Salvelinus sp. IW2-2015 (Arctic char): 111981463
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Entry
111981463 CDS
T05762
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1
KO
K09655
beta-1,4-N-acetylgalactosaminyltransferase 2 [EC:2.4.1.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00601
Glycosphingolipid biosynthesis - lacto and neolacto series
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
111981463
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
salp01003
]
111981463
Glycosyltransferases [BR:
salp01003
]
Glycan extension
Sid blood group
111981463
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_5
Motif
Other DBs
NCBI-GeneID:
111981463
NCBI-ProteinID:
XP_023868508
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Position
LG20:10206143..10229290
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AA seq
480 aa
AA seq
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MGSLLEMGRCKQVLVLAIFCLSAAVMYSFIYHHSTTEEDAYQLVPQQTRAVPSTSLRQPN
CTCQGSGVLVLKDHLPKDRYDDIVKRRAEEYRKHHIRTSSSLNRLLFAPPNSPLQYPIQG
FTVAPLQKTLIPGLALHAAKRQSYTVTLSVSSGVLAIKALGEGDKEGQVEKEITVQSTSL
SDLNNLLGRITYTSTVYRMRTGDLAHFTFEHHEAVFPIVIQQTSMPVLYDIGNDINSRVT
IVTKTFLRYTELQVLISSIRTYYKDIKIIIADDSLEPQKVNGSNIEQYIMPPAQGWFAGR
NLAVSQVTTKYFLWVDDDFLFTDETKIENLVEVMEATPELDVVGGSVAGHGQFYFSLVYE
EGNGEDGGCLNRKGAVKYQPVPGFPKCSFTSGVVNLFLGRTDAVRKVGFDPRLKRVAHSE
FFMDGLGSLLVASCSHVGVGHQPKIENAKYSSFRHQQSRDVEEKLAHHFFKNHLKCIRYG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtcttctagagatgggtaggtgcaagcaggtacttgtcctagctattttctgt
ctgtcagcagcagtgatgtactccttcatataccaccatagcacaacagaagaagacgca
tatcaattagttcctcagcaaacaagagccgtaccatccaccagtctcagacaacccaat
tgcacctgtcagggaagcggagtgttggtactgaaagatcaccttccaaaagaccggtat
gatgacatagtcaaacgaagagctgaggagtacaggaagcatcatatcaggacaagctcc
agtctgaacaggcttctttttgctccacccaactcccctcttcagtatccaatccagggg
ttcactgttgcccctcttcagaagacattgataccaggtttagctctccatgcagcaaaa
agacaaagttacacggtgactctgagtgtgtccagtggtgtcctggccatcaaggccctt
ggagagggggacaaagagggacaggtagagaaagagatcactgtccagtctaccagccta
tctgacctcaacaatcttctgggacgaattacctacaccagcactgtgtatcggatgagg
actggagacttggctcacttcacgtttgaacaccatgaggctgtcttccccattgtcatc
cagcagacatcaatgcccgttttatatgacataggaaacgatatcaactcccgggtgacc
atcgtcaccaagacgtttctgagatacaccgagctgcaggtcctcatcagtagcataagg
acctattacaaggacatcaaaatcatcatcgccgacgacagcctggagccacagaaagtg
aacggctccaacattgagcagtacatcatgcccccagcacagggctggtttgctggcagg
aacctggctgtctctcaggttactaccaaatacttcctctgggtcgacgacgacttcctg
ttcacagacgaaaccaagatcgagaatctggtggaggtgatggaggccacaccagaacta
gacgtggtggggggctctgtggcgggccacggccagttctacttctctctggtgtacgag
gagggtaatggggaggacgggggttgtctgaacagaaagggtgcagtgaaataccaacct
gttccaggcttccctaaatgctccttcaccagcggggtggtcaacttattccttggtcgc
accgacgccgtgcgcaaagtgggctttgacccccggctgaagagagtggcgcattcagag
ttcttcatggatgggttggggagtttgctggttgccagctgtagtcatgtcggcgtcggc
caccaacccaaaattgaaaacgcaaagtactcgtcgttccgacatcaacaatcaagagat
gtggaagagaaactagcccaccacttcttcaagaaccacctgaaatgtatccgttatgga
tag
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