Salvelinus sp. IW2-2015 (Arctic char): 111981451
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Entry
111981451 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: Down syndrome cell adhesion molecule-like protein 1 homolog
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111981451
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
Other
111981451
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
FN3_DSCAM-DSCAML_C
V-set
Ig_VEGFR-1-like_5th
C2-set_2
VEGFR1-3_N_Ig-like
Ig_5
Pur_ac_phosph_N
Ig_6
Fn3_ROS1
Sp38
Fn3_Dep-1_3rd
ChitinaseA_N
Lit
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
111981451
NCBI-ProteinID:
XP_023868488
LinkDB
All DBs
Position
LG20:complement(48136216..48248664)
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AA seq
2047 aa
AA seq
DB search
MWLVTLLLLYSLREVHSEDVGSTRLYFVNASLQRLTYSSSVGVSLPCPAGGTPTAILRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSYIHDNDYFCTAENQAGKIRSPNIRVK
AVFREPYTVRVADQRSMRGNVAVFKCLIPTAVQEYVSVVSWERDTVSIVPGNRFFLTSFG
ALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESSPLILDSFQAGEVRAG
QSVELPCMAAGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDSGSYACEVTNSF
GSKEVSGALYVIDPLRVTLSPKSLKTGISSTLFFTCAVEGSPEYTVAWYRNTXXIXPEQH
ISXQGXHNDTLQITAAQKSHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVSAFSERVVR
PGEPFSLMCASQGAPPPSITWTLDDEPVVRDSAYKTSQYTLSDGLTVSHVNVSSPAIRDG
GVYRCAARNSAGSAEYQARINVRGSPRIREMRDITAVAGRNTFITCRVIGYPYYSIKWFK
DGMLLPDNHRQVVYENGTLRLSDVQKGMDEGTYLCSVLIQPQTSIDQTVHVTVKVPPLIQ
PFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVGIETKEFMSSLQISK
VTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDGIYGKAGVLNCSVEGYPP
PKVMWKHAKGIGNPQQYHPVPLTGRIQIMFNGSLLIRHVLEDDRGYYLCQASNGVGSDIS
KSMVLTVKIPAMITSHPNTTMAIKGQMKELNCTARGEQPIIIRWERGDTVIDAERNPRYS
ITINKKGDEVISTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREV
KERSMNLRWIQRFDGNSIITSYDIEYKNKSDTWDHKYTTRNISPTNNQANIVELHPACVY
SIRMYSYNRIGRSQPSKELTISTEEAQPDGPPMEVILQPMTSQSIRVTWRAPRKELQNGV
IRGYQIGYRENGPGSNGHYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSS
TEINATTLEDVPSQPPQNVRAISVTSXEAVITWAEPPRLTLHGVLKGYRVVFWSLFPDGE
WGEMQNITTTREQVELLRGLEKFTNYSVQVLATHRLGTGXRSNVLYIQTREDLPGPPAGI
KAVPSSPNSVVVSWLPPXKPNGVIRKYTIYCSSPGSGQPAPSEYEANPEMLFYRITHLTR
GKQYLIWASAVTTAGRGNISEKVTGGAAGKAPAKILSFGGTVTTPWVKEVRLPCSSVGEP
TPTIKWTKDSEDSTIPVTVDGQRQILSNGTLVLRSVKAEDSGYYTCTATNTLGFDTIIVN
LLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWRDVFISSSE
RSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPVFNKEQPLLTHINSTHAG
LNLQGWTSGGCPITALLLDFRPKGTWAWQSLKANATAQLFLSELREATWYELKMKACNSA
GCGNQSSQFATTDYDGSTIPPINSAQEDRDDVKKLFSIGSPVILVTLGVALLFIIRKKRK
EKRLKRLRDAKSLAEMLISKNNRSMDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQIGE
DKAVAPVTDTEFSQSVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKCVKSA
HSSRNRYSSQWTLSRPGQSQSTASARTLTSDWRTMGSHGITATESDSYSASLSQDTDKGR
NSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSDQMTTGTNDPADSM
TSLSTPSETGLCRFTASPPKPQDYDRGRPTNVAVPIPHRANKSEFCNLPLYMKTDPFFRK
QAELHDPCPAVPPREASIRSLAQRAYHTQGRHMTLDPSKQQALTLGHSGLGSLGVSSGTA
TLPQRTLTMPCSNPAATASTSSTSSNPTGSSTKMGGSRDSLLENSSSALGRLQKQGVGAY
SKSYTLV
NT seq
6144 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttactcctgctgtactctctccgggaagtacacagtgaggatgtg
ggctctaccaggctgtactttgtgaacgcatccctgcagaggctgacctactccagctcg
gtgggggtgtctctgccctgcccggcgggcggcacccccaccgccatcctgcgctggtac
ctggccaccggcgatgacatctacgacgtgccccacatccgccacgtccatgccaacggc
accctccaactctaccccttctcaccktccgccttcaactcctacatccacgacaacgac
tacttctgcaccgcagaaaaccaggctggcaagatccgaagccccaatatcagagtcaaa
gctgtgttcagggagccgtacacggtgcgtgtggcagaccagcggtccatgcggggcaac
gtggccgtgttcaagtgcctcattcccaccgccgtgcaggagtacgtcagcgtggtgtcc
tgggagagagacactgtctccatcgtcccaggtaacaggttcttcctgacgtcctttggt
gctctgtacatctcagatgtccagaaggaggatgccctctctacctaccgctgcatcacc
aagcacaaatacagtggagagacacgtcagagcaatggagccaggctgtctgtcatggac
cccaccgaatcgtctcctctcatcctggacagtttccaggcgggggaagtgcgggctggt
cagagtgtggagctcccctgcatggcagcagggtaccccagccccacggtgcgctggcta
aaggacgggcgcccgctgccctctgatgcacgctggacgcggcgcctcactggtctgacc
atcagtgacctcaggcaggaggacagcggtagctacgcctgtgaggtcaccaacagcttc
ggctcgaaggaggtgtccggagcactctatgtcatagaccccctacgagtgaccctttcc
cccaagagtctaaagacgggcatcagcagtaccctgttctttacctgtgctgtggagggt
tcmccagagtacacagtggcctggtacaggaacacagakrctataytcccagarcagcac
atctctatkcagggcrcccacaacgacaccctgcagatcacagcggctcagaagagccac
tctggggcctaccagtgcttcgcctcccgcaagggccacactgcccaggacttctctatc
atactgctggaggacggcactcctcgtatcgtgtctgccttcagtgagcgcgtggtccgc
cccggcgagcccttctccctgatgtgtgcctcccaaggagccccacccccttccatcacc
tggacactggacgacgagcctgtggtgcgagactccgcctacaaaaccagccagtacacc
ctatcagacggcctgaccgtgtcacatgtcaacgtcagcagcccggccatccgtgacggg
ggagtgtatcgctgcgccgcacgcaactcggccggtagcgccgagtaccaagcgcgcata
aacgtaagaggttctcctaggatcagggagatgcgtgacatcacggctgtggcaggaagg
aacacctttataacctgtcgtgtgattggttacccctactactctatcaagtggtttaag
gacggcatgctgctgcctgacaaccatcgccaggtggtgtatgagaatggaaccctgagg
ctgagtgatgtgcagaagggcatggacgagggtacctacctgtgtagtgtgctcatccag
ccacagacctccatcgaccagactgtccacgtcactgtgaaagtgccaccactgatccag
ccctttgatatcccctccacgtcggtgggaaagctgatgtacattgcctgcgtggtgtcg
tcaggtgacatgcccatccgcatcacctggcacaaagacgggcaactcatcgtgcctggt
tccgcctctggtgttggcatagagaccaaagaattcatgagctccttgcagatctccaag
gtgacgctgaagcacaatggcaactacacctgcattgctagcaacgccgcggcaaccgtc
agctgggagagacagctgatcgtcaccgttccccctcgcttcgtggtccagcccaacaac
caggatgggatctatgggaaggcaggagtactaaactgttctgtggagggatacccccct
cccaaagtcatgtggaaacacgccaaaggtatagggaacccccagcagtaccaccctgtg
cctctgactggtcggatccagatcatgttcaacggctccctgctgattcggcacgtccta
gaggacgaccggggatactacctctgtcaggcctccaatggagtgggctctgacatcagc
aagagcatggtcctcaccgtcaagattccagccatgatcacgtcgcaccccaacaccacc
atggccatcaagggccagatgaaggagctgaactgcacagcgcggggggagcagcccatc
atcatccgatgggagaggggcgacactgtcatcgatgctgagaggaacccccgctactcc
atcaccatcaacaagaaaggggacgaggtcatctccacactcaagctaaagccagcggag
cgcggggactcagtcttcttctcctgccatgccatcaactcatacggagaggggcgagga
ctcatccagcttacrgtgcaagagcctcctgaccctcctgagttggaggtgagagaggtg
aaggarcgcagtatgaacctgcgctggatccagaggttcgacggcaacagcatcatcacc
agctacgacatcgagtataagaacaagtctgatacttgggatcacaagtacaccaccagg
aacatctcccccactaacaaccaggctaacatcgtggagctgcaccctgcctgtgtctac
agcatccgcatgtactcctacaacaggatcggacgcagccagcctagcaaggagctcacc
atcagcactgaggaagcacaacctgatgggccccctatggaagtgatcctccaaccaatg
acgtctcagagcatacgggtcacatggagggcccccagaaaggagcttcagaacggggtg
atccgggggtaccagatcggttaccgtgagaacgggccgggcagtaacggccaytacagc
attgtggagatgaaggccacaggggacagtgaggtgtacaccctggacaacctgaagaag
tttgcccagtatggagtggtggtccaggccttcaacagggctggcactggcccctctagc
actgagatcaacgctaccacactggaggatgtgcccagccagccgccccagaatgtgcgg
gctatctcggtgacgtcagycgaagcggtgatcacgtgggcggagcccccgcgtctgacg
ctgcatggcgtgctgaagggctaccgtgtggtgttctggtccctcttccccgacggagaa
tggggagagatgcaaaacatcactacaactcgtgagcaggtggagctgctgagagggctg
gagaagtttactaactacagtgtccaggtgctggccacacacaggctggggacgggtnnc
aggagcaatgtcctgtacatccaaacccgcgaggacctcccaggtcctccagctggtatc
aaagccgtgccctcatctcccaacagtgtggtcgtgtcctggctaccccccnataaaccc
aatggtgtcatccgcaagtacaccatctactgctccagcccaggctccggacagccggct
cccagtgagtatgaggccaacccagagatgttgttctacaggatcacccatctgacccgc
ggtaaacagtacctcatctgggcctccgctgtgacaactgctggccgcggcaacatcagc
gaaaaggtcaccggtggagctgctgggaaggccccagctaagatcctgtcgttcgggggc
acagtgactactccctgggtgaaggaggtccgtctgccctgcagctcagtgggagaaccc
acccccaccatcaaatggaccaaagacagtgaggactcgactatccctgtgacggtggac
gggcagcgtcagatcctgtccaacggtactctggtgttacgttccgtcaaagctgaggat
tctgggtactacacgtgcacggctaccaacaccctgggctttgacaccatcatagtcaac
ctgctggtgcaagttcctccagaccagccccgtctgaccgtctccaccacctccacctct
tccatcacgctggcctggatccctggggacaacggaggcagttccatcagaggtttcgtc
ctgcagtactcagtggacaacacagaggagtggagggatgtgttcattagttccagtgag
cgttccttcaggctggacaacctgcgctgtgggacctggtacaaggtcaaactggcagcc
aagaacagtgtgggctcaggacgcatctctgagatcatcgaggctaagacccacggacga
gagcccgtgttcaacaaggagcagcccctgctcacccacatcaactccacccacgcgggg
ctcaacctgcagggctggaccagcggaggctgccccatcaccgctctgctgctggacttc
cgccccaagggcacgtgggcctggcagagcctgaaggccaacgccacggcccagctcttc
ctcagcgagctgcgggaggccacctggtacgagctgaagatgaaggcctgtaatagcgcc
ggctgtgggaaccaaagctcccagtttgccaccacagactatgacggcagtaccatccct
cctataaactcggcccaggaggacagggatgatgtgaagaagctgttctccatcggctct
cctgtcatcctggtcaccctgggcgtcgccctgctcttcatcatccgcaagaaacgcaag
gagaagagactcaaacgactcagagatgctaagagccttgcagagatgcttatcagtaag
aacaaccgcagcatggacaccccagtgaagggtcctccccagggccctcggctccacatc
gacatccctcgtgtccagctgctcatcgaggacaaggagggcatcaagcagataggtgag
gacaaggcagtggccccagtgacggacacagagttcagccaatcagtgaatccacagagc
ttctgcacgggtgtgtctctgcaccatcctgccctcatccagaacacagggcccttgatt
gacatgtcagacatccgccctggaaccaacccagtgtcgaggaagtgtgtgaagtcagcc
cacagctccagaaaccgctactccagccagtggaccctgagcaggccgggccagagccaa
tcaacagcctccgcaaggactctgacctctgactggcgcaccatgggctcccacggcatc
accgctaccgagagtgacagctacagcgccagcctgtcccaggatactgacaagggtcgt
aacagcatggtgtccacagagagtgcgtcgtctacgtatgaggagctggcgcgggcctac
gaacacgccaaactggaggagcacctgcagcatgccaagttcaccatcacagagtgcttc
atctccgacagctcctctgaccagatgaccacaggcaccaacgacccggccgacagcatg
acatcactcagcacgccatccgagacaggcctgtgtcgcttcaccgcctcgccacccaaa
ccccaggactacgaccgcggcagacctaccaacgtggccgtgcccatcccccaccgtgcc
aataagagtgaattctgcaacctcccgctctacatgaagacggatcctttcttccggaag
caggcagaactgcatgacccatgccctgcggtcccgcccagggaggcctccatccgcagc
ctggcacagcgggcgtaccacacccagggacgtcatatgactctggatccgtccaagcaa
caggccctgacgctaggccactctgggttgggcagtctgggcgtgagctcaggcactgcc
accctcccccagaggactctcaccatgccctgctccaaccctgcagccacagcctccacc
tccagtaccagcagcaaccccactggctccagcacaaagatggggggctccagagactca
ctgctagagaatagctcctcagcgctgggcagactgcagaagcaaggggttggggcctac
tctaagtcttacacactggtgtag
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