KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111981617
Entry
111981617         CDS       T05762                                 
Name
(RefSeq) transcription factor Sox-10
  KO
K09270  transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:salp03000]
    111981617
Transcription factors [BR:salp03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    111981617
SSDB
Motif
Pfam: Sox_N HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 111981617
NCBI-ProteinID: XP_023868753
LinkDB
Position
LG20:complement(2833146..2843331)
AA seq 494 aa
MSGEEQSLSELEMSPGVSDDGHSLSPGHSSSAAGGGDSPLPGPQPQLTGVGDDALSDVAG
GISIKSDEDDDRFPIGIREAVSQVLNGYDWTLVPMPVRVNSGSKSKPHVKRPMNAFMVWA
QAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKKPFIEEAERLRKQHKKDYPEYKYQP
RRRKNGKPGSGSEADGHSEGEVSQSHYKSLHLDVAAHVRGAGSPLADGHHLHTAGQSHSP
PTPPTTPKTELQSGKSGDGKREGGGAXGSRGGMGVGAEGGSGSGSGKPHIDFGNVDIGEI
SHEVMANMEPFDVNEFDQYLPPNGHPGIGQSAGSAAAAGSSASPYAYGISSALAVASGHS
AAWLSKQHQQHHASPLGSDPSKAQIKSEAGSGGHFAEASSGGSHVTYTPLSLPHYSSAFP
SLASRAQFAEYADHQASGSYYAHSSQASGLYSAFSYMGPSQRPLYTAITDPSSVPQSHSP
THWEQPVYTTLSRP
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgtcgggagaggagcagagtttatctgagttagaaatgagtccaggggtctcggacgac
ggtcactccttgtcaccgggtcactcctccagtgcagcaggcggaggagactcacccctg
cccggaccgcagccccagctgacgggggtcggcgacgacgccctatccgatgtagctggc
gggatttccatcaagtccgatgaagacgacgatcgctttcctattggtatccgcgaggca
gtgagccaggtgctgaacggctacgactggacactcgtacctatgcctgtgcgtgtaaac
tccggcagcaaaagcaagccgcacgtgaaaaggcctatgaacgccttcatggtgtgggca
caggccgcacggagaaaactggcagaccagtatccccacctccacaacgctgagctcagc
aaaaccctcgggaaactatggaggctcttgaatgagagtgataagaagcctttcatcgag
gaggcggagaggctgaggaagcagcacaagaaggactacccggagtacaagtaccagcca
cgccgccgcaagaacggcaaacccggctccggctctgaagctgacggccactcggagggt
gaggtcagccaatcgcactacaagagcctccacctggacgtggctgcccacgtcaggggg
gcggggtctcctctggctgatggacaccacctacatactgcaggccagagccacagccct
cctacaccacccaccacccccaagacggagctccagtctgggaagtcgggcgatgggaag
cgggagggtggtggagcaygtggctcccgtgggggaatgggggtaggagcggaaggtggc
tctggatcagggtcaggcaaaccacacattgatttcggcaacgtggacatcggtgagatc
agccacgaggtgatggccaacatggagccctttgatgtgaacgagtttgaccagtacctg
ccccccaatgggcacccggggattggacagagtgctgggtcagcggcagcagcagggtcc
tctgcatctccctatgcctacggtatctcctctgccctggccgtggccagtggacactct
gcggcgtggctatccaagcagcaccagcagcatcatgcctcacctctgggctccgacccc
tccaaggcccagattaagagtgaggccggctcggggggacactttgccgaagcatcctca
gggggttcccatgtcacctacactcccctcagcctgccccactacagctctgctttcccc
tcactggcctccagggcccagtttgcagagtatgctgaccaccaggcctcgggatcctac
tacgcccactccagccaggcctcygggctgtactctgccttctcctacatggggccctcg
cagaggcccctgtatacagccatcactgacccatccagcgtgccacagtcacacagcccc
acgcactgggagcagccggtctacaccaccctgtcgcggccctga

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