Salvelinus sp. IW2-2015 (Arctic char): 111981569
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Entry
111981569 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: bromodomain and WD repeat-containing protein 3-like
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111981569
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111981569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_DCAF12
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
111981569
NCBI-ProteinID:
XP_023868663
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All DBs
Position
LG20:complement(49051569..49078572)
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AA seq
1771 aa
AA seq
DB search
MAEEQCSQIEAELYYLIARFLQSGPCKKSAQILVEELEEYELIPKRWSWDGKQYKRNFQD
WVILNQHIPADYLLRVCQQIGPLIDKEAPPSVPGVQTLLGLGRQSLLRTAKSCSHTEWSG
TAVAALHRGRPPEPPVSFGKPPSIVSIMGARQATGTARFDHALPSYTYQHMKMHRRILGH
LSSVYCVAFDRSGRRIFTGSDDCLVKIWSTDDGRLLSTLRGHAAEISDMAVNYENTLIAS
ASCDKVIRVWCLRTCAPITVLQGHAASITSIQFCPAVKGPMRYLASTGADGMVCLWQWHS
LSMKFVDRPVKFIERSRPGVQISTSSFSCGGMFLATGGTDHVIRVYYLGSETPMKLSELD
AHMDKVVVVQFCNNSNSLRFVSGSRDGTARIWHYQQQEWKSITLDIATRLPGSAVVNGED
KTKLVPTMVAWDRGDRTVVTAVSNYLLKVWSSTTGQLLHVLSGHDDEVFVLEAHPFDRRI
MLSAGHDGNIYMWDLAKGAKIRNFFNMIEGQGHGAAFDCKFSADGQHFACTDSHGHLLIF
GFGCSRPYEKIPDQMFFHTDFRPLIRDANNFVLDEQTQQAPHLMPPPFLVDVDGNPHPTH
YQRLVPGRESCKEEHLVPQLGYMANGDGEVVEQVIGQLTADEGQGESPLDVLIRQLQNQP
DERRDQEREPEGEGAGERPEVVGSPPNVGLRRSGQVEGVRQMHHNAPRSQMATERDLLAW
SRRVVVNEVQQGVLRVMEETRRAKGEVECSIYNTERRRKPVPSSSKTEQQAPCKRSLRRT
QRKKKQTRPPPAYQTRSAGERRRVDRGRISDSQMDSDSDGEAEEQAEAINASSDGETQWQ
SDSSSSVSSSDYSDWTADAGINLQPPKRTSRRQVRPPVGSSSSEEAEGQGEEARRKQAEE
KKKPKQTKQKKPSSSLSLAGCDAEEWLPPSWIMETIPRRSPFVPQMGDELMYFRQGHQAY
VRAVHRAKAYSINPQKQPWNKLNLRDQESVKVVGIKYEVGPPTLCCLKLAFLHPISGKMT
NESFSLKYHDMPXVIDFLVLQQFYDEAKEHNWQTGVRFRSIIDDAWWFGSVEDQQPLQPE
YPDSLFQCYAVKWDNSEREKMSPWDMEPISDEAELPEEVGDGVVVTEEEVKARLYSPQEG
EWGAHSQDEDCQRVIFGINELLTLDLAKAFASPVDLRDYPLYCTVVAYPTDLSTIRRRLE
NRFYRRISALMWEVRYIEHNARTFNEPQSPIVAAAKVVTDVLLRYIGDQSCTDILDLCHK
VKTELSSGEDETAEVDVDSDTPGTSTGQQRANPSPKKRGVVLDVRAWRGQCRELLRRMMD
GPDSEPFRQPVDLFTYPDYRDIIDTPMDLGTVTEALVVGNYENPMEFAKDVRLIFSNSKA
YTPNKKSQIYTMTLSLSAFFERQIISIISDYKSAVQNQRRRSRQSVSYRKRLNSGGSSPP
TSRPSSPKGKHKSGKKATPKKSQPSSKSQSRRPSQASESSSVVVDEDSQPSSSSSSGTGS
HVGGPGADRVTRSRTTPIKNSERNRPLTNGARQSHRRRVLQEGEESGGSNSSSSSSSSSS
SLSSSSSDSDSDSESEVGKFVEGGDHDYSKAPRLKTRHKAKGKMAVSGKRRRKEEQEAEE
APERAKRARVQAEVEEEEDEEDDDEQAEDNEEEEEEEEEEEEPQPQLQREEEDDEEEPEE
EEEPEEKEESEEDDSEQGEGGTEGGQKSSSRSKSGQVNTRNQGRRTVLYNDESDEESGTT
EDPLNLGMSRSGRVRRMTEKARVSHLMGWNH
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaacagtgttcacaaatcgaagctgaattgtattacctcattgccagattt
ctccagtcgggaccgtgtaaaaaatcggcacagatcctggttgaggaactggaagagtat
gagttgatcccgaaacgatggagttgggacggcaaacaatacaaacgaaacttccaagac
tgggtgatcttgaaccagcacatcccagcagactacctgctgagagtatgccagcagatt
ggtcctctcatagacaaggaggccccacctagcgtccctggggtccagaccctcctgggc
ttgggaaggcagtctttgcttcgcacagctaaaagttgtagccacacagaatggagcgga
actgctgttgctgcgctgcaccggggtcgccccccagaaccaccagtcagctttgggaag
ccccccagcatcgtgtccatcatgggcgctcgccaggctactggcactgcccgcttcgac
catgccctgccgtcctacacctaccagcatatgaagatgcacaggcgcatcctgggccac
ctgtcctctgtgtactgtgtggccttcgaccgcagtggcagacggatatttacgggttct
gatgactgtctggtgaagatttggtccacggatgacggccggctgctgtccaccctgcgt
ggccatgcggccgagatctccgacatggcagtgaactacgagaacacgctcatagcctcg
gccagctgtgacaaggtcatccgagtgtggtgcctgcgcacctgcgcccccatcactgtg
ctgcagggccatgcagcctccatcacctccattcagttttgtccggcggtaaaaggaccg
atgcgctacctggcctccactggcgcagacggcatggtgtgtttatggcaatggcactcg
ctcagcatgaagtttgttgaccggccagtcaagttcattgagcggtcaaggcccggggtc
cagatttccacctcctccttcagctgtggtgggatgttcctggccacgggcggcactgat
catgtgatcagggtgtattacctcggctctgaaacacccatgaagctgtctgagttggat
gctcacatggacaaagttgtggtagtccagttttgtaacaacagtaacagcctgaggttt
gtgagtggcagtcgggacggcacggctaggatctggcattaccagcagcaggagtggaag
agcattactctggacatagccaccagactaccagggagtgctgttgtgaatggcgaggac
aagaccaagctggtgccgacgatggtggcctgggaccgcggtgaccgcacggtcgtcaca
gcggtctctaattacctgctcaaagtgtggagctccaccacgggccagctgctgcatgtg
ctgtctggtcatgatgatgaggtgtttgtcttggaggcccacccatttgaccgccgcatc
atgctgtctgccggtcacgacggcaacatctacatgtgggacctcgccaagggagcgaag
atccgcaacttcttcaacatgattgagggccaaggccacggtgcagcgtttgactgtaag
ttctcagctgatggacagcactttgcctgcactgactcccatggccacctgctcatcttt
ggcttcggctgcagcagaccctatgagaagattcctgatcagatgttcttccacactgac
ttccggcccctgatccgggacgccaacaactttgtcctggacgagcagacccagcaggcg
ccccacctcatgccccctcctttcctggtggacgtggacgggaacccccaccccacccac
taccagcgcctagtgcccggcagggagagctgcaaggaggagcatctggtgccccagctg
ggctacatggccaatggcgatggtgaggtggtggagcaggtgattggccagctaacggca
gatgagggtcagggagaaagcccattggatgtcctgatcagacagttgcaaaaccagccg
gatgagaggcgggaccaagagagagagcctgaaggagagggggctggtgagagaccagag
gtagtgggatcgccccctaacgtgggcctgaggaggagtggtcaggtggagggggtgcgt
cagatgcaccacaacgcccctcgcagtcagatggccacggagagggacctgctggcctgg
agcaggagggttgtggtcaacgaagtccagcaaggagtcctccgggtgatggaggagacc
agacgggccaaaggtgaggtggagtgttccatctacaacacagagaggaggaggaagcct
gtacccagttcttctaagactgagcagcaggctccttgcaagcgctccctgcggcggacc
cagaggaagaagaagcagaccagacctccaccagcgtaccagacccgctcagcaggagaa
cgtcgccgtgtggacagggggaggatctctgacagccagatggactcggacagcgatgga
gaggcagaggagcaggcagaagccatcaacgcttcctctgatggggaaacacagtggcag
agtgacagcagttccagtgtctcctccagtgactactctgattggacagctgatgcgggg
atcaacctccagccccccaagcgtaccagcagaaggcaggtgcggccgcctgttggctcc
agcagctcggaggaggcggagggccagggagaggaggccaggaggaagcaggcggaggag
aagaagaagcccaagcagaccaaacagaagaaacctagctcgtctctgtctctggctggg
tgtgatgcggaggaatggctgcccccctcctggatcatggagaccatcccccgccgctct
ccttttgtgccacagatgggtgacgagctgatgtacttcaggcagggccaccaggcctac
gtcagggcagtgcatagggccaaggcctacagtatcaatcctcagaaacagccctggaac
aagctcaacctcagggaccaggagtctgtgaaggtggttggcattaagtatgaggtgggc
cctcctaccctctgttgcctaaaacttgccttcctgcaccccatctcaggcaaaatgacc
aatgagtcattctccttaaagtaccatgacatgccgnatgtcattgatttcctggtgctc
cagcagttctatgacgaagctaaagagcacaactggcagactggtgtgcgcttccggagc
atcatcgatgacgcctggtggtttggctcggtggaggaccaacagccactccagccagag
tacccagacagcctgttccagtgctacgctgtcaagtgggataatagcgagagggagaag
atgagcccttgggacatggagcccatttctgatgaagcggagttgccagaagaggttggt
gacggggtggtggtgacagaggaggaggtgaaggctcgcctctacagcccccaggagggg
gagtggggggctcactcacaggacgaggactgccagagggtcatctttggcatcaacgag
ctgcttacactggacctggccaaggcgtttgcgtcacctgtggacctgcgggactacccc
ctctactgcactgtggtggcctaccccactgacctcagcaccatccgcagacggctggag
aaccgcttctacaggaggatctcggctctgatgtgggaagtgcgctacatcgagcacaac
gcccgcactttcaacgagccccagagccccatcgtggcagcagccaaggtggtgactgac
gtgctcctccgctacatcggggaccagagctgcacagacatcttagatctgtgccacaag
gtgaagacggagctgagcagtggagaggatgagactgctgaggtggacgtggactctgac
actccagggacatccacaggacaacagcgggccaatcccagtcctaaaaagcgtggggtt
gtgttagatgtgcgtgcgtggcggggccaatgtcgggagctgctgcggcgtatgatggac
ggccctgactctgagcccttcagacagcctgtggacctcttcacctacccagactatcga
gacatcatagacactcccatggacctggggactgttacagaggcgctggtcgtcggaaac
tacgagaaccccatggagtttgccaaagatgtccgtctcattttcagcaactccaaagca
tatacacctaacaagaagtcacagatctacaccatgaccctgagcctatcagccttcttt
gaaagacaaatcatctccatcatctccgactacaagtctgcagtccagaaccagcggagg
aggagtcgccagagtgtcagctacaggaagaggctgaacagtggaggcagctcccctccc
accagccgaccctccagtcctaaagggaagcacaagtcggggaagaaggcaacacccaaa
aaatcccagccctcatctaagagccagtctcgcaggccatctcaggcgtcggagtcgagc
agtgtggtggtggatgaggacagccagccctcgtcctcctccagctccgggacaggcagc
cacgttgggggcccaggggctgaccgtgtcactcgcagtcggaccacacccatcaagaac
tctgagcgtaacagacctctcaccaatggtgccagacagagccaccggcgaagagtgctg
caggagggggaggagtctggaggatccaatagctcctcctcttcatcatcgtcttcctca
tcattgtcctcctcctcatcagacagtgattcagacagtgagtcggaggttgggaagttc
gtggagggaggagatcacgactacagcaaagctccccgcttaaagacccgccacaaagcc
aagggcaagatggccgtttctgggaagaggaggcggaaagaagaacaggaggcggaggag
gctccagagagagccaagagagcacgagtccaggcagaagttgaggaggaggaagatgaa
gaagatgacgacgaacaagctgaagacaatgaggaggaggaggaggaagaagaagaggag
gaggagccacagccgcaactgcagagagaggaggaggatgacgaggaggagcctgaggag
gaagaggagcctgaggaaaaggaggaatcggaggaggacgactctgagcagggtgagggt
gggacggagggcggtcagaaaagcagtagccgcagtaagtctggtcaggtgaacacccgg
aaccagggccgcaggacagtgttgtacaacgacgagtcagatgaagagtcggggaccaca
gaggaccccctcaacctaggcatgtcccgctcaggacgggtacgccgcatgaccgaaaag
gcccgtgtcagccacctcatgggctggaaccactga
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integrated database retrieval system
