Salvelinus sp. IW2-2015 (Arctic char): 111981635
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Entry
111981635 CDS
T05762
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-2 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04080
Neuroactive ligand-receptor interaction
salp04082
Neuroactive ligand signaling
salp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111981635
04082 Neuroactive ligand signaling
111981635
04519 Cadherin signaling
111981635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111981635
Ion channels [BR:
salp04040
]
Ligand-gated channels
GABA-A
111981635
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
PH_24
Motif
Other DBs
NCBI-GeneID:
111981635
NCBI-ProteinID:
XP_023868778
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Position
LG20:complement(23564329..23643864)
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AA seq
477 aa
AA seq
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MVIMAPTNLASKCSTAMANASFPVKLFLWVFLFVNLPTSSIQTENDDDEVTNKTWVLTPK
VYESDVTNILNSLLDGYDNKLRPDIGVKPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQT
WYDRRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILY
TLRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSVEVGDIRSWRLYQF
SFVGLRNTSEIVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDA
VPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYFV
SNRKPSTKKDKKNKNPLLRLFSSKQTPTVDIRPRSATAIQMNNATHMQERDEEYGYECLD
GKDCTSFFCCFEDCRSGAWRHGRLQIRVAKIDSYARIGFPTAFGLFNLVYWISYLYL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggtgataatggctcctacaaatttagcatctaaatgctcgacagcgatggcgaatgct
tccttccccgtgaagctatttctctgggtgtttttattcgttaatcttcctacaagctcc
atccagactgaaaacgacgatgatgaagtgacaaacaaaacttgggtgttgactcccaaa
gtgtacgagagcgatgtcaccaacatcctaaacagcctactagatggctacgataacaaa
ctgcgaccagatataggagtcaaaccaaccgtgatccacacagacatgtttgtcaacagt
atcggcccagtaaatgctatcaatatggagtacaccatcgacatcttttttgcccagacg
tggtatgaccggagattgaagttcaacagtaccatgaaggtcctgcgtctcaacagcaac
atggtgggcaagatctggatccccgacaccttctttcgcaactccaagaaggccgatgcc
cactggatcaccacgcccaatcgcatgcttcggatctggaacgatggacggatactctac
acactgcggttgactattgatgccgagtgccagcttaaactgaacaactttccaatggat
gagcactcctgtcccctggagttttcaagctatggctaccccagagaggagatagtgtac
aagtggaagaggagctccgtggaggtgggagacatccgctcctggaggctctaccagttc
tcctttgttggcctgaggaacacctccgagatcgtcaggaccgtgtcaggagactacgtt
gttctgacagtcttcttcgacctgagcaggaggatgggttacttcaccattcagacctac
atcccctgcaccctcatcgttgtcctctcctgggtctccttttggatcaacaaggatgct
gtacctgctagaacatccttaggcattaccactgtgctgaccatgactacgctgagtacc
atagccaggaagtcgctgcctaaggtatcctacgtgacggccatggacctctttgtgtcc
gtgtgcttcatctttgttttcgccgctctgatagagtatggaacactgcactactttgtg
agcaacaggaagccaagcacaaaaaaggacaagaaaaataaaaacccgctcctccggctc
ttttcctcaaagcagacacctacggtggacatacgccctcgctcagccaccgccatccag
atgaacaacgccacccacatgcaggagcgggatgaggagtatggctacgagtgcctygac
ggcaaggactgcaccagcttcttctgctgtttcgaggactgccgctccggggcctggcgg
catgggcggttgcaratccgtgtcgccaagatagactcgtacgctcgcatcggtttcccc
accgctttcggtctctttaacctggtttactggatctcctatctctatctctag
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