatccaacatcaacaaccatcatgaac
agccacaaccacagagagccagagcgccagcctaatggccgcacgagggcgatgagaaat
ggagaacaccatgaccacgaccacctgcgtagctaccccagcccccaccagactagccat
gccagatacgctgccccaccacacccgctgagcaacggctccccctacttgtcggatgac
tgctatgacagtggggccgagggggactatgtctctcatatggacggctcagtgatctca
cgcagggagtggtacgtctga
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