KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111981708
Entry
111981708         CDS       T05762                                 
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:salp03019]
    111981708
Messenger RNA biogenesis [BR:salp03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     111981708
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 KH_N4BP1_1st Regnase_1_C zf-CCCH_2 zf-CCCH_4 ATP11
Other DBs
NCBI-GeneID: 111981708
NCBI-ProteinID: XP_023868877
LinkDB
Position
LG20:49689649..49695692
AA seq 970 aa
MVLELAVPANAGPLLHRSIQHIERIFRVRVSYGSAESNCDSANVSTSNIIIVRVGEGEED
DCTKAKDYIVSLISPAHRKRERLTLALHIQLAALKSAIEYDSQAVVEVREHVVDISGGER
NVMTAWSMVEKIKMEKHPCREEAPELTEAQQHSGESEEGSSSESESEEQHQLQLNSGGCK
RKEHFSATKPHRQLCRSPCLDRPSFSQSCTLPELRIEDTKAAAVLKHGSDKEYQTKMEFA
LKLGYSGEQVETVLNKLGAAALINDILAELVRLGNKGEPEVQASSNTGTFVSRGGPCVKE
AVSPEVSLEDDSVDPYDNLRPIVIDGSNVAMSHGNKEVFSCFGIQLAVDWFVEKGHKDIT
VFVPAWRKEQSRPDAPITDQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLACDS
DGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRP
VVPEHKKQPCPYGKKCTYGHKCKYYHPERANQPQRSVADELRAFAKLSAVKTMSEGALAK
CGTGPTTAKGDSGSEAKRVAPKRQSDPSIRSVACEPEERLSAVRKPEANSVPSLVSALSV
PTMQPAKSHGAGALNTRSASSPVPGSLQFTHSSLEHMSSVQYPHPPILVTNSHGASVTYS
EQFPKYDSVSTDHGYYSMLSDFSNMSMSSMHNVDSFCSMEHEQGXYXXNPSQHCPEPCLS
HSNSDSFSSYGELYMSSVDSSLDESIKXQQXPAQSRLQAFSHGGFHHEALTRVQSYGXEE
PKHGPXRKQSISHLAPHVQHPXVGAXSSCPGDYPLPQNVLPSQSSHPGRSLGMTRMDSIS
DSRLYESNPMRQRRPPLCREQHASWDPLPCGSESYGYHSYPLSNSLMQPCCERVMVRSMP
DKMEQIWRSPWENPPQAERHVIPEHQYQTYRNLCNIFPAFVVHSVMEKNPHLTDPQQLAA
VIVTKLRSCH
NT seq 2913 nt   +upstreamnt  +downstreamnt
atggttttggagctggcagtgcccgcaaatgcaggcccattgcttcaccgctccatccag
cacattgagcgtattttccgggtgagggtcagctacggatccgctgagtcaaactgcgac
agcgcaaatgtcagcaccagcaatataatcatagttcgtgtcggagagggcgaggaagat
gactgcaccaaggcaaaagattacatagtgtccttaatttcgccagctcaccgaaagaga
gagcgtctaacgttggctttacacatacagctggctgcgctgaagtcagccatcgagtat
gattctcaggctgtggtggaggtgagggagcatgtggtggacatctccggtggcgagagg
aacgtgatgacggcatggtcgatggtggagaagatcaaaatggagaaacacccatgcagg
gaagaggcccctgagctgactgaggcccagcagcacagtggggagtctgaggagggaagc
agctcagagagcgagtcagaggagcagcatcagctgcagctgaacagcggcggctgtaag
aggaaagagcacttcagtgccaccaagcctcaccggcagctctgtcgctctccatgcctg
gaccggcccagcttctcccagagctgcactctaccagagctccgcattgaagacaccaag
gccgctgcagtgctcaaacatggcagcgacaaggagtaccaaaccaagatggagtttgcc
ttgaagctgggatactcaggtgaacaggtggagacagtgctgaacaagttaggggctgct
gcccttatcaatgacattctggctgagcttgtaaggcttggtaataaaggagaaccggag
gttcaagccagcagtaacaccggcacgttcgtctcccgtggaggcccctgtgtcaaagag
gctgtcagtccggaggtgtcacttgaagatgattctgtggatccttatgataatctcagg
cctatcgtcattgatggatcgaatgtggcgatgagccatggaaacaaagaggttttctct
tgctttggtatccaattggctgttgattggtttgtggagaaaggacacaaagacatcaca
gtgtttgttcctgcctggaggaaagagcagtcgagacctgacgcccccattacagaccaa
gacattttgcggaagctagagaaagaaaagatcctagtgttcaccccatctagaagagtc
cagggaaggagagtggtgtgctatgatgatcgcttcatagtgaagctggcctgtgactct
gatggcattattgtgtcaaatgacaactacagggacttacagaatgagaagccagagtgg
aagaagttcatagaggagcggctgctgatgtactcgtttgtcaatgataaattcatgcca
cctgatgatcctttaggaagacatggtccaagtttagagaatttcctccgcaagcgtcct
gttgttccagagcacaaaaagcaaccctgtccatatgggaaaaaatgcacttatggacat
aagtgcaagtactatcacccagagcgtgcaaaccagcctcagcggtcagtggctgatgaa
ctgagagcgtttgccaaattgtctgctgtaaagacaatgagcgagggggccctggccaag
tgtggcactggacccaccacagctaagggggacagtggctctgaggctaaacgtgtggcc
cccaagcgccagtctgatcccagcatccgctcagtggcctgcgagccagaggagagactg
tctgctgtccgtaagcctgaggcaaattctgtgccttccctcgtgtctgccctcagtgtg
cccaccatgcagcctgccaagagccacggggctggtgccttgaacactcgatcagccagc
agcccagtacccggctccctccagttcacccacagctccctggagcacatgtctagtgta
cagtacccacacccacccatcctagtcaccaacagccatggtgcttctgtcacttacagt
gaacagtttcctaagtacgattctgtgagcacagaccacggatactactctatgcttagt
gatttttctaacatgagcatgagcagcatgcacaacgtggacagcttctgtagcatggag
catgagcargggytttatcwgkgaaatcccagccagcattgccctgagccctgcctcagc
cactctaacagtgactccttctcctcttatggggaattatacatgagctcagtggacagt
agcctggatgagagcatyaaggsycagcagwctcctgcacagagcagactkcaggccttc
tcccatgggggyttccaccacgaggccctgacccgygtgcagagctatggccktgaggag
ccraagcayggtccawgcaggaagcagtccatatcccacctggcaccgcatgtccagcac
cctgrtgttggggcckggtccagctgcccaggggactaccccttacctcagaatgtcctc
ccgtckcagtcctcgcayccgggacgctccctgggcatgacacgratggacagcatctca
gactccaggctgtacgagagtaaccccatgaggcagcgsagacccccactgtgccgcgag
cagcacgccagctgggacccgctgccctgtggcagtgagtcctatggataccattcgtac
cccctgagtaacagcctgatgcagccgtgttgtgagcgggtgatggtccgcagcatgcct
gacaagatggagcagatctggaggtctccgtgggagaacccgcctcaagccgagcgccat
gtcatcccagagcaccagtaccaaacataccgcaacctctgcaacatcttccccgctttc
gtggtgcactctgtcatggagaaaaaccctcatctaacggacccacaacaactcgctgct
gtcattgtcacgaagctgaggtcttgccattaa

DBGET integrated database retrieval system