Salvelinus sp. IW2-2015 (Arctic char): 111981629
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Entry
111981629 CDS
T05762
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111981629 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111981629 (rnf43)
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111981629 (rnf43)
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111981629 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
PA
Motif
Other DBs
NCBI-GeneID:
111981629
NCBI-ProteinID:
XP_023868767
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All DBs
Position
LG20:complement(18186393..18383121)
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AA seq
860 aa
AA seq
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MTVPQRRLAGLWPWLLIAALQVVFGQTGLELAAAVETERSAPRAVIKVTLLRHEPTGKPI
TLEGLFVGGSAGSAEGKLMQSHPLSLCNTSEDERQESDFISIVKLESPERKVPQCLPLLD
KARLALERGAQAVIFDVTDDNDAALELHDSDSLPLPVVLVKAEDAEELMGLVNKNEEARV
RIDIKKEDPKWPHYDVGILLTIVLAILAIVLIFAFRYRCKSNRTWDSVHQQTMRAISRLE
TRTYSSQGCGGSQRHRGGWGSNSSSNSSPVCAICLEEFLDGQDLRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGTELSRQPQRSRLQQTPEHSQGFLHPHAHSFPQHPIPFSMRPHY
PRGPSGPYPSLGHYSSSPPLDPQTLRFLPSWPLGSGCGYIHPTEGPGRPHKAGSSCRTAG
HPLGSHYGPGSHRSCHAYHSGCPSQRNASSSRLHHIPSFAPRASEGGAHSRGGEGGSCSG
GSYRTDRSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDP
FVYYGPSLGRTGRRDSMEAGAQRPRSLDSVMNRDRGRGSPEEQPKAVFSHVHYHRHRHHH
YGEDGEREHAQGQGPGRGSDEEQGAAVAIGSGTGSPPALDKDFPVCPLKHSPCQCPKAEH
TDSREAHGHRIEGQDHELSLSPPSGPPPVLVAPAPLAAPAPCCHQDHGHGGHPHRRADRL
GGCVLDGPSVLFHQSLELQDDCSIHIHYGQGPSYCCPPPDLPMPVPFILDSGGMGALGGL
EDWACCGGPHHVVWQKRVQQAHSEPQLLGPGLGGPMDRPPPPCSRRHHGHHSPAHDRNTD
FCLYCQTLHNNQGSEEESGV
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttccccagcggcgattggccgggctctggccgtggctgctcatagcggccctg
caggtggtgttcggtcagacgggcctggagctggcggcggccgtagagacggagcgctcg
gcccccagggctgtcatcaaggtgacactgctgagacacgagcccacggggaagcccatc
actctggaagggctattcgtcggagggagcgccggctctgcagaggggaagctcatgcag
tctcaccctctgtccctgtgcaacaccagtgaagatgagcgccaggagtctgacttcatc
agcatcgtcaagctggaaagcccggagcgcaaggtgcctcagtgtctgcccctgctcgac
aaggctcgcctggcactggagagaggtgctcaggctgtcatcttcgatgtcaccgacgac
aacgacgctgctctcgagctgcatgactctgactccctgccgcttccggtggtgctggtg
aaggctgaggatgctgaagagctgatgggactggttaacaagaacgaggaggcaagagtc
cgcatcgacatcaaaaaagaggacccaaaatggccccactatgatgttggtatcttgctc
actatagtcctggctattctggccattgttttgatctttgccttccggtaccgatgcaag
tccaacagaacctgggactcagtccatcagcagaccatgcgagccatcagtcgtctggag
acgcggacgtacagctctcagggctgcgggggctcacagcgccaccgtgggggctggggg
tctaatagcagctcyaactccagccccgtctgtgccatctgtctggaggagttcctggat
ggacaggacctgaggatcatctcgtgtgctcatgagttccataaggagtgtgtggacccc
tggttgctgcagcaccgcacctgtccyctctgcatgcacaacatcatgggtacagagctg
tcacgtcagccccagaggagcagactgcagcagacccccgagcacagccagggtttcctg
cacccccacgcccactccttcccccagcaccccatccccttctccatgaggcctcactac
ccccgtggcccctccggcccctacccctccctgggccactacagcagctccccacccctg
gacccccagaccctccgcttcctccctagctggcctcttggctctggctgtggatacatc
caccctacagagggccccgggaggcctcacaaggccgggagcagctgtaggacggcaggt
caccctctggggtcccactacggccccgggtcccaccgctcctgccacgcctaccactcc
ggctgcccttcccagcgcaacgcctccagttccaggctccaccacatcccctcctttgct
ccccgcgcctccgaagggggggcccatagccgggggggcgagggaggcagctgctctggg
gggagctaccggacggatcgcagtggctacctggcagacgggccggccagtgactccagc
tctggcccctgtcacggttcatccagtgactcggtgctcaactgtaccgacgtgtccctg
cagggtgtgtacggtagctggtccacgttccgcagctccctaagcagtgactatgatccg
tttgtgtactacgggccgagtttgggacggacaggccgcagggacagcatggaggcaggg
gcccagagaccaaggtctctggactcagtgatgaacagagacagaggacgagggagccct
gaggagcagccaaaggctgtgtttagccacgtccactaccaccgccacagacaccaccac
tacggagaggacggggagcgggagcacgcccagggacaggggccaggcagggggtcagac
gaggagcagggggctgctgttgctattggctctggtactggttctcccccggctctggac
aaggacttcccagtgtgccctctgaagcacagcccctgtcagtgccctaaggcagaacac
acagacagtagggaggcccacggccacaggatagagggtcaggaccatgagcttagcctc
agccccccgtcaggccctcctcctgtcctggtagcaccagcacccttagcagccccagcc
ccctgctgccaccaggaccacggccatggaggccacccccaccggagggcagaccggctc
ggcggctgtgtcctcgacggcccctcggtgctcttccaccagagcctggaactgcaggac
gactgtagcatccacattcactacggccagggccccagctactgctgccccccgcctgac
ctgcccatgcctgtgcctttcattctggactctgggggtatgggggccctagggggccta
gaggactgggcctgctgtggagggccccaccatgtagtgtggcaaaagcgggtgcagcag
gcccactctgagccccagttgctggggccagggctggggggccctatggacagacccccg
cccccatgcagcaggcgccaccacggtcaccacagcccagcgcacgaccgcaacacagac
ttttgtttatactgccaaacattacacaacaatcagggatcagaggaggagtccggtgtg
tga
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