Salvelinus sp. IW2-2015 (Arctic char): 111981791
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Entry
111981791 CDS
T05762
Name
(RefSeq) interferon regulatory factor 1
KO
K09444
interferon regulatory factor 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
111981791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111981791
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
111981791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
111981791
NCBI-ProteinID:
XP_023869000
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Position
LG20:complement(24974174..24978571)
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AA seq
312 aa
AA seq
DB search
MPVSRMRMRPWLEEKIESNSISGLVWMDKDNKIFSIPWKHAARHGWDLNKDACLFKQWAM
HTGKFIQGETKPDPKTWKANFRCAMNSLPDIEEVKDKSINRGSGAVRVYKMKNVYSKPSN
KRSKANNVKKNNKGSQIKTEGMAYSETNCPEDLNTNTHLQEDSMTQESIVDSTDNLGDFA
FAPECSSSVEIGPDSTNNFYPSFQVSPDHPTDYEDSHQETLIEMTQHWEQGSVNDKGFLT
NEAGTAESFDTAESYHSPESQWSDNSGAEIELRLYTELISGLPIIDDILSYTDYCSLNSN
TSSYHQQITCPL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtctaggatgagaatgaggccttggttggaggaaaagattgagtccaactcc
atcagtggattggtgtggatggacaaggacaataagattttctccatcccttggaagcat
gctgcacgtcacggatgggacttgaacaaggacgcgtgtctgttcaagcaatgggccatg
cacacagggaaattcatacaaggcgagactaaaccagaccctaagacatggaaggctaat
ttccgctgtgcaatgaactcccttcctgacatagaggaagtgaaagacaaaagcatcaac
agagggagtggagcggtgcgcgtctacaaaatgaagaacgtctactctaagccaagtaac
aagaggtcaaaagcgaacaatgtaaagaaaaataacaaggggtcacagatcaagacagag
ggaatggcgtacagcgaaaccaattgccccgaggacctcaataccaacacacacctgcag
gaggacagtatgacacaggaaagcatagtagacagcacagacaacctaggtgattttgca
tttgctccagagtgttccagcagtgtggaaataggcccagacagcaccaacaacttctac
ccatctttccaagtgtcaccagaccaccccacagactatgaagacagtcaccaagaaacc
cttattgagatgacacagcattgggagcaaggcagtgtaaacgacaaggggttcctgacc
aatgaagcgggcacagcagagtccttcgacactgcagagtcttaccacagtccagagagc
caatggagtgataactcaggggcggaaatagagctgcgcctgtacacagaactcatctca
ggactaccgatcattgacgacatcctctcttacaccgactactgttcactgaacagcaac
acatccagttatcaccaacagatcacgtgcccactctga
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