Salvelinus sp. IW2-2015 (Arctic char): 111981844
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Entry
111981844 CDS
T05762
Name
(RefSeq) uncharacterized protein LOC111981844 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111981844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111981844
Membrane trafficking [BR:
salp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
111981844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
MIC19_MIC25
DUF4635
Motif
Other DBs
NCBI-GeneID:
111981844
NCBI-ProteinID:
XP_023869077
LinkDB
All DBs
Position
LG20:complement(17287806..17319938)
Genome browser
AA seq
1546 aa
AA seq
DB search
MMSLIELNDDQRWVPTHVNVTVLCARGLRTKGKHGSRYVYTIIQVGKEKYTTGLVEKATV
PEWNEECCFELLPGILEAGGRSAFPSGSGDLVLTVMHRVLIGLDVFLGQAIVPLDKIFQD
GMCPRDEWLKLNSKASRKEKERGEIQVTVQFTRNNMTASMFDLTMKDKPRSTFGKLKDRV
TGRKRGDVESSSAIVPGRFAALSSSLGQPFGEGRGGEDPGEVEVAEEKRSKVKDFFLGKG
KLRRSSDTRSCSSLASESSVSSTTSESHCPPSLGLGLLVDPPSSPIYSSKVKDTHHGDTD
LAKKVLTTTQSSPKILTHKRAFSDEASRITTTAIPRPCPAVESLKGQGMALSQSSLCING
SHVYGSEPVGPKGSSTLPSKLVLLEKCSPLSRSLQNLTKRSEDKGSAGEGRRWSFDKVKK
DEKDEEKEAEPPVSQFQSARVGGRPVQAAAPMLSSTTTVDSADKGKKLRKTLFSGGRSDS
LPAKPELSQGSPPPEGRLRGWFGSSDSQNKPRLEVSPKVESESDTPPPLPPRSPIPLQCS
SPSASFTGHASPDSAHPTNPFTPSLTPDPISPFNPFLPRMQCNPFFEDLIAEEGQRSPPL
ATCSPVTPLCHSTALPCVPSPTHDPVVQIEMAAIWRDRPRPVARQTSLPALLPTAATASP
PNPFTSRSISESGGGEWDESFDAFASSRLNSPKGSATNHPSIATSRQAQVRSTPPYESYT
IPPIEEMRMSEEEEPPPLPPRRPIIRTLVNERPSDSWLHRGQELAVQKEACLLSQTGAAS
LQHTREWGHKRHTPSPHLYPSPGKDLVSSDLLDFHTVHSQHYANMSPESPSPFKSEDEFK
KFDYEPLRDEDDKIRFTEQDLWPDATDSIISLASEDTTDASPTVRKYAIVKNTSHSELKD
LPLPVMLLNSEMTVADLLNKSSPKHSKSGLKTLDIASTTPDPTTDSFSIHPDKPKSRNNN
YESPPLTLEDLNKNKRNSDFCFIDSASDASPSPSDMMTVHTLKSLGGIFPQTPQDTPIAL
SHEQMMLYAEDMLIFQKTSTIDVNSAVKVNLPEVSSLCQDNCQDGGCELNTSRRDSASDM
KSISIFTPDSLNIERETVELKDTQSPMDRNGNMTKSKIDRSKLDPSCHVRSFPVSHQMEM
QQEVVRNKQEVSQPLAKQTNPVNESSPRGTSSHRSLKGMIRELHGNSGANSPGKGLGESP
LHRSPSPGQIISESIEGPFSYQPTKSPFSSPLSPNRETALNVATLFVSLQTINTNSSTQS
IPKGNCLTEHSSSKYAGTISFEDLHAKVAPNVRSPMSARLRPGITVHASNPCASIPSSAT
PSLATETNGQAKLPPTPVPSSIHHPPTVRPSTGASATLAVAPYTSSSFSSSSSFSSSSSY
TTAQPLVDARHTLLPEETQPASSLPRQESSPHPVKPLTTTASQGEKKEGRSVLEKLKSSI
HPGRSAQQTLAVAETEKKIEESLADSSAQYEQLTNMELISLLLQQEMDMEKQQVASDQQA
SMLEKHEAELKKIKAQVRDLEDYIDKLLVQIMEQTPTLLQVRSRHK
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcacttatagagttgaacgatgaccagagatgggtgcctacacatgtgaatgta
actgtcctttgtgcaaggggtttgcggacgaagggcaagcacgggagccgttatgtttac
accatcattcaggttgggaaggagaaatacaccaccggtttggtcgaaaaggcgactgtg
ccagagtggaatgaggaatgttgtttcgaacttctccccggaatactggaggctgggggt
cgcagtgcatttccctcagggagcggcgacttggtcctcacggtcatgcaccgggtgctt
atcggacttgacgtgtttcttggtcaagcaatcgtccctctggataaaatatttcaagat
ggaatgtgtcccagagatgaatggctcaaactcaactccaaggccagccggaaggagaag
gagcgtggcgagatacaggtaacggtccagttcacgcgcaacaacatgacggccagcatg
ttcgaccttaccatgaaggacaagccgcgctctactttcggcaaactcaaggaccgcgtg
acagggaggaagaggggcgacgtggagtcctcctcggctattgtgccgggacgcttcgcc
gccctgtcgagttccctggggcagccattcggggaggggagagggggagaggaccccggg
gaggtagaggtagccgaggagaagcggagcaaggtgaaggattttttcctgggtaaggga
aagctgcggaggtcctctgacacgaggtcgtgttcgtcgctggcctcagaaagcagcgta
tcatccacgaccagtgagagccactgccccccttctctgggtctaggcctcctggtggac
ccccccagctcccccatctacagcagcaaggtcaaagacacccaccatggagatacagac
ctagctaaaaaagtgcttaccaccacacagtcttccccaaagatactgacccacaagcga
gccttcagcgacgaggcgagtaggatcaccacgactgccattccccggccctgtcctgct
gtggagtccctcaagggtcaaggtatggctctctcccaatcctctctgtgcatcaatgga
agccacgtctatggatctgaaccggtgggtcccaagggctcaagcacccttccatccaag
ctggtcctgctcgagaagtgctcccctctctctcgttcgctgcagaacctcacaaagcgg
agcgaggacaagggttccgcaggcgagggccggcgctggtccttcgacaaggtaaagaag
gacgagaaggatgaggagaaggaggccgaacctccagtctcccagtttcaaagtgctcgg
gtggggggtcggccggtgcaggcagcagccccgatgctgtcttctactaccacggtggac
tcagcagacaaagggaagaagctcagaaaaacgttattctccggagggaggagtgattct
ctacctgccaagcccgagctgagccagggttctcctccccctgaggggagactgcgaggc
tggtttggctccagtgactcccagaacaagccaaggctggaagtttctcctaaggtagaa
agcgaatcagacacccctcctcctctcccccctcgctcccccattcccctccagtgctcg
tctccctctgcttctttcactggccatgcctcgcccgacagtgcccatccaactaacccc
ttcactccctctctgacccctgaccccatctctcccttcaaccccttcctcccgcgtatg
cagtgtaaccccttttttgaggacctcattgcagaagagggccagaggtccccccccctt
gctacctgctcccccgtcacacccctctgtcattccacagctttgccttgcgtccccagt
cccacccacgatcccgtcgtgcaaattgaaatggccgccatatggcgagaccggcccagg
cctgtagccaggcagacgtccctccctgccttacttccgacagcagcgacggctagcccc
cccaatccgtttacgtctcgctccatatcagagagtgggggaggagaatgggatgagtcc
tttgacgcctttgcctccagcaggctgaattcaccaaagggctctgctaccaatcaccct
tcaatagcaacctcaaggcaagcccaagtaagaagcactcctccatatgagagttacact
attccacccattgaggagatgaggatgagtgaagaagaagagcctccaccattgcctcca
cggaggcccataatacggactctggtgaacgagagaccctctgacagctggttgcacagg
ggtcaggaactggctgtgcagaaagaggcctgtctcctgtcacaaacaggcgcagcttcc
ctacagcacacaagagaatgggggcacaagagacacacaccaagtccccacctgtaccca
agcccaggcaaagaccttgtcagcagtgacctgttggactttcataccgtacactcacaa
cattatgccaacatgtctccagagtctccatctccattcaagtctgaagatgagttcaag
aagtttgactatgaaccattacgagatgaagatgataaaattagatttactgagcaggac
ttatggccagatgcaacagattcaataatatcgttggcctcagaggatacaacggacgcc
agtcccactgtaagaaaatatgctattgtaaagaacacttcacattctgaactcaaagac
ttacctctgccagtaatgcttcttaatagtgaaatgactgtagccgatctactgaataag
tcttccccaaaacactctaaatcaggtcttaagacgctggacattgcttcaactacacca
gacccaacaacggactcgttctcaattcacccagataagcccaagtccagaaacaacaat
tatgaatcacctccgctaaccttagaagatcttaataaaaacaaaagaaactccgatttt
tgttttattgactctgcttctgatgcttccccatctccatctgacatgatgacagtgcat
accctcaaaagtttaggtggcatttttcctcaaactccacaagatactcccatagcatta
tctcatgagcagatgatgctatatgcagaagatatgttaatttttcagaagactagtaca
atagacgtcaactctgctgtaaaagtgaatttaccagaagtctcctcgctttgtcaagac
aattgtcaagatggaggttgtgaattgaatacatcacgcagagattctgcaagcgatatg
aagagcattagcatttttacgcctgacagtcttaacatagagagagagactgtagaatta
aaagacactcaatctccaatggatagaaatggcaacatgacaaaatcaaagatagaccgt
tcaaaactagacccttcatgtcatgttagatcttttccagtttcgcaccagatggaaatg
caacaggaagttgtacgcaataaacaggaagtgagtcagcctctggccaaacaaaccaat
cctgtcaatgagtcttcaccaaggggcactagttctcacagaagtctcaagggaatgata
cgagagctccacggcaacagtggtgcaaatagccctggcaaaggattaggtgagagccct
cttcaccgatcaccgtctcctggacaaataatctcagagagcattgaaggaccgttctca
tatcaacccaccaaatctcctttttcctcacctttgtcaccgaatagagagacagcgctc
aatgtagctacattatttgtgtccttgcaaacaataaacacaaatagttccactcagtca
attccaaaaggaaactgcttaacggaacattcctcgtccaaatatgctgggacgatcagc
tttgaagacctccacgccaaagtagccccgaacgtgagaagccccatgagtgccaggtta
aggcctggcatcacagtgcatgcttccaacccctgtgcttccatcccctcctctgctacc
ccctccctggcaactgaaactaatggccaggctaagctgccccccacccctgtcccctcc
tccatacatcaccccccgaccgtgaggcccagtaccggagccagtgccaccttggctgtg
gccccctacacctcttcctccttctcctcctcttcctccttctcctcctcttcctcctac
accactgcccagcccttggtcgatgcacggcacacacttttgcctgaggagacacagcca
gctagcagcctgccccgacaggagagcagcccccacccagtgaagcccttgaccaccaca
gccagtcagggggagaagaaagagggccggtcagttctggagaagctcaagtcttccatc
catccaggccgctctgcccagcagacactggccgtggctgagactgagaagaagattgag
gaatcgttagcagacagctctgcccagtacgagcagctgacaaacatggagctgatttcc
cttctgctgcagcaggagatggatatggagaagcagcaggtggcctctgaccagcaggcg
tcgatgctggagaaacacgaggcggagctgaagaagatcaaggcacaggtgcgcgaccta
gaggactacatcgacaagctgctggtgcagatcatggagcagacacccacactcctccaa
gtgcgctcccggcacaagtga
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